This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OITO] human gut metagenome; human gut
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182498480
OITO01001465
[OITO] human gut metagenome; human gut
68
153
+
Leu
TAA
[ENA]
¢þ
>WENV182498512
OITO01006341
[OITO] human gut metagenome; human gut
69
153
+
Leu
CAA
[ENA]
¢þ
>WENV182498501
OITO01004035
[OITO] human gut metagenome; human gut
89
15
-
His
GTG
[ENA]
¢þ
>WENV182498533
OITO01009406
[OITO] human gut metagenome; human gut
135
60
-
Val
TAC
[ENA]
¢þ
>WENV182498530
OITO01008928
[OITO] human gut metagenome; human gut
147
61
-
Leu
TAA
[ENA]
¢þ
>WENV182498504
OITO01004516
[OITO] human gut metagenome; human gut
154
79
-
Thr
CGT
[ENA]
¢þ
>WENV182498472
OITO01001254
[OITO] human gut metagenome; human gut
157
85
-
Arg
CCG
[ENA]
¢þ
>WENV182498515
OITO01006910
[OITO] human gut metagenome; human gut
162
75
-
Ser
GGA
[ENA]
¢þ
>WENV182498509
OITO01005565
[OITO] human gut metagenome; human gut
165
241
+
Arg
TCT
[ENA]
¢þ
>WENV182498516
OITO01006995
[OITO] human gut metagenome; human gut
176
252
+
Asp
GTC
[ENA]
¢þ
>WENV182498505
OITO01004650
[OITO] human gut metagenome; human gut
191
267
+
Arg
CCG
[ENA]
¢þ
>WENV182498473
OITO01001289
[OITO] human gut metagenome; human gut
206
279
+
Thr
CGT
[ENA]
¢þ
>WENV182498520
OITO01007552
[OITO] human gut metagenome; human gut
215
141
-
Arg
CCT
[ENA]
¢þ
>WENV182498532
OITO01009406
[OITO] human gut metagenome; human gut
222
147
-
Phe
GAA
[ENA]
¢þ
>WENV182498465
OITO01000892
[OITO] human gut metagenome; human gut
230
302
+
Pro
TGG
[ENA]
¢þ
>WENV182498529
OITO01008928
[OITO] human gut metagenome; human gut
233
160
-
Cys
GCA
[ENA]
¢þ
>WENV182498525
OITO01008081
[OITO] human gut metagenome; human gut
277
371
+
SeC
TCA
[ENA]
¢þ
>WENV182498503
OITO01004294
[OITO] human gut metagenome; human gut
278
205
-
Ala
TGC
[ENA]
¢þ
>WENV182498508
OITO01005242
[OITO] human gut metagenome; human gut
309
235
-
Gly
TCC
[ENA]
¢þ
>WENV182498531
OITO01009406
[OITO] human gut metagenome; human gut
315
227
-
Ser
TGA
[ENA]
¢þ
>WENV182498536
OITO01009520
[OITO] human gut metagenome; human gut
337
262
-
Val
TAC
[ENA]
¢þ
>WENV182498524
OITO01007941
[OITO] human gut metagenome; human gut
352
277
-
Asn
GTT
[ENA]
¢þ
>WENV182498528
OITO01008928
[OITO] human gut metagenome; human gut
362
287
-
Gly
GCC
[ENA]
¢þ
>WENV182498526
OITO01008658
[OITO] human gut metagenome; human gut
391
466
+
Trp
CCA
[ENA]
¢þ
>WENV182498535
OITO01009520
[OITO] human gut metagenome; human gut
415
341
-
Glu
TTC
[ENA]
¢þ
>WENV182498502
OITO01004294
[OITO] human gut metagenome; human gut
454
379
-
Ile
GAT
[ENA]
¢þ
>WENV182498510
OITO01005733
[OITO] human gut metagenome; human gut
464
390
-
Ala
GGC
[ENA]
¢þ
>WENV182498527
OITO01008928
[OITO] human gut metagenome; human gut
474
399
-
Gly
GCC
[ENA]
¢þ
>WENV182498454
OITO01000743
[OITO] human gut metagenome; human gut
482
396
-
Leu
CAG
[ENA]
¢þ
>WENV182498499
OITO01003442
[OITO] human gut metagenome; human gut
486
577
+
Ser
GGA
[ENA]
¢þ
>WENV182498493
OITO01002629
[OITO] human gut metagenome; human gut
497
573
+
Pro
CGG
[ENA]
¢þ
>WENV182498534
OITO01009520
[OITO] human gut metagenome; human gut
498
426
-
Asn
GTT
[ENA]
¢þ
>WENV182498494
OITO01002701
[OITO] human gut metagenome; human gut
511
584
+
Lys
CTT
[ENA]
¢þ
>WENV182498497
OITO01003034
[OITO] human gut metagenome; human gut
516
587
+
Gln
TTG
[ENA]
¢þ
>WENV182498518
OITO01007140
[OITO] human gut metagenome; human gut
522
449
-
Ala
CGC
[ENA]
¢þ
>WENV182498522
OITO01007801
[OITO] human gut metagenome; human gut
535
442
-
Ser
GCT
[ENA]
¢þ
>WENV182498514
OITO01006508
[OITO] human gut metagenome; human gut
558
633
+
Phe
GAA
[ENA]
¢þ
>WENV182498496
OITO01002923
[OITO] human gut metagenome; human gut
563
636
+
Trp
CCA
[ENA]
¢þ
>WENV182498513
OITO01006466
[OITO] human gut metagenome; human gut
595
520
-
Ile2
CAT
[ENA]
¢þ
>WENV182498495
OITO01002701
[OITO] human gut metagenome; human gut
608
681
+
Lys
CTT
[ENA]
¢þ
>WENV182498519
OITO01007170
[OITO] human gut metagenome; human gut
629
554
-
Gly
CCC
[ENA]
¢þ
>WENV182498523
OITO01007896
[OITO] human gut metagenome; human gut
632
561
-
Gln
TTG
[ENA]
¢þ
>WENV182498517
OITO01007110
[OITO] human gut metagenome; human gut
650
725
+
Arg
TCT
[ENA]
¢þ
>WENV182498521
OITO01007715
[OITO] human gut metagenome; human gut
655
567
-
Ser
GGA
[ENA]
¢þ
>WENV182498451
OITO01000699
[OITO] human gut metagenome; human gut
716
791
+
Pro
GGG
[ENA]
¢þ
>WENV182498498
OITO01003307
[OITO] human gut metagenome; human gut
755
681
-
Ala
GGC
[ENA]
¢þ
>WENV182498511
OITO01006204
[OITO] human gut metagenome; human gut
762
678
-
Leu
TAA
[ENA]
¢þ
>WENV182498506
OITO01004700
[OITO] human gut metagenome; human gut
775
701
-
Arg
TCT
[ENA]
¢þ
>WENV182498486
OITO01002255
[OITO] human gut metagenome; human gut
778
859
+
Leu
TAG
[ENA]
¢þ
>WENV182498492
OITO01002439
[OITO] human gut metagenome; human gut
809
737
-
Glu
CTC
[ENA]
¢þ
>WENV182498439
OITO01000245
[OITO] human gut metagenome; human gut
822
740
-
Leu
CAA
[ENA]
¢þ
>WENV182498471
OITO01001130
[OITO] human gut metagenome; human gut
828
907
+
Leu
CAA
[ENA]
¢þ
>WENV182498482
OITO01001529
[OITO] human gut metagenome; human gut
831
755
-
Trp
CCA
[ENA]
¢þ
>WENV182498490
OITO01002344
[OITO] human gut metagenome; human gut
864
790
-
Cys
GCA
[ENA]
¢þ
>WENV182498507
OITO01004956
[OITO] human gut metagenome; human gut
922
849
-
Pro
CGG
[ENA]
¢þ
>WENV182498446
OITO01000363
[OITO] human gut metagenome; human gut
941
869
-
Arg
CCT
[ENA]
¢þ
>WENV182498489
OITO01002344
[OITO] human gut metagenome; human gut
969
894
-
Gly
GCC
[ENA]
¢þ
>WENV182498491
OITO01002439
[OITO] human gut metagenome; human gut
974
887
-
Ser
GCT
[ENA]
¢þ
>WENV182498488
OITO01002344
[OITO] human gut metagenome; human gut
1074
999
-
Phe
GAA
[ENA]
¢þ
>WENV182498438
OITO01000238
[OITO] human gut metagenome; human gut
1089
1164
+
Val
GAC
[ENA]
¢þ
>WENV182498500
OITO01003848
[OITO] human gut metagenome; human gut
1158
1233
+
Ile2
CAT
[ENA]
¢þ
>WENV182498455
OITO01000744
[OITO] human gut metagenome; human gut
1196
1270
+
Glu
CTC
[ENA]
¢þ
>WENV182498456
OITO01000744
[OITO] human gut metagenome; human gut
1274
1349
+
Lys
CTT
[ENA]
¢þ
>WENV182498474
OITO01001309
[OITO] human gut metagenome; human gut
1278
1351
+
Pro
CGG
[ENA]
¢þ
>WENV182498476
OITO01001367
[OITO] human gut metagenome; human gut
1281
1209
-
Glu
TTC
[ENA]
¢þ
>WENV182498487
OITO01002255
[OITO] human gut metagenome; human gut
1304
1221
-
Leu
GAG
[ENA]
¢þ
>WENV182498462
OITO01000853
[OITO] human gut metagenome; human gut
1371
1297
-
Ala
TGC
[ENA]
¢þ
>WENV182498443
OITO01000320
[OITO] human gut metagenome; human gut
1386
1313
-
Thr
CGT
[ENA]
¢þ
>WENV182498459
OITO01000823
[OITO] human gut metagenome; human gut
1419
1347
-
Thr
GGT
[ENA]
¢þ
>WENV182498461
OITO01000853
[OITO] human gut metagenome; human gut
1476
1400
-
Ile
GAT
[ENA]
¢þ
>WENV182498468
OITO01001066
[OITO] human gut metagenome; human gut
1594
1668
+
Thr
TGT
[ENA]
¢þ
>WENV182498458
OITO01000823
[OITO] human gut metagenome; human gut
1618
1535
-
Tyr
GTA
[ENA]
¢þ
>WENV182498484
OITO01002005
[OITO] human gut metagenome; human gut
1678
1605
-
Gln
CTG
[ENA]
¢þ
>WENV182498479
OITO01001382
[OITO] human gut metagenome; human gut
1711
1636
-
Thr
GGT
[ENA]
¢þ
>WENV182498485
OITO01002075
[OITO] human gut metagenome; human gut
1786
1859
+
Arg
CCT
[ENA]
¢þ
>WENV182498478
OITO01001382
[OITO] human gut metagenome; human gut
1792
1718
-
Gly
TCC
[ENA]
¢þ
>WENV182498483
OITO01001966
[OITO] human gut metagenome; human gut
1797
1712
-
Tyr
GTA
[ENA]
¢þ
>WENV182498475
OITO01001343
[OITO] human gut metagenome; human gut
1820
1747
-
Gly
GCC
[ENA]
¢þ
>WENV182498477
OITO01001382
[OITO] human gut metagenome; human gut
1871
1796
-
Thr
TGT
[ENA]
¢þ
>WENV182498481
OITO01001508
[OITO] human gut metagenome; human gut
1935
2010
+
His
GTG
[ENA]
¢þ
>WENV182498442
OITO01000302
[OITO] human gut metagenome; human gut
2061
1989
-
Arg
CCT
[ENA]
¢þ
>WENV182498447
OITO01000384
[OITO] human gut metagenome; human gut
2154
2078
-
Val
TAC
[ENA]
¢þ
>WENV182498464
OITO01000890
[OITO] human gut metagenome; human gut
2159
2233
+
Met
CAT
[ENA]
¢þ
>WENV182498470
OITO01001104
[OITO] human gut metagenome; human gut
2208
2135
-
Gly
CCC
[ENA]
¢þ
>WENV182498460
OITO01000831
[OITO] human gut metagenome; human gut
2226
2151
-
Thr
GGT
[ENA]
¢þ
>WENV182498469
OITO01001078
[OITO] human gut metagenome; human gut
2244
2172
-
Cys
GCA
[ENA]
¢þ
>WENV182498463
OITO01000856
[OITO] human gut metagenome; human gut
2261
2334
+
fMet
CAT
[ENA]
¢þ
>WENV182498467
OITO01001043
[OITO] human gut metagenome; human gut
2302
2228
-
Ile2
CAT
[ENA]
¢þ
>WENV182498452
OITO01000707
[OITO] human gut metagenome; human gut
2315
2390
+
Pro
TGG
[ENA]
¢þ
>WENV182498450
OITO01000644
[OITO] human gut metagenome; human gut
2404
2477
+
Phe
GAA
[ENA]
¢þ
>WENV182498453
OITO01000707
[OITO] human gut metagenome; human gut
2426
2501
+
Pro
TGG
[ENA]
¢þ
>WENV182498457
OITO01000774
[OITO] human gut metagenome; human gut
2440
2369
-
Gln
CTG
[ENA]
¢þ
>WENV182498466
OITO01001028
[OITO] human gut metagenome; human gut
2874
2801
-
Lys
TTT
[ENA]
¢þ
>WENV182498449
OITO01000423
[OITO] human gut metagenome; human gut
2966
2878
-
Ser
GGA
[ENA]
¢þ
>WENV182498440
OITO01000258
[OITO] human gut metagenome; human gut
3382
3307
-
Glu
TTC
[ENA]
¢þ
>WENV182498437
OITO01000227
[OITO] human gut metagenome; human gut
3519
3435
-
Leu
CAA
[ENA]
¢þ
>WENV182498445
OITO01000357
[OITO] human gut metagenome; human gut
3547
3476
-
Glu
TTC
[ENA]
¢þ
>WENV182498448
OITO01000408
[OITO] human gut metagenome; human gut
3595
3680
+
Ser
TGA
[ENA]
¢þ
>WENV182498444
OITO01000357
[OITO] human gut metagenome; human gut
3715
3639
-
Met
CAT
[ENA]
¢þ
>WENV182498434
OITO01000063
[OITO] human gut metagenome; human gut
3912
3838
-
Ile2
CAT
[ENA]
¢þ
>WENV182498441
OITO01000267
[OITO] human gut metagenome; human gut
4410
4339
-
Gln
TTG
[ENA]
¢þ
>WENV182498436
OITO01000196
[OITO] human gut metagenome; human gut
4952
5026
+
Asn
GTT
[ENA]
¢þ
>WENV182498435
OITO01000132
[OITO] human gut metagenome; human gut
5490
5408
-
Leu
TAG
[ENA]
¢þ
>WENV182498433
OITO01000034
[OITO] human gut metagenome; human gut
7111
7038
-
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK