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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OIVS] human gut metagenome; faeces
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182508699
OIVS01000026
[OIVS] human gut metagenome; faeces
82
156
+
Asn
GTT
[ENA]
¢þ
>WENV182508704
OIVS01000880
[OIVS] human gut metagenome; faeces
174
245
+
Gln
TTG
[ENA]
¢þ
>WENV182508703
OIVS01000262
[OIVS] human gut metagenome; faeces
379
306
-
Phe
GAA
[ENA]
¢þ
>WENV182508702
OIVS01000132
[OIVS] human gut metagenome; faeces
537
622
+
Ser
GCT
[ENA]
¢þ
>WENV182508700
OIVS01000064
[OIVS] human gut metagenome; faeces
712
640
-
Arg
CCT
[ENA]
¢þ
>WENV182508701
OIVS01000094
[OIVS] human gut metagenome; faeces
999
927
-
Gln
TTG
[ENA]
¢þ
>WENV182508698
OIVS01000011
[OIVS] human gut metagenome; faeces
2211
2137
-
Ala
TGC
[ENA]
¢þ
>WENV182508697
OIVS01000011
[OIVS] human gut metagenome; faeces
2301
2227
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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