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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OITJ] human gut metagenome; human gut
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182497140
OITJ01000491
[OITJ] human gut metagenome; human gut
4
78
+
Arg
CCT
[ENA]
¢þ
>WENV182497141
OITJ01000591
[OITJ] human gut metagenome; human gut
18
95
+
Asn
GTT
[ENA]
¢þ
>WENV182497154
OITJ01001151
[OITJ] human gut metagenome; human gut
28
103
+
Ile2
CAT
[ENA]
¢þ
>WENV182497155
OITJ01001151
[OITJ] human gut metagenome; human gut
118
194
+
Asp
GTC
[ENA]
¢þ
>WENV182497135
OITJ01000095
[OITJ] human gut metagenome; human gut
141
70
-
Glu
TTC
[ENA]
¢þ
>WENV182497153
OITJ01001128
[OITJ] human gut metagenome; human gut
145
217
+
Pro
TGG
[ENA]
¢þ
>WENV182497151
OITJ01001025
[OITJ] human gut metagenome; human gut
145
218
+
Ile
GAT
[ENA]
¢þ
>WENV182497134
OITJ01000095
[OITJ] human gut metagenome; human gut
227
156
-
Asn
GTT
[ENA]
¢þ
>WENV182497160
OITJ01003089
[OITJ] human gut metagenome; human gut
254
181
-
fMet
CAT
[ENA]
¢þ
>WENV182497136
OITJ01000209
[OITJ] human gut metagenome; human gut
273
364
+
Ser
CGA
[ENA]
¢þ
>WENV182497131
OITJ01000009
[OITJ] human gut metagenome; human gut
294
219
-
Lys
CTT
[ENA]
¢þ
>WENV182497145
OITJ01000855
[OITJ] human gut metagenome; human gut
300
214
-
Leu
AAG
[ENA]
¢þ
>WENV182497157
OITJ01001247
[OITJ] human gut metagenome; human gut
321
238
-
Tyr
GTA
[ENA]
¢þ
>WENV182497150
OITJ01001018
[OITJ] human gut metagenome; human gut
337
261
-
His
GTG
[ENA]
¢þ
>WENV182497152
OITJ01001029
[OITJ] human gut metagenome; human gut
344
419
+
Ile2
CAT
[ENA]
¢þ
>WENV182497158
OITJ01001687
[OITJ] human gut metagenome; human gut
393
322
-
Glu
TTC
[ENA]
¢þ
>WENV182497149
OITJ01001018
[OITJ] human gut metagenome; human gut
421
346
-
Arg
TCT
[ENA]
¢þ
>WENV182497156
OITJ01001247
[OITJ] human gut metagenome; human gut
438
364
-
Thr
TGT
[ENA]
¢þ
>WENV182497142
OITJ01000612
[OITJ] human gut metagenome; human gut
441
514
+
Gly
GCC
[ENA]
¢þ
>WENV182497159
OITJ01003089
[OITJ] human gut metagenome; human gut
450
378
-
Thr
TGT
[ENA]
¢þ
>WENV182497144
OITJ01000640
[OITJ] human gut metagenome; human gut
457
537
+
Leu
TAG
[ENA]
¢þ
>WENV182497146
OITJ01000980
[OITJ] human gut metagenome; human gut
472
397
-
Lys
TTT
[ENA]
¢þ
>WENV182497148
OITJ01000985
[OITJ] human gut metagenome; human gut
480
404
-
Ile
GAT
[ENA]
¢þ
>WENV182497143
OITJ01000612
[OITJ] human gut metagenome; human gut
520
594
+
Asp
GTC
[ENA]
¢þ
>WENV182497147
OITJ01000985
[OITJ] human gut metagenome; human gut
559
484
-
Ala
TGC
[ENA]
¢þ
>WENV182497137
OITJ01000415
[OITJ] human gut metagenome; human gut
596
684
+
Ser
TGA
[ENA]
¢þ
>WENV182497139
OITJ01000453
[OITJ] human gut metagenome; human gut
678
603
-
Arg
CCT
[ENA]
¢þ
>WENV182497138
OITJ01000415
[OITJ] human gut metagenome; human gut
719
812
+
Ser
GCT
[ENA]
¢þ
>WENV182497133
OITJ01000079
[OITJ] human gut metagenome; human gut
1922
1850
-
Ala
TGC
[ENA]
¢þ
>WENV182497129
OITJ01000007
[OITJ] human gut metagenome; human gut
2607
2681
+
Ile
GAT
[ENA]
¢þ
>WENV182497130
OITJ01000007
[OITJ] human gut metagenome; human gut
2698
2772
+
Ala
TGC
[ENA]
¢þ
>WENV182497132
OITJ01000029
[OITJ] human gut metagenome; human gut
2907
2831
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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