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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OINW] human gut metagenome; human gut
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182461803
OINW01000282
[OINW] human gut metagenome; human gut
30
118
+
Ser
GGA
[ENA]
¢þ
>WENV182461892
OINW01006956
[OINW] human gut metagenome; human gut
50
125
+
Val
TAC
[ENA]
¢þ
>WENV182461824
OINW01000896
[OINW] human gut metagenome; human gut
56
128
+
Thr
GGT
[ENA]
¢þ
>WENV182461839
OINW01001817
[OINW] human gut metagenome; human gut
69
144
+
Lys
CTT
[ENA]
¢þ
>WENV182461797
OINW01000164
[OINW] human gut metagenome; human gut
92
4
-
Ser
GGA
[ENA]
¢þ
>WENV182461889
OINW01006330
[OINW] human gut metagenome; human gut
102
186
+
Leu
CAG
[ENA]
¢þ
>WENV182461850
OINW01002372
[OINW] human gut metagenome; human gut
104
33
-
Gln
TTG
[ENA]
¢þ
>WENV182461898
OINW01007338
[OINW] human gut metagenome; human gut
118
194
+
Pro
GGG
[ENA]
¢þ
>WENV182461900
OINW01007691
[OINW] human gut metagenome; human gut
133
57
-
Ile2
CAT
[ENA]
¢þ
>WENV182461881
OINW01005736
[OINW] human gut metagenome; human gut
135
62
-
His
GTG
[ENA]
¢þ
>WENV182461869
OINW01005006
[OINW] human gut metagenome; human gut
144
219
+
Asn
GTT
[ENA]
¢þ
>WENV182461905
OINW01008497
[OINW] human gut metagenome; human gut
157
82
-
Lys
CTT
[ENA]
¢þ
>WENV182461812
OINW01000470
[OINW] human gut metagenome; human gut
165
92
-
Thr
CGT
[ENA]
¢þ
>WENV182461897
OINW01007097
[OINW] human gut metagenome; human gut
165
240
+
Gly
CCC
[ENA]
¢þ
>WENV182461843
OINW01001955
[OINW] human gut metagenome; human gut
167
77
-
Ser
GGA
[ENA]
¢þ
>WENV182461885
OINW01005928
[OINW] human gut metagenome; human gut
172
98
-
Arg
TCT
[ENA]
¢þ
>WENV182461819
OINW01000701
[OINW] human gut metagenome; human gut
182
256
+
Ile
GAT
[ENA]
¢þ
>WENV182461899
OINW01007402
[OINW] human gut metagenome; human gut
226
314
+
Ser
CGA
[ENA]
¢þ
>WENV182461813
OINW01000532
[OINW] human gut metagenome; human gut
228
301
+
Pro
CGG
[ENA]
¢þ
>WENV182461858
OINW01002669
[OINW] human gut metagenome; human gut
230
303
+
Lys
TTT
[ENA]
¢þ
>WENV182461805
OINW01000314
[OINW] human gut metagenome; human gut
231
157
-
Arg
CCG
[ENA]
¢þ
>WENV182461893
OINW01006956
[OINW] human gut metagenome; human gut
236
311
+
Asn
GTT
[ENA]
¢þ
>WENV182461904
OINW01008497
[OINW] human gut metagenome; human gut
252
177
-
Lys
TTT
[ENA]
¢þ
>WENV182461864
OINW01003282
[OINW] human gut metagenome; human gut
252
177
-
His
GTG
[ENA]
¢þ
>WENV182461902
OINW01007836
[OINW] human gut metagenome; human gut
260
333
+
Gly
GCC
[ENA]
¢þ
>WENV182461878
OINW01005438
[OINW] human gut metagenome; human gut
266
178
-
Ser
GCT
[ENA]
¢þ
>WENV182461820
OINW01000701
[OINW] human gut metagenome; human gut
273
347
+
Ala
TGC
[ENA]
¢þ
>WENV182461845
OINW01002231
[OINW] human gut metagenome; human gut
290
372
+
Leu
TAG
[ENA]
¢þ
>WENV182461842
OINW01001934
[OINW] human gut metagenome; human gut
313
238
-
Thr
TGT
[ENA]
¢þ
>WENV182461894
OINW01006956
[OINW] human gut metagenome; human gut
314
388
+
Gln
CTG
[ENA]
¢þ
>WENV182461826
OINW01000951
[OINW] human gut metagenome; human gut
317
226
-
Ser
GCT
[ENA]
¢þ
>WENV182461848
OINW01002258
[OINW] human gut metagenome; human gut
329
253
-
Met
CAT
[ENA]
¢þ
>WENV182461849
OINW01002335
[OINW] human gut metagenome; human gut
331
248
-
Leu
TAG
[ENA]
¢þ
>WENV182461863
OINW01003282
[OINW] human gut metagenome; human gut
341
265
-
Arg
TCT
[ENA]
¢þ
>WENV182461888
OINW01006321
[OINW] human gut metagenome; human gut
361
437
+
Val
GAC
[ENA]
¢þ
>WENV182461880
OINW01005736
[OINW] human gut metagenome; human gut
366
295
-
Gln
TTG
[ENA]
¢þ
>WENV182461818
OINW01000682
[OINW] human gut metagenome; human gut
367
452
+
Ser
TGA
[ENA]
¢þ
>WENV182461891
OINW01006907
[OINW] human gut metagenome; human gut
368
443
+
Val
TAC
[ENA]
¢þ
>WENV182461877
OINW01005438
[OINW] human gut metagenome; human gut
372
289
-
Ser
TGA
[ENA]
¢þ
>WENV182461851
OINW01002399
[OINW] human gut metagenome; human gut
383
455
+
Arg
CCG
[ENA]
¢þ
>WENV182461895
OINW01006956
[OINW] human gut metagenome; human gut
394
469
+
Lys
TTT
[ENA]
¢þ
>WENV182461903
OINW01008480
[OINW] human gut metagenome; human gut
396
471
+
Pro
TGG
[ENA]
¢þ
>WENV182461847
OINW01002258
[OINW] human gut metagenome; human gut
406
331
-
Thr
GGT
[ENA]
¢þ
>WENV182461890
OINW01006399
[OINW] human gut metagenome; human gut
430
355
-
Ala
CGC
[ENA]
¢þ
>WENV182461884
OINW01005856
[OINW] human gut metagenome; human gut
431
360
-
Glu
TTC
[ENA]
¢þ
>WENV182461882
OINW01005829
[OINW] human gut metagenome; human gut
442
367
-
Val
GAC
[ENA]
¢þ
>WENV182461868
OINW01004762
[OINW] human gut metagenome; human gut
448
362
-
Leu
CAG
[ENA]
¢þ
>WENV182461876
OINW01005438
[OINW] human gut metagenome; human gut
448
374
-
Glu
TTC
[ENA]
¢þ
>WENV182461862
OINW01003282
[OINW] human gut metagenome; human gut
449
373
-
Pro
TGG
[ENA]
¢þ
>WENV182461887
OINW01006051
[OINW] human gut metagenome; human gut
458
384
-
Gln
TTG
[ENA]
¢þ
>WENV182461856
OINW01002562
[OINW] human gut metagenome; human gut
469
393
-
Ile2
CAT
[ENA]
¢þ
>WENV182461896
OINW01006956
[OINW] human gut metagenome; human gut
475
549
+
Glu
TTC
[ENA]
¢þ
>WENV182461872
OINW01005286
[OINW] human gut metagenome; human gut
481
406
-
Lys
TTT
[ENA]
¢þ
>WENV182461789
OINW01000011
[OINW] human gut metagenome; human gut
488
416
-
fMet
CAT
[ENA]
¢þ
>WENV182461861
OINW01003204
[OINW] human gut metagenome; human gut
506
421
-
Ser
TGA
[ENA]
¢þ
>WENV182461846
OINW01002258
[OINW] human gut metagenome; human gut
511
435
-
fMet
CAT
[ENA]
¢þ
>WENV182461901
OINW01007732
[OINW] human gut metagenome; human gut
520
445
-
Ala
CGC
[ENA]
¢þ
>WENV182461833
OINW01001335
[OINW] human gut metagenome; human gut
526
610
+
Leu
GAG
[ENA]
¢þ
>WENV182461875
OINW01005438
[OINW] human gut metagenome; human gut
542
465
-
Ile2
CAT
[ENA]
¢þ
>WENV182461871
OINW01005192
[OINW] human gut metagenome; human gut
549
473
-
Met
CAT
[ENA]
¢þ
>WENV182461874
OINW01005423
[OINW] human gut metagenome; human gut
554
479
-
Trp
CCA
[ENA]
¢þ
>WENV182461873
OINW01005310
[OINW] human gut metagenome; human gut
558
634
+
Arg
ACG
[ENA]
¢þ
>WENV182461838
OINW01001665
[OINW] human gut metagenome; human gut
563
491
-
Arg
CCT
[ENA]
¢þ
>WENV182461866
OINW01004365
[OINW] human gut metagenome; human gut
581
655
+
Pro
TGG
[ENA]
¢þ
>WENV182461886
OINW01006051
[OINW] human gut metagenome; human gut
583
500
-
Leu
TAG
[ENA]
¢þ
>WENV182461865
OINW01004363
[OINW] human gut metagenome; human gut
595
671
+
Pro
CGG
[ENA]
¢þ
>WENV182461883
OINW01005856
[OINW] human gut metagenome; human gut
599
523
-
Met
CAT
[ENA]
¢þ
>WENV182461808
OINW01000335
[OINW] human gut metagenome; human gut
609
696
+
Ser
GCT
[ENA]
¢þ
>WENV182461867
OINW01004740
[OINW] human gut metagenome; human gut
612
536
-
Asp
GTC
[ENA]
¢þ
>WENV182461834
OINW01001335
[OINW] human gut metagenome; human gut
617
694
+
Gln
CTG
[ENA]
¢þ
>WENV182461870
OINW01005192
[OINW] human gut metagenome; human gut
630
554
-
Ala
TGC
[ENA]
¢þ
>WENV182461879
OINW01005736
[OINW] human gut metagenome; human gut
637
566
-
Gln
CTG
[ENA]
¢þ
>WENV182461830
OINW01001136
[OINW] human gut metagenome; human gut
657
584
-
Phe
GAA
[ENA]
¢þ
>WENV182461827
OINW01000991
[OINW] human gut metagenome; human gut
662
734
+
Glu
TTC
[ENA]
¢þ
>WENV182461857
OINW01002665
[OINW] human gut metagenome; human gut
705
630
-
Thr
CGT
[ENA]
¢þ
>WENV182461840
OINW01001818
[OINW] human gut metagenome; human gut
732
657
-
Phe
GAA
[ENA]
¢þ
>WENV182461816
OINW01000667
[OINW] human gut metagenome; human gut
759
834
+
Ala
GGC
[ENA]
¢þ
>WENV182461852
OINW01002487
[OINW] human gut metagenome; human gut
763
838
+
Gly
GCC
[ENA]
¢þ
>WENV182461796
OINW01000156
[OINW] human gut metagenome; human gut
790
716
-
Thr
TGT
[ENA]
¢þ
>WENV182461860
OINW01003142
[OINW] human gut metagenome; human gut
808
884
+
Asn
GTT
[ENA]
¢þ
>WENV182461823
OINW01000814
[OINW] human gut metagenome; human gut
834
918
+
Leu
CAA
[ENA]
¢þ
>WENV182461828
OINW01001084
[OINW] human gut metagenome; human gut
839
764
-
Glu
TTC
[ENA]
¢þ
>WENV182461817
OINW01000667
[OINW] human gut metagenome; human gut
843
918
+
Glu
TTC
[ENA]
¢þ
>WENV182461859
OINW01002970
[OINW] human gut metagenome; human gut
844
932
+
Ser
GGA
[ENA]
¢þ
>WENV182461844
OINW01002060
[OINW] human gut metagenome; human gut
846
770
-
Arg
CCG
[ENA]
¢þ
>WENV182461829
OINW01001136
[OINW] human gut metagenome; human gut
851
924
+
Pro
CGG
[ENA]
¢þ
>WENV182461853
OINW01002487
[OINW] human gut metagenome; human gut
896
986
+
Leu
TAA
[ENA]
¢þ
>WENV182461822
OINW01000787
[OINW] human gut metagenome; human gut
901
828
-
Phe
GAA
[ENA]
¢þ
>WENV182461821
OINW01000763
[OINW] human gut metagenome; human gut
925
1008
+
Tyr
GTA
[ENA]
¢þ
>WENV182461837
OINW01001595
[OINW] human gut metagenome; human gut
949
866
-
Tyr
GTA
[ENA]
¢þ
>WENV182461854
OINW01002512
[OINW] human gut metagenome; human gut
1024
948
-
Arg
ACG
[ENA]
¢þ
>WENV182461809
OINW01000335
[OINW] human gut metagenome; human gut
1050
1124
+
Glu
CTC
[ENA]
¢þ
>WENV182461855
OINW01002539
[OINW] human gut metagenome; human gut
1063
981
-
Leu
CAA
[ENA]
¢þ
>WENV182461841
OINW01001911
[OINW] human gut metagenome; human gut
1169
1082
-
Ser
TGA
[ENA]
¢þ
>WENV182461787
OINW01000003
[OINW] human gut metagenome; human gut
1331
1260
-
Gln
TTG
[ENA]
¢þ
>WENV182461832
OINW01001310
[OINW] human gut metagenome; human gut
1418
1344
-
Thr
GGT
[ENA]
¢þ
>WENV182461835
OINW01001537
[OINW] human gut metagenome; human gut
1424
1499
+
Gly
CCC
[ENA]
¢þ
>WENV182461836
OINW01001564
[OINW] human gut metagenome; human gut
1441
1366
-
Arg
CCT
[ENA]
¢þ
>WENV182461825
OINW01000896
[OINW] human gut metagenome; human gut
1449
1522
+
Trp
CCA
[ENA]
¢þ
>WENV182461831
OINW01001310
[OINW] human gut metagenome; human gut
1604
1519
-
Tyr
GTA
[ENA]
¢þ
>WENV182461811
OINW01000420
[OINW] human gut metagenome; human gut
2002
2076
+
Pro
GGG
[ENA]
¢þ
>WENV182461815
OINW01000603
[OINW] human gut metagenome; human gut
2007
1933
-
Ala
GGC
[ENA]
¢þ
>WENV182461799
OINW01000182
[OINW] human gut metagenome; human gut
2065
2140
+
Lys
TTT
[ENA]
¢þ
>WENV182461810
OINW01000400
[OINW] human gut metagenome; human gut
2091
2165
+
Met
CAT
[ENA]
¢þ
>WENV182461814
OINW01000581
[OINW] human gut metagenome; human gut
2260
2187
-
fMet
CAT
[ENA]
¢þ
>WENV182461800
OINW01000231
[OINW] human gut metagenome; human gut
2453
2528
+
Ala
TGC
[ENA]
¢þ
>WENV182461801
OINW01000231
[OINW] human gut metagenome; human gut
2532
2608
+
Ile
GAT
[ENA]
¢þ
>WENV182461807
OINW01000326
[OINW] human gut metagenome; human gut
2770
2854
+
Leu
CAA
[ENA]
¢þ
>WENV182461794
OINW01000113
[OINW] human gut metagenome; human gut
2984
2902
-
Leu
TAG
[ENA]
¢þ
>WENV182461798
OINW01000175
[OINW] human gut metagenome; human gut
3523
3596
+
Trp
CCA
[ENA]
¢þ
>WENV182461806
OINW01000321
[OINW] human gut metagenome; human gut
3573
3645
+
Arg
CCT
[ENA]
¢þ
>WENV182461802
OINW01000251
[OINW] human gut metagenome; human gut
3691
3615
-
Val
TAC
[ENA]
¢þ
>WENV182461804
OINW01000305
[OINW] human gut metagenome; human gut
3958
3882
-
Ile
GAT
[ENA]
¢þ
>WENV182461791
OINW01000026
[OINW] human gut metagenome; human gut
4406
4480
+
Asp
GTC
[ENA]
¢þ
>WENV182461790
OINW01000021
[OINW] human gut metagenome; human gut
4728
4653
-
His
GTG
[ENA]
¢þ
>WENV182461788
OINW01000007
[OINW] human gut metagenome; human gut
4733
4807
+
Ile2
CAT
[ENA]
¢þ
>WENV182461795
OINW01000117
[OINW] human gut metagenome; human gut
5594
5667
+
Phe
GAA
[ENA]
¢þ
>WENV182461793
OINW01000051
[OINW] human gut metagenome; human gut
6697
6622
-
Pro
GGG
[ENA]
¢þ
>WENV182461792
OINW01000030
[OINW] human gut metagenome; human gut
6747
6675
-
Glu
TTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK