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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
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|
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HOW TO USE
tRNA gene List
[OJUK] human gut metagenome; human gut
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182803281
OJUK01000371
[OJUK] human gut metagenome; human gut
10
86
+
Arg
ACG
[ENA]
¢þ
>WENV182803309
OJUK01007858
[OJUK] human gut metagenome; human gut
64
139
+
Lys
TTT
[ENA]
¢þ
>WENV182803304
OJUK01004258
[OJUK] human gut metagenome; human gut
87
163
+
Pro
TGG
[ENA]
¢þ
>WENV182803295
OJUK01002148
[OJUK] human gut metagenome; human gut
90
165
+
Lys
TTT
[ENA]
¢þ
>WENV182803305
OJUK01005185
[OJUK] human gut metagenome; human gut
141
66
-
Thr
TGT
[ENA]
¢þ
>WENV182803278
OJUK01000140
[OJUK] human gut metagenome; human gut
149
74
-
His
GTG
[ENA]
¢þ
>WENV182803310
OJUK01007858
[OJUK] human gut metagenome; human gut
150
233
+
Leu
TAG
[ENA]
¢þ
>WENV182803316
OJUK01007905
[OJUK] human gut metagenome; human gut
163
79
-
Leu
TAG
[ENA]
¢þ
>WENV182803303
OJUK01004155
[OJUK] human gut metagenome; human gut
185
261
+
Val
GAC
[ENA]
¢þ
>WENV182803297
OJUK01002162
[OJUK] human gut metagenome; human gut
210
135
-
Ile2
CAT
[ENA]
¢þ
>WENV182803307
OJUK01006292
[OJUK] human gut metagenome; human gut
239
163
-
Arg
TCT
[ENA]
¢þ
>WENV182803315
OJUK01007905
[OJUK] human gut metagenome; human gut
248
172
-
Met
CAT
[ENA]
¢þ
>WENV182803311
OJUK01007858
[OJUK] human gut metagenome; human gut
257
331
+
Gly
GCC
[ENA]
¢þ
>WENV182803318
OJUK01007987
[OJUK] human gut metagenome; human gut
261
186
-
Thr
GGT
[ENA]
¢þ
>WENV182803277
OJUK01000140
[OJUK] human gut metagenome; human gut
284
208
-
Arg
CCG
[ENA]
¢þ
>WENV182803312
OJUK01007858
[OJUK] human gut metagenome; human gut
335
408
+
Gly
TCC
[ENA]
¢þ
>WENV182803314
OJUK01007905
[OJUK] human gut metagenome; human gut
338
264
-
Gln
TTG
[ENA]
¢þ
>WENV182803317
OJUK01007987
[OJUK] human gut metagenome; human gut
341
267
-
Gly
TCC
[ENA]
¢þ
>WENV182803313
OJUK01007905
[OJUK] human gut metagenome; human gut
446
362
-
Leu
TAG
[ENA]
¢þ
>WENV182803287
OJUK01000830
[OJUK] human gut metagenome; human gut
485
560
+
Ala
GGC
[ENA]
¢þ
>WENV182803308
OJUK01006648
[OJUK] human gut metagenome; human gut
501
425
-
Arg
TCT
[ENA]
¢þ
>WENV182803306
OJUK01006127
[OJUK] human gut metagenome; human gut
514
601
+
Ser
GGA
[ENA]
¢þ
>WENV182803285
OJUK01000644
[OJUK] human gut metagenome; human gut
521
435
-
Leu
GAG
[ENA]
¢þ
>WENV182803302
OJUK01003054
[OJUK] human gut metagenome; human gut
523
437
-
Leu
CAG
[ENA]
¢þ
>WENV182803289
OJUK01001009
[OJUK] human gut metagenome; human gut
615
690
+
Phe
GAA
[ENA]
¢þ
>WENV182803294
OJUK01001907
[OJUK] human gut metagenome; human gut
648
572
-
Pro
GGG
[ENA]
¢þ
>WENV182803299
OJUK01002236
[OJUK] human gut metagenome; human gut
754
681
-
Cys
GCA
[ENA]
¢þ
>WENV182803276
OJUK01000060
[OJUK] human gut metagenome; human gut
801
707
-
SeC
TCA
[ENA]
¢þ
>WENV182803296
OJUK01002149
[OJUK] human gut metagenome; human gut
856
945
+
Ser
CGA
[ENA]
¢þ
>WENV182803298
OJUK01002236
[OJUK] human gut metagenome; human gut
883
808
-
Gly
GCC
[ENA]
¢þ
>WENV182803301
OJUK01002804
[OJUK] human gut metagenome; human gut
908
833
-
Trp
CCA
[ENA]
¢þ
>WENV182803300
OJUK01002804
[OJUK] human gut metagenome; human gut
1038
962
-
Asp
GTC
[ENA]
¢þ
>WENV182803291
OJUK01001167
[OJUK] human gut metagenome; human gut
1175
1100
-
Asn
GTT
[ENA]
¢þ
>WENV182803292
OJUK01001649
[OJUK] human gut metagenome; human gut
1219
1294
+
Thr
CGT
[ENA]
¢þ
>WENV182803293
OJUK01001667
[OJUK] human gut metagenome; human gut
1382
1474
+
Ser
GCT
[ENA]
¢þ
>WENV182803279
OJUK01000142
[OJUK] human gut metagenome; human gut
1395
1311
-
Tyr
GTA
[ENA]
¢þ
>WENV182803290
OJUK01001113
[OJUK] human gut metagenome; human gut
1500
1584
+
Leu
CAA
[ENA]
¢þ
>WENV182803288
OJUK01000969
[OJUK] human gut metagenome; human gut
1628
1553
-
Gly
GCC
[ENA]
¢þ
>WENV182803284
OJUK01000439
[OJUK] human gut metagenome; human gut
1878
1951
+
Gly
CCC
[ENA]
¢þ
>WENV182803286
OJUK01000802
[OJUK] human gut metagenome; human gut
2080
2155
+
Phe
GAA
[ENA]
¢þ
>WENV182803280
OJUK01000268
[OJUK] human gut metagenome; human gut
2324
2400
+
Pro
CGG
[ENA]
¢þ
>WENV182803283
OJUK01000416
[OJUK] human gut metagenome; human gut
2659
2585
-
Gln
CTG
[ENA]
¢þ
>WENV182803282
OJUK01000416
[OJUK] human gut metagenome; human gut
2809
2735
-
Gln
CTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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