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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIUS] human gut metagenome; human gut
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182504155
OIUS01008299
[OIUS] human gut metagenome; human gut
5
79
+
Cys
GCA
[ENA]
¢þ
>WENV182504146
OIUS01006400
[OIUS] human gut metagenome; human gut
63
135
+
Thr
GGT
[ENA]
¢þ
>WENV182504117
OIUS01003603
[OIUS] human gut metagenome; human gut
80
5
-
Gly
CCC
[ENA]
¢þ
>WENV182504110
OIUS01002954
[OIUS] human gut metagenome; human gut
87
162
+
Val
TAC
[ENA]
¢þ
>WENV182504165
OIUS01010250
[OIUS] human gut metagenome; human gut
87
163
+
Pro
TGG
[ENA]
¢þ
>WENV182504057
OIUS01000078
[OIUS] human gut metagenome; human gut
89
161
+
Arg
CCT
[ENA]
¢þ
>WENV182504096
OIUS01001601
[OIUS] human gut metagenome; human gut
97
25
-
Asn
GTT
[ENA]
¢þ
>WENV182504156
OIUS01008299
[OIUS] human gut metagenome; human gut
103
178
+
Glu
TTC
[ENA]
¢þ
>WENV182504115
OIUS01003370
[OIUS] human gut metagenome; human gut
125
49
-
Val
CAC
[ENA]
¢þ
>WENV182504144
OIUS01005492
[OIUS] human gut metagenome; human gut
126
211
+
Tyr
GTA
[ENA]
¢þ
>WENV182504102
OIUS01002064
[OIUS] human gut metagenome; human gut
148
57
-
Ser
GGA
[ENA]
¢þ
>WENV182504158
OIUS01008605
[OIUS] human gut metagenome; human gut
192
120
-
Gly
GCC
[ENA]
¢þ
>WENV182504125
OIUS01003627
[OIUS] human gut metagenome; human gut
208
134
-
Lys
TTT
[ENA]
¢þ
>WENV182504116
OIUS01003578
[OIUS] human gut metagenome; human gut
214
140
-
Gly
TCC
[ENA]
¢þ
>WENV182504108
OIUS01002592
[OIUS] human gut metagenome; human gut
218
289
+
Glu
TTC
[ENA]
¢þ
>WENV182504152
OIUS01007567
[OIUS] human gut metagenome; human gut
229
302
+
Ala
TGC
[ENA]
¢þ
>WENV182504160
OIUS01009733
[OIUS] human gut metagenome; human gut
230
305
+
Asp
GTC
[ENA]
¢þ
>WENV182504114
OIUS01003295
[OIUS] human gut metagenome; human gut
260
182
-
His
GTG
[ENA]
¢þ
>WENV182504157
OIUS01008407
[OIUS] human gut metagenome; human gut
283
208
-
Lys
TTT
[ENA]
¢þ
>WENV182504124
OIUS01003627
[OIUS] human gut metagenome; human gut
295
221
-
Phe
GAA
[ENA]
¢þ
>WENV182504154
OIUS01007781
[OIUS] human gut metagenome; human gut
299
374
+
Ala
TGC
[ENA]
¢þ
>WENV182504164
OIUS01009922
[OIUS] human gut metagenome; human gut
308
384
+
fMet
CAT
[ENA]
¢þ
>WENV182504093
OIUS01001592
[OIUS] human gut metagenome; human gut
310
384
+
Ile2
CAT
[ENA]
¢þ
>WENV182504161
OIUS01009733
[OIUS] human gut metagenome; human gut
311
386
+
Phe
GAA
[ENA]
¢þ
>WENV182504080
OIUS01000940
[OIUS] human gut metagenome; human gut
330
406
+
Arg
CCG
[ENA]
¢þ
>WENV182504150
OIUS01006862
[OIUS] human gut metagenome; human gut
346
271
-
Gln
CTG
[ENA]
¢þ
>WENV182504167
OIUS01010997
[OIUS] human gut metagenome; human gut
356
431
+
Arg
CCT
[ENA]
¢þ
>WENV182504153
OIUS01007567
[OIUS] human gut metagenome; human gut
361
436
+
Ile
GAT
[ENA]
¢þ
>WENV182504166
OIUS01010675
[OIUS] human gut metagenome; human gut
366
440
+
Thr
TGT
[ENA]
¢þ
>WENV182504123
OIUS01003627
[OIUS] human gut metagenome; human gut
373
298
-
fMet
CAT
[ENA]
¢þ
>WENV182504095
OIUS01001601
[OIUS] human gut metagenome; human gut
382
310
-
Glu
TTC
[ENA]
¢þ
>WENV182504162
OIUS01009733
[OIUS] human gut metagenome; human gut
394
468
+
Gly
GCC
[ENA]
¢þ
>WENV182504168
OIUS01011024
[OIUS] human gut metagenome; human gut
409
336
-
Lys
CTT
[ENA]
¢þ
>WENV182504122
OIUS01003627
[OIUS] human gut metagenome; human gut
467
393
-
Thr
TGT
[ENA]
¢þ
>WENV182504163
OIUS01009733
[OIUS] human gut metagenome; human gut
474
549
+
Asn
GTT
[ENA]
¢þ
>WENV182504151
OIUS01007223
[OIUS] human gut metagenome; human gut
504
579
+
Ile2
CAT
[ENA]
¢þ
>WENV182504149
OIUS01006862
[OIUS] human gut metagenome; human gut
513
437
-
Glu
CTC
[ENA]
¢þ
>WENV182504159
OIUS01009234
[OIUS] human gut metagenome; human gut
528
602
+
Val
TAC
[ENA]
¢þ
>WENV182504084
OIUS01001226
[OIUS] human gut metagenome; human gut
548
621
+
Gly
GCC
[ENA]
¢þ
>WENV182504135
OIUS01004354
[OIUS] human gut metagenome; human gut
563
637
+
Ile
GAT
[ENA]
¢þ
>WENV182504121
OIUS01003627
[OIUS] human gut metagenome; human gut
565
483
-
Tyr
GTA
[ENA]
¢þ
>WENV182504126
OIUS01003655
[OIUS] human gut metagenome; human gut
570
497
-
Lys
CTT
[ENA]
¢þ
>WENV182504088
OIUS01001407
[OIUS] human gut metagenome; human gut
587
503
-
Leu
CAA
[ENA]
¢þ
>WENV182504148
OIUS01006862
[OIUS] human gut metagenome; human gut
593
517
-
Cys
GCA
[ENA]
¢þ
>WENV182504085
OIUS01001226
[OIUS] human gut metagenome; human gut
635
719
+
Leu
TAA
[ENA]
¢þ
>WENV182504070
OIUS01000371
[OIUS] human gut metagenome; human gut
636
712
+
Met
CAT
[ENA]
¢þ
>WENV182504120
OIUS01003627
[OIUS] human gut metagenome; human gut
644
570
-
Val
TAC
[ENA]
¢þ
>WENV182504143
OIUS01005326
[OIUS] human gut metagenome; human gut
669
744
+
Ala
CGC
[ENA]
¢þ
>WENV182504139
OIUS01004944
[OIUS] human gut metagenome; human gut
672
747
+
Ala
GGC
[ENA]
¢þ
>WENV182504097
OIUS01001698
[OIUS] human gut metagenome; human gut
688
760
+
Pro
TGG
[ENA]
¢þ
>WENV182504101
OIUS01002033
[OIUS] human gut metagenome; human gut
722
795
+
Ala
CGC
[ENA]
¢þ
>WENV182504127
OIUS01003730
[OIUS] human gut metagenome; human gut
725
654
-
Gln
TTG
[ENA]
¢þ
>WENV182504119
OIUS01003627
[OIUS] human gut metagenome; human gut
726
651
-
Gly
GCC
[ENA]
¢þ
>WENV182504133
OIUS01004331
[OIUS] human gut metagenome; human gut
739
664
-
Pro
TGG
[ENA]
¢þ
>WENV182504145
OIUS01005746
[OIUS] human gut metagenome; human gut
740
665
-
Gly
CCC
[ENA]
¢þ
>WENV182504111
OIUS01003107
[OIUS] human gut metagenome; human gut
749
835
+
Leu
CAG
[ENA]
¢þ
>WENV182504147
OIUS01006862
[OIUS] human gut metagenome; human gut
753
677
-
Glu
TTC
[ENA]
¢þ
>WENV182504061
OIUS01000157
[OIUS] human gut metagenome; human gut
766
840
+
Ile2
CAT
[ENA]
¢þ
>WENV182504136
OIUS01004531
[OIUS] human gut metagenome; human gut
778
705
-
Lys
TTT
[ENA]
¢þ
>WENV182504118
OIUS01003627
[OIUS] human gut metagenome; human gut
831
756
-
Phe
GAA
[ENA]
¢þ
>WENV182504098
OIUS01001774
[OIUS] human gut metagenome; human gut
837
911
+
Glu
CTC
[ENA]
¢þ
>WENV182504131
OIUS01004073
[OIUS] human gut metagenome; human gut
845
773
-
Glu
TTC
[ENA]
¢þ
>WENV182504140
OIUS01005159
[OIUS] human gut metagenome; human gut
851
926
+
Arg
TCT
[ENA]
¢þ
>WENV182504138
OIUS01004629
[OIUS] human gut metagenome; human gut
880
787
-
Ser
GCT
[ENA]
¢þ
>WENV182504092
OIUS01001528
[OIUS] human gut metagenome; human gut
912
837
-
Thr
GGT
[ENA]
¢þ
>WENV182504099
OIUS01001774
[OIUS] human gut metagenome; human gut
915
990
+
Lys
CTT
[ENA]
¢þ
>WENV182504141
OIUS01005159
[OIUS] human gut metagenome; human gut
934
1010
+
His
GTG
[ENA]
¢þ
>WENV182504142
OIUS01005195
[OIUS] human gut metagenome; human gut
961
1034
+
Gly
CCC
[ENA]
¢þ
>WENV182504091
OIUS01001528
[OIUS] human gut metagenome; human gut
992
916
-
Asp
GTC
[ENA]
¢þ
>WENV182504137
OIUS01004629
[OIUS] human gut metagenome; human gut
1000
913
-
Ser
TGA
[ENA]
¢þ
>WENV182504134
OIUS01004332
[OIUS] human gut metagenome; human gut
1019
947
-
Arg
CCT
[ENA]
¢þ
>WENV182504082
OIUS01001042
[OIUS] human gut metagenome; human gut
1029
1103
+
Ala
GGC
[ENA]
¢þ
>WENV182504079
OIUS01000928
[OIUS] human gut metagenome; human gut
1088
1161
+
Trp
CCA
[ENA]
¢þ
>WENV182504059
OIUS01000150
[OIUS] human gut metagenome; human gut
1125
1199
+
Thr
TGT
[ENA]
¢þ
>WENV182504129
OIUS01003929
[OIUS] human gut metagenome; human gut
1181
1254
+
Gln
CTG
[ENA]
¢þ
>WENV182504090
OIUS01001528
[OIUS] human gut metagenome; human gut
1244
1169
-
Trp
CCA
[ENA]
¢þ
>WENV182504132
OIUS01004318
[OIUS] human gut metagenome; human gut
1267
1194
-
Arg
CCT
[ENA]
¢þ
>WENV182504130
OIUS01003929
[OIUS] human gut metagenome; human gut
1284
1357
+
Pro
CGG
[ENA]
¢þ
>WENV182504105
OIUS01002337
[OIUS] human gut metagenome; human gut
1292
1216
-
Ile
GAT
[ENA]
¢þ
>WENV182504109
OIUS01002851
[OIUS] human gut metagenome; human gut
1309
1238
-
Gln
TTG
[ENA]
¢þ
>WENV182504112
OIUS01003244
[OIUS] human gut metagenome; human gut
1323
1249
-
Cys
GCA
[ENA]
¢þ
>WENV182504128
OIUS01003796
[OIUS] human gut metagenome; human gut
1331
1256
-
Pro
GGG
[ENA]
¢þ
>WENV182504065
OIUS01000193
[OIUS] human gut metagenome; human gut
1386
1298
-
Ser
GGA
[ENA]
¢þ
>WENV182504104
OIUS01002337
[OIUS] human gut metagenome; human gut
1392
1317
-
Ala
TGC
[ENA]
¢þ
>WENV182504113
OIUS01003271
[OIUS] human gut metagenome; human gut
1586
1515
-
Gln
CTG
[ENA]
¢þ
>WENV182504089
OIUS01001473
[OIUS] human gut metagenome; human gut
1592
1666
+
Asp
GTC
[ENA]
¢þ
>WENV182504077
OIUS01000806
[OIUS] human gut metagenome; human gut
1604
1532
-
Glu
CTC
[ENA]
¢þ
>WENV182504100
OIUS01001999
[OIUS] human gut metagenome; human gut
1738
1653
-
Ser
TGA
[ENA]
¢þ
>WENV182504076
OIUS01000806
[OIUS] human gut metagenome; human gut
1757
