This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJHQ] seawater metagenome; Sea water
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182588252
OJHQ01000418
[OJHQ] seawater metagenome; Sea water
62
137
+
Thr
TGT
[ENA]
¢þ
>WENV182588273
OJHQ01003178
[OJHQ] seawater metagenome; Sea water
76
1
-
Ala
TGC
[ENA]
¢þ
>WENV182588256
OJHQ01000440
[OJHQ] seawater metagenome; Sea water
78
154
+
Pro
TGG
[ENA]
¢þ
>WENV182588263
OJHQ01000654
[OJHQ] seawater metagenome; Sea water
99
175
+
Trp
CCA
[ENA]
¢þ
>WENV182588264
OJHQ01000777
[OJHQ] seawater metagenome; Sea water
111
187
+
Trp
CCA
[ENA]
¢þ
>WENV182588253
OJHQ01000418
[OJHQ] seawater metagenome; Sea water
145
229
+
Tyr
GTA
[ENA]
¢þ
>WENV182588270
OJHQ01002494
[OJHQ] seawater metagenome; Sea water
159
84
-
Ile
GAT
[ENA]
¢þ
>WENV182588274
OJHQ01003292
[OJHQ] seawater metagenome; Sea water
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV182588257
OJHQ01000440
[OJHQ] seawater metagenome; Sea water
180
256
+
Arg
TCT
[ENA]
¢þ
>WENV182588267
OJHQ01001554
[OJHQ] seawater metagenome; Sea water
221
145
-
Ile2
CAT
[ENA]
¢þ
>WENV182588272
OJHQ01003178
[OJHQ] seawater metagenome; Sea water
266
190
-
Ile
GAT
[ENA]
¢þ
>WENV182588254
OJHQ01000418
[OJHQ] seawater metagenome; Sea water
268
342
+
Gly
TCC
[ENA]
¢þ
>WENV182588275
OJHQ01003292
[OJHQ] seawater metagenome; Sea water
331
414
+
Tyr
GTA
[ENA]
¢þ
>WENV182588255
OJHQ01000418
[OJHQ] seawater metagenome; Sea water
349
424
+
Thr
GGT
[ENA]
¢þ
>WENV182588258
OJHQ01000440
[OJHQ] seawater metagenome; Sea water
354
429
+
His
GTG
[ENA]
¢þ
>WENV182588245
OJHQ01000095
[OJHQ] seawater metagenome; Sea water
356
431
+
Gln
TTG
[ENA]
¢þ
>WENV182588259
OJHQ01000440
[OJHQ] seawater metagenome; Sea water
437
521
+
Leu
TAG
[ENA]
¢þ
>WENV182588271
OJHQ01003178
[OJHQ] seawater metagenome; Sea water
506
431
-
Ala
TGC
[ENA]
¢þ
>WENV182588276
OJHQ01003369
[OJHQ] seawater metagenome; Sea water
511
435
-
Met
CAT
[ENA]
¢þ
>WENV182588260
OJHQ01000440
[OJHQ] seawater metagenome; Sea water
526
601
+
Gln
TTG
[ENA]
¢þ
>WENV182588265
OJHQ01000983
[OJHQ] seawater metagenome; Sea water
622
707
+
Leu
GAG
[ENA]
¢þ
>WENV182588269
OJHQ01002494
[OJHQ] seawater metagenome; Sea water
624
549
-
Lys
TTT
[ENA]
¢þ
>WENV182588268
OJHQ01002102
[OJHQ] seawater metagenome; Sea water
628
702
+
Arg
GCG
[ENA]
¢þ
>WENV182588266
OJHQ01000983
[OJHQ] seawater metagenome; Sea water
919
995
+
fMet
CAT
[ENA]
¢þ
>WENV182588249
OJHQ01000112
[OJHQ] seawater metagenome; Sea water
1075
1000
-
Trp
CCA
[ENA]
¢þ
>WENV182588251
OJHQ01000417
[OJHQ] seawater metagenome; Sea water
1248
1173
-
Trp
CCA
[ENA]
¢þ
>WENV182588262
OJHQ01000628
[OJHQ] seawater metagenome; Sea water
1272
1357
+
Leu
GAG
[ENA]
¢þ
>WENV182588261
OJHQ01000572
[OJHQ] seawater metagenome; Sea water
1350
1425
+
Asn
GTT
[ENA]
¢þ
>WENV182588250
OJHQ01000245
[OJHQ] seawater metagenome; Sea water
1849
1775
-
Gln
TTG
[ENA]
¢þ
>WENV182588248
OJHQ01000112
[OJHQ] seawater metagenome; Sea water
2480
2405
-
Thr
GGT
[ENA]
¢þ
>WENV182588247
OJHQ01000112
[OJHQ] seawater metagenome; Sea water
2577
2504
-
Gly
TCC
[ENA]
¢þ
>WENV182588246
OJHQ01000112
[OJHQ] seawater metagenome; Sea water
2686
2602
-
Tyr
GTA
[ENA]
¢þ
>WENV182588244
OJHQ01000003
[OJHQ] seawater metagenome; Sea water
7633
7558
-
Trp
CCA
[ENA]
¢þ
>WENV182588243
OJHQ01000003
[OJHQ] seawater metagenome; Sea water
9122
9047
-
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK