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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[OJUD] human gut metagenome; human gut
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182800484
OJUD01000193
[OJUD] human gut metagenome; human gut
79
4
-
Val
TAC
[ENA]
¢þ
>WENV182800489
OJUD01000576
[OJUD] human gut metagenome; human gut
87
3
-
Tyr
GTA
[ENA]
¢þ
>WENV182800500
OJUD01001693
[OJUD] human gut metagenome; human gut
102
178
+
Ile
GAT
[ENA]
¢þ
>WENV182800488
OJUD01000483
[OJUD] human gut metagenome; human gut
105
181
+
Asp
GTC
[ENA]
¢þ
>WENV182800490
OJUD01000667
[OJUD] human gut metagenome; human gut
140
65
-
Thr
TGT
[ENA]
¢þ
>WENV182800465
OJUD01000034
[OJUD] human gut metagenome; human gut
145
221
+
Arg
ACG
[ENA]
¢þ
>WENV182800481
OJUD01000179
[OJUD] human gut metagenome; human gut
150
75
-
His
GTG
[ENA]
¢þ
>WENV182800498
OJUD01001640
[OJUD] human gut metagenome; human gut
173
247
+
Gly
TCC
[ENA]
¢þ
>WENV182800499
OJUD01001640
[OJUD] human gut metagenome; human gut
253
328
+
Thr
GGT
[ENA]
¢þ
>WENV182800480
OJUD01000179
[OJUD] human gut metagenome; human gut
282
206
-
Arg
CCG
[ENA]
¢þ
>WENV182800483
OJUD01000193
[OJUD] human gut metagenome; human gut
282
207
-
Lys
TTT
[ENA]
¢þ
>WENV182800501
OJUD01001693
[OJUD] human gut metagenome; human gut
285
360
+
Ala
TGC
[ENA]
¢þ
>WENV182800472
OJUD01000067
[OJUD] human gut metagenome; human gut
389
465
+
fMet
CAT
[ENA]
¢þ
>WENV182800470
OJUD01000057
[OJUD] human gut metagenome; human gut
506
430
-
fMet
CAT
[ENA]
¢þ
>WENV182800473
OJUD01000070
[OJUD] human gut metagenome; human gut
506
581
+
Ala
GGC
[ENA]
¢þ
>WENV182800493
OJUD01000824
[OJUD] human gut metagenome; human gut
587
663
+
Val
GAC
[ENA]
¢þ
>WENV182800494
OJUD01000824
[OJUD] human gut metagenome; human gut
668
744
+
Val
GAC
[ENA]
¢þ
>WENV182800496
OJUD01001156
[OJUD] human gut metagenome; human gut
810
896
+
Leu
CAG
[ENA]
¢þ
>WENV182800463
OJUD01000024
[OJUD] human gut metagenome; human gut
867
794
-
Gly
CCC
[ENA]
¢þ
>WENV182800497
OJUD01001156
[OJUD] human gut metagenome; human gut
928
1014
+
Leu
CAG
[ENA]
¢þ
>WENV182800495
OJUD01001029
[OJUD] human gut metagenome; human gut
1618
1543
-
Lys
TTT
[ENA]
¢þ
>WENV182800486
OJUD01000279
[OJUD] human gut metagenome; human gut
1627
1552
-
Thr
CGT
[ENA]
¢þ
>WENV182800492
OJUD01000804
[OJUD] human gut metagenome; human gut
2156
2248
+
Ser
GCT
[ENA]
¢þ
>WENV182800491
OJUD01000791
[OJUD] human gut metagenome; human gut
2165
2259
+
SeC
TCA
[ENA]
¢þ
>WENV182800469
OJUD01000057
[OJUD] human gut metagenome; human gut
2396
2310
-
Leu
GAG
[ENA]
¢þ
>WENV182800479
OJUD01000170
[OJUD] human gut metagenome; human gut
3748
3835
+
Ser
GGA
[ENA]
¢þ
>WENV182800487
OJUD01000469
[OJUD] human gut metagenome; human gut
3903
3828
-
Ile2
CAT
[ENA]
¢þ
>WENV182800485
OJUD01000200
[OJUD] human gut metagenome; human gut
4944
5020
+
Arg
TCT
[ENA]
¢þ
>WENV182800474
OJUD01000094
[OJUD] human gut metagenome; human gut
5602
5677
+
Gly
GCC
[ENA]
¢þ
>WENV182800475
OJUD01000094
[OJUD] human gut metagenome; human gut
5716
5789
+
Cys
GCA
[ENA]
¢þ
>WENV182800476
OJUD01000094
[OJUD] human gut metagenome; human gut
5803
5889
+
Leu
TAA
[ENA]
¢þ
>WENV182800478
OJUD01000143
[OJUD] human gut metagenome; human gut
6261
6336
+
Phe
GAA
[ENA]
¢þ
>WENV182800482
OJUD01000185
[OJUD] human gut metagenome; human gut
6752
6824
+
Arg
CCT
[ENA]
¢þ
>WENV182800471
OJUD01000064
[OJUD] human gut metagenome; human gut
7686
7761
+
Asn
GTT
[ENA]
¢þ
>WENV182800477
OJUD01000120
[OJUD] human gut metagenome; human gut
8725
8649
-
Pro
TGG
[ENA]
¢þ
>WENV182800464
OJUD01000029
[OJUD] human gut metagenome; human gut
10750
10674
-
Pro
GGG
[ENA]
¢þ
>WENV182800466
OJUD01000054
[OJUD] human gut metagenome; human gut
11603
11679
+
Met
CAT
[ENA]
¢þ
>WENV182800467
OJUD01000054
[OJUD] human gut metagenome; human gut
11725
11799
+
Gln
CTG
[ENA]
¢þ
>WENV182800468
OJUD01000054
[OJUD] human gut metagenome; human gut
11897
11971
+
Gln
CTG
[ENA]
¢þ
>WENV182800462
OJUD01000009
[OJUD] human gut metagenome; human gut
19603
19679
+
Pro
CGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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