1670
-
Ser
GCT
[ENA]
¢þ
>WENV182504106
OIUS01002463
[OIUS] human gut metagenome; human gut
1787
1870
+
Leu
TAA
[ENA]
¢þ
>WENV182504107
OIUS01002573
[OIUS] human gut metagenome; human gut
1824
1899
+
Val
GAC
[ENA]
¢þ
>WENV182504094
OIUS01001601
[OIUS] human gut metagenome; human gut
1832
1746
-
Leu
TAA
[ENA]
¢þ
>WENV182504075
OIUS01000726
[OIUS] human gut metagenome; human gut
1917
1844
-
fMet
CAT
[ENA]
¢þ
>WENV182504103
OIUS01002281
[OIUS] human gut metagenome; human gut
1958
1884
-
Arg
TCT
[ENA]
¢þ
>WENV182504086
OIUS01001310
[OIUS] human gut metagenome; human gut
2047
1975
-
Cys
GCA
[ENA]
¢þ
>WENV182504072
OIUS01000522
[OIUS] human gut metagenome; human gut
2051
2124
+
Phe
GAA
[ENA]
¢þ
>WENV182504083
OIUS01001064
[OIUS] human gut metagenome; human gut
2100
2185
+
Ser
TGA
[ENA]
¢þ
>WENV182504064
OIUS01000189
[OIUS] human gut metagenome; human gut
2204
2131
-
Trp
CCA
[ENA]
¢þ
>WENV182504081
OIUS01001041
[OIUS] human gut metagenome; human gut
2380
2454
+
Pro
GGG
[ENA]
¢þ
>WENV182504087
OIUS01001324
[OIUS] human gut metagenome; human gut
2426
2350
-
Asn
GTT
[ENA]
¢þ
>WENV182504078
OIUS01000867
[OIUS] human gut metagenome; human gut
2859
2786
-
Gly
CCC
[ENA]
¢þ
>WENV182504074
OIUS01000627
[OIUS] human gut metagenome; human gut
3027
3099
+
Cys
GCA
[ENA]
¢þ
>WENV182504073
OIUS01000592
[OIUS] human gut metagenome; human gut
3057
3130
+
Lys
CTT
[ENA]
¢þ
>WENV182504071
OIUS01000508
[OIUS] human gut metagenome; human gut
3206
3294
+
Ser
GGA
[ENA]
¢þ
>WENV182504066
OIUS01000262
[OIUS] human gut metagenome; human gut
3333
3259
-
Ala
GGC
[ENA]
¢þ
>WENV182504060
OIUS01000153
[OIUS] human gut metagenome; human gut
3675
3593
-
Leu
TAG
[ENA]
¢þ
>WENV182504068
OIUS01000314
[OIUS] human gut metagenome; human gut
4227
4309
+
Leu
TAG
[ENA]
¢þ
>WENV182504067
OIUS01000299
[OIUS] human gut metagenome; human gut
4335
4406
+
Gln
CTG
[ENA]
¢þ
>WENV182504069
OIUS01000343
[OIUS] human gut metagenome; human gut
5427
5353
-
Arg
TCT
[ENA]
¢þ
>WENV182504056
OIUS01000074
[OIUS] human gut metagenome; human gut
6752
6825
+
fMet
CAT
[ENA]
¢þ
>WENV182504063
OIUS01000187
[OIUS] human gut metagenome; human gut
7194
7109
-
Ser
TGA
[ENA]
¢þ
>WENV182504062
OIUS01000168
[OIUS] human gut metagenome; human gut
7482
7555
+
Thr
CGT
[ENA]
¢þ
>WENV182504058
OIUS01000128
[OIUS] human gut metagenome; human gut
7604
7677
+
Lys
TTT
[ENA]
¢þ
>WENV182504055
OIUS01000063
[OIUS] human gut metagenome; human gut
10180
10252
+
Glu
TTC
[ENA]
¢þ
>WENV182504054
OIUS01000060
[OIUS] human gut metagenome; human gut
10370
10299
-
Gln
TTG
[ENA]
¢þ
>WENV182504051
OIUS01000013
[OIUS] human gut metagenome; human gut
16122
16049
-
Lys
TTT
[ENA]
¢þ
>WENV182504052
OIUS01000026
[OIUS] human gut metagenome; human gut
16390
16466
+
Ile
GAT
[ENA]
¢þ
>WENV182504053
OIUS01000026
[OIUS] human gut metagenome; human gut
16495
16569
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK