This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJVL] human gut metagenome; human gut
HIT:
159 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182806142
OJVL01002818
[OJVL] human gut metagenome; human gut
1
74
+
Glu
TTC
[ENA]
¢þ
>WENV182806086
OJVL01000073
[OJVL] human gut metagenome; human gut
2
78
+
Arg
ACG
[ENA]
¢þ
>WENV182806139
OJVL01001866
[OJVL] human gut metagenome; human gut
5
81
+
Arg
CCG
[ENA]
¢þ
>WENV182806125
OJVL01001140
[OJVL] human gut metagenome; human gut
22
94
+
Thr
CGT
[ENA]
¢þ
>WENV182806149
OJVL01003557
[OJVL] human gut metagenome; human gut
29
104
+
Gly
GCC
[ENA]
¢þ
>WENV182806127
OJVL01001435
[OJVL] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¢þ
>WENV182806108
OJVL01000510
[OJVL] human gut metagenome; human gut
81
156
+
Trp
CCA
[ENA]
¢þ
>WENV182806143
OJVL01002818
[OJVL] human gut metagenome; human gut
86
175
+
Ser
TGA
[ENA]
¢þ
>WENV182806136
OJVL01001578
[OJVL] human gut metagenome; human gut
103
179
+
Ile
GAT
[ENA]
¢þ
>WENV182806109
OJVL01000541
[OJVL] human gut metagenome; human gut
107
182
+
Ala
TGC
[ENA]
¢þ
>WENV182806112
OJVL01000583
[OJVL] human gut metagenome; human gut
128
53
-
His
GTG
[ENA]
¢þ
>WENV182806087
OJVL01000073
[OJVL] human gut metagenome; human gut
139
215
+
Arg
ACG
[ENA]
¢þ
>WENV182806065
OJVL01000035
[OJVL] human gut metagenome; human gut
148
222
+
Gln
CTG
[ENA]
¢þ
>WENV182806128
OJVL01001435
[OJVL] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¢þ
>WENV182806144
OJVL01002818
[OJVL] human gut metagenome; human gut
208
283
+
fMet
CAT
[ENA]
¢þ
>WENV182806111
OJVL01000583
[OJVL] human gut metagenome; human gut
238
162
-
Arg
TCT
[ENA]
¢þ
>WENV182806129
OJVL01001435
[OJVL] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¢þ
>WENV182806137
OJVL01001578
[OJVL] human gut metagenome; human gut
289
364
+
Ala
TGC
[ENA]
¢þ
>WENV182806106
OJVL01000422
[OJVL] human gut metagenome; human gut
304
380
+
Ile
GAT
[ENA]
¢þ
>WENV182806145
OJVL01002818
[OJVL] human gut metagenome; human gut
331
407
+
Asp
GTC
[ENA]
¢þ
>WENV182806130
OJVL01001435
[OJVL] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¢þ
>WENV182806148
OJVL01003528
[OJVL] human gut metagenome; human gut
351
426
+
Thr
TGT
[ENA]
¢þ
>WENV182806110
OJVL01000583
[OJVL] human gut metagenome; human gut
371
295
-
Pro
TGG
[ENA]
¢þ
>WENV182806088
OJVL01000073
[OJVL] human gut metagenome; human gut
408
484
+
Arg
ACG
[ENA]
¢þ
>WENV182806146
OJVL01002818
[OJVL] human gut metagenome; human gut
409
479
+
Gly
TCC
[ENA]
¢þ
>WENV182806124
OJVL01001120
[OJVL] human gut metagenome; human gut
412
323
-
Ser
CGA
[ENA]
¢þ
>WENV182806107
OJVL01000422
[OJVL] human gut metagenome; human gut
436
511
+
Ala
TGC
[ENA]
¢þ
>WENV182806131
OJVL01001435
[OJVL] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¢þ
>WENV182806147
OJVL01002818
[OJVL] human gut metagenome; human gut
488
563
+
Ile
GAT
[ENA]
¢þ
>WENV182806132
OJVL01001435
[OJVL] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¢þ
>WENV182806117
OJVL01001081
[OJVL] human gut metagenome; human gut
580
655
+
Val
TAC
[ENA]
¢þ
>WENV182806116
OJVL01001020
[OJVL] human gut metagenome; human gut
589
514
-
Glu
TTC
[ENA]
¢þ
>WENV182806141
OJVL01002112
[OJVL] human gut metagenome; human gut
630
545
-
Leu
TAA
[ENA]
¢þ
>WENV182806133
OJVL01001435
[OJVL] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¢þ
>WENV182806118
OJVL01001081
[OJVL] human gut metagenome; human gut
672
747
+
Thr
TGT
[ENA]
¢þ
>WENV182806089
OJVL01000073
[OJVL] human gut metagenome; human gut
677
753
+
Arg
ACG
[ENA]
¢þ
>WENV182806115
OJVL01001020
[OJVL] human gut metagenome; human gut
690
615
-
Ala
GGC
[ENA]
¢þ
>WENV182806140
OJVL01002112
[OJVL] human gut metagenome; human gut
715
642
-
Cys
GCA
[ENA]
¢þ
>WENV182806134
OJVL01001435
[OJVL] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¢þ
>WENV182806119
OJVL01001081
[OJVL] human gut metagenome; human gut
752
834
+
Tyr
GTA
[ENA]
¢þ
>WENV182806138
OJVL01001766
[OJVL] human gut metagenome; human gut
799
870
+
Trp
CCA
[ENA]
¢þ
>WENV182806120
OJVL01001081
[OJVL] human gut metagenome; human gut
849
922
+
Trp
CCA
[ENA]
¢þ
>WENV182806135
OJVL01001449
[OJVL] human gut metagenome; human gut
873
948
+
Arg
TCT
[ENA]
¢þ
>WENV182806114
OJVL01000841
[OJVL] human gut metagenome; human gut
919
990
+
Trp
CCA
[ENA]
¢þ
>WENV182806121
OJVL01001081
[OJVL] human gut metagenome; human gut
925
998
+
His
GTG
[ENA]
¢þ
>WENV182806122
OJVL01001081
[OJVL] human gut metagenome; human gut
1009
1080
+
Gln
TTG
[ENA]
¢þ
>WENV182806123
OJVL01001081
[OJVL] human gut metagenome; human gut
1086
1159
+
Cys
GCA
[ENA]
¢þ
>WENV182806126
OJVL01001148
[OJVL] human gut metagenome; human gut
1222
1147
-
Glu
TTC
[ENA]
¢þ
>WENV182806113
OJVL01000592
[OJVL] human gut metagenome; human gut
1683
1756
+
Lys
CTT
[ENA]
¢þ
>WENV182806104
OJVL01000321
[OJVL] human gut metagenome; human gut
2419
2505
+
Leu
GAG
[ENA]
¢þ
>WENV182806083
OJVL01000071
[OJVL] human gut metagenome; human gut
2764
2839
+
Ala
GGC
[ENA]
¢þ
>WENV182806084
OJVL01000071
[OJVL] human gut metagenome; human gut
2881
2956
+
Ala
GGC
[ENA]
¢þ
>WENV182806105
OJVL01000358
[OJVL] human gut metagenome; human gut
2977
3049
+
Thr
GGT
[ENA]
¢þ
>WENV182806099
OJVL01000171
[OJVL] human gut metagenome; human gut
3194
3119
-
Arg
CCT
[ENA]
¢þ
>WENV182806059
OJVL01000024
[OJVL] human gut metagenome; human gut
3407
3332
-
Asn
GTT
[ENA]
¢þ
>WENV182806101
OJVL01000283
[OJVL] human gut metagenome; human gut
3620
3695
+
Thr
TGT
[ENA]
¢þ
>WENV182806102
OJVL01000283
[OJVL] human gut metagenome; human gut
3706
3790
+
Tyr
GTA
[ENA]
¢þ
>WENV182806103
OJVL01000283
[OJVL] human gut metagenome; human gut
3910
3984
+
Gly
TCC
[ENA]
¢þ
>WENV182806055
OJVL01000024
[OJVL] human gut metagenome; human gut
4399
4488
+
Ser
CGA
[ENA]
¢þ
>WENV182806100
OJVL01000216
[OJVL] human gut metagenome; human gut
4739
4812
+
Arg
CCG
[ENA]
¢þ
>WENV182806081
OJVL01000062
[OJVL] human gut metagenome; human gut
5354
5279
-
Asn
GTT
[ENA]
¢þ
>WENV182806090
OJVL01000106
[OJVL] human gut metagenome; human gut
5844
5919
+
Thr
CGT
[ENA]
¢þ
>WENV182806098
OJVL01000142
[OJVL] human gut metagenome; human gut
6669
6596
-
Pro
TGG
[ENA]
¢þ
>WENV182806097
OJVL01000142
[OJVL] human gut metagenome; human gut
6754
6681
-
Arg
ACG
[ENA]
¢þ
>WENV182806096
OJVL01000142
[OJVL] human gut metagenome; human gut
6854
6769
-
Leu
TAA
[ENA]
¢þ
>WENV182806095
OJVL01000142
[OJVL] human gut metagenome; human gut
6941
6870
-
Gly
GCC
[ENA]
¢þ
>WENV182806094
OJVL01000142
[OJVL] human gut metagenome; human gut
7021
6946
-
Thr
TGT
[ENA]
¢þ
>WENV182806093
OJVL01000142
[OJVL] human gut metagenome; human gut
7110
7027
-
Leu
TAG
[ENA]
¢þ
>WENV182806092
OJVL01000142
[OJVL] human gut metagenome; human gut
7199
7125
-
Lys
TTT
[ENA]
¢þ
>WENV182806091
OJVL01000142
[OJVL] human gut metagenome; human gut
7278
7204
-
Val
TAC
[ENA]
¢þ
>WENV182806069
OJVL01000037
[OJVL] human gut metagenome; human gut
7501
7416
-
Ser
CGA
[ENA]
¢þ
>WENV182806078
OJVL01000055
[OJVL] human gut metagenome; human gut
12906
12830
-
Val
GAC
[ENA]
¢þ
>WENV182806077
OJVL01000055
[OJVL] human gut metagenome; human gut
12987
12911
-
Val
GAC
[ENA]
¢þ
>WENV182806000
OJVL01000002
[OJVL] human gut metagenome; human gut
16883
16957
+
Pro
GGG
[ENA]
¢þ
>WENV182806043
OJVL01000017
[OJVL] human gut metagenome; human gut
17305
17392
+
Ser
GGA
[ENA]
¢þ
>WENV182806070
OJVL01000039
[OJVL] human gut metagenome; human gut
18584
18670
+
Ser
TGA
[ENA]
¢þ
>WENV182806011
OJVL01000004
[OJVL] human gut metagenome; human gut
19589
19516
-
Glu
TTC
[ENA]
¢þ
>WENV182806076
OJVL01000052
[OJVL] human gut metagenome; human gut
19750
19826
+
Pro
CGG
[ENA]
¢þ
>WENV182806044
OJVL01000017
[OJVL] human gut metagenome; human gut
20278
20365
+
Ser
GGA
[ENA]
¢þ
>WENV182806007
OJVL01000004
[OJVL] human gut metagenome; human gut
20840
20914
+
Asp
GTC
[ENA]
¢þ
>WENV182806085
OJVL01000071
[OJVL] human gut metagenome; human gut
22453
22380
-
Arg
CCT
[ENA]
¢þ
>WENV182806080
OJVL01000062
[OJVL] human gut metagenome; human gut
29274
29199
-
Asn
GTT
[ENA]
¢þ
>WENV182806079
OJVL01000062
[OJVL] human gut metagenome; human gut
31050
31125
+
Asn
GTT
[ENA]
¢þ
>WENV182806074
OJVL01000045
[OJVL] human gut metagenome; human gut
31945
31870
-
Phe
GAA
[ENA]
¢þ
>WENV182806050
OJVL01000020
[OJVL] human gut metagenome; human gut
31960
31886
-
Val
CAC
[ENA]
¢þ
>WENV182806049
OJVL01000020
[OJVL] human gut metagenome; human gut
32080
32008
-
Val
GAC
[ENA]
¢þ
>WENV182806048
OJVL01000020
[OJVL] human gut metagenome; human gut
32199
32126
-
Gly
GCC
[ENA]
¢þ
>WENV182806052
OJVL01000022
[OJVL] human gut metagenome; human gut
36300
36215
-
Leu
CAG
[ENA]
¢þ
>WENV182806071
OJVL01000039
[OJVL] human gut metagenome; human gut
38689
38614
-
Pro
CGG
[ENA]
¢þ
>WENV182806082
OJVL01000065
[OJVL] human gut metagenome; human gut
41009
41085
+
Pro
GGG
[ENA]
¢þ
>WENV182806056
OJVL01000024
[OJVL] human gut metagenome; human gut
42535
42610
+
Gly
GCC
[ENA]
¢þ
>WENV182806057
OJVL01000024
[OJVL] human gut metagenome; human gut
42649
42722
+
Cys
GCA
[ENA]
¢þ
>WENV182806058
OJVL01000024
[OJVL] human gut metagenome; human gut
42736
42822
+
Leu
TAA
[ENA]
¢þ
>WENV182806012
OJVL01000005
[OJVL] human gut metagenome; human gut
45912
45985
+
Glu
CTC
[ENA]
¢þ
>WENV182806008
OJVL01000004
[OJVL] human gut metagenome; human gut
45913
45989
+
Asp
GTC
[ENA]
¢þ
>WENV182806013
OJVL01000005
[OJVL] human gut metagenome; human gut
46024
46098
+
Gln
CTG
[ENA]
¢þ
>WENV182806051
OJVL01000022
[OJVL] human gut metagenome; human gut
46438
46511
+
Gly
CCC
[ENA]
¢þ
>WENV182806021
OJVL01000005
[OJVL] human gut metagenome; human gut
47490
47402
-
Ser
GGA
[ENA]
¢þ
>WENV182805999
OJVL01000001
[OJVL] human gut metagenome; human gut
48452
48378
-
Arg
ACG
[ENA]
¢þ
>WENV182806073
OJVL01000043
[OJVL] human gut metagenome; human gut
48498
48404
-
SeC
TCA
[ENA]
¢þ
>WENV182806046
OJVL01000018
[OJVL] human gut metagenome; human gut
49912
49985
+
Gly
CCC
[ENA]
¢þ
>WENV182806037
OJVL01000010
[OJVL] human gut metagenome; human gut
51577
51663
+
Leu
CAG
[ENA]
¢þ
>WENV182806038
OJVL01000010
[OJVL] human gut metagenome; human gut
51692
51778
+
Leu
CAG
[ENA]
¢þ
>WENV182806009
OJVL01000004
[OJVL] human gut metagenome; human gut
51695
51769
+
Ile2
CAT
[ENA]
¢þ
>WENV182806039
OJVL01000010
[OJVL] human gut metagenome; human gut
51810
51896
+
Leu
CAG
[ENA]
¢þ
>WENV182806053
OJVL01000023
[OJVL] human gut metagenome; human gut
52217
52303
+
Leu
GAG
[ENA]
¢þ
>WENV182806064
OJVL01000027
[OJVL] human gut metagenome; human gut
54048
53972
-
Pro
TGG
[ENA]
¢þ
>WENV182806054
OJVL01000023
[OJVL] human gut metagenome; human gut
54109
54185
+
fMet
CAT
[ENA]
¢þ
>WENV182806063
OJVL01000027
[OJVL] human gut metagenome; human gut
54180
54094
-
Leu
CAG
[ENA]
¢þ
>WENV182806062
OJVL01000027
[OJVL] human gut metagenome; human gut
54278
54203
-
His
GTG
[ENA]
¢þ
>WENV182806061
OJVL01000027
[OJVL] human gut metagenome; human gut
54410
54334
-
Arg
CCG
[ENA]
¢þ
>WENV182806072
OJVL01000042
[OJVL] human gut metagenome; human gut
54885
54809
-
Asp
GTC
[ENA]
¢þ
>WENV182806047
OJVL01000020
[OJVL] human gut metagenome; human gut
56687
56612
-
Trp
CCA
[ENA]
¢þ
>WENV182806068
OJVL01000037
[OJVL] human gut metagenome; human gut
57443
57356
-
Ser
GCT
[ENA]
¢þ
>WENV182806042
OJVL01000015
[OJVL] human gut metagenome; human gut
58464
58380
-
Leu
CAA
[ENA]
¢þ
>WENV182806075
OJVL01000046
[OJVL] human gut metagenome; human gut
58479
58404
-
Ile2
CAT
[ENA]
¢þ
>WENV182806067
OJVL01000037
[OJVL] human gut metagenome; human gut
66626
66552
-
Met
CAT
[ENA]
¢þ
>WENV182806066
OJVL01000037
[OJVL] human gut metagenome; human gut
66785
66703
-
Tyr
GTA
[ENA]
¢þ
>WENV182805998
OJVL01000001
[OJVL] human gut metagenome; human gut
68245
68172
-
Ala
GGC
[ENA]
¢þ
>WENV182806014
OJVL01000005
[OJVL] human gut metagenome; human gut
71623
71696
+
Lys
TTT
[ENA]
¢þ
>WENV182805991
OJVL01000001
[OJVL] human gut metagenome; human gut
78855
78927
+
Gln
TTG
[ENA]
¢þ
>WENV182806034
OJVL01000009
[OJVL] human gut metagenome; human gut
80407
80481
+
Thr
TGT
[ENA]
¢þ
>WENV182805992
OJVL01000001
[OJVL] human gut metagenome; human gut
86119
86193
+
Pro
TGG
[ENA]
¢þ
>WENV182806010
OJVL01000004
[OJVL] human gut metagenome; human gut
87090
87163
+
Arg
CCT
[ENA]
¢þ
>WENV182806015
OJVL01000005
[OJVL] human gut metagenome; human gut
95316
95390
+
Lys
CTT
[ENA]
¢þ
>WENV182805997
OJVL01000001
[OJVL] human gut metagenome; human gut
96256
96182
-
Leu
CAA
[ENA]
¢þ
>WENV182806002
OJVL01000002
[OJVL] human gut metagenome; human gut
98558
98485
-
Asn
GTT
[ENA]
¢þ
>WENV182806060
OJVL01000027
[OJVL] human gut metagenome; human gut
99783
99708
-
Trp
CCA
[ENA]
¢þ
>WENV182806041
OJVL01000013
[OJVL] human gut metagenome; human gut
100132
100057
-
Phe
GAA
[ENA]
¢þ
>WENV182806040
OJVL01000011
[OJVL] human gut metagenome; human gut
105638
105714
+
Arg
TCT
[ENA]
¢þ
>WENV182806001
OJVL01000002
[OJVL] human gut metagenome; human gut
108052
107979
-
Asn
GTT
[ENA]
¢þ
>WENV182806045
OJVL01000017
[OJVL] human gut metagenome; human gut
116344
116257
-
Ser
TGA
[ENA]
¢þ
>WENV182806006
OJVL01000003
[OJVL] human gut metagenome; human gut
117559
117483
-
fMet
CAT
[ENA]
¢þ
>WENV182806005
OJVL01000003
[OJVL] human gut metagenome; human gut
117670
117594
-
fMet
CAT
[ENA]
¢þ
>WENV182806004
OJVL01000003
[OJVL] human gut metagenome; human gut
117781
117705
-
fMet
CAT
[ENA]
¢þ
>WENV182806036
OJVL01000009
[OJVL] human gut metagenome; human gut
121503
121430
-
Ala
TGC
[ENA]
¢þ
>WENV182806035
OJVL01000009
[OJVL] human gut metagenome; human gut
121620
121546
-
Ile
GAT
[ENA]
¢þ
>WENV182806033
OJVL01000008
[OJVL] human gut metagenome; human gut
132899
132815
-
Tyr
GTA
[ENA]
¢þ
>WENV182806032
OJVL01000008
[OJVL] human gut metagenome; human gut
133019
132935
-
Tyr
GTA
[ENA]
¢þ
>WENV182806020
OJVL01000005
[OJVL] human gut metagenome; human gut
148801
148725
-
fMet
CAT
[ENA]
¢þ
>WENV182805996
OJVL01000001
[OJVL] human gut metagenome; human gut
150419
150338
-
Leu
TAA
[ENA]
¢þ
>WENV182806031
OJVL01000007
[OJVL] human gut metagenome; human gut
156013
156101
+
Leu
GAG
[ENA]
¢þ
>WENV182806030
OJVL01000006
[OJVL] human gut metagenome; human gut
156763
156688
-
Lys
TTT
[ENA]
¢þ
>WENV182806029
OJVL01000006
[OJVL] human gut metagenome; human gut
156973
156898
-
Lys
TTT
[ENA]
¢þ
>WENV182806028
OJVL01000006
[OJVL] human gut metagenome; human gut
157193
157118
-
Lys
TTT
[ENA]
¢þ
>WENV182806027
OJVL01000006
[OJVL] human gut metagenome; human gut
157272
157197
-
Val
TAC
[ENA]
¢þ
>WENV182806026
OJVL01000006
[OJVL] human gut metagenome; human gut
157475
157400
-
Lys
TTT
[ENA]
¢þ
>WENV182806016
OJVL01000005
[OJVL] human gut metagenome; human gut
163737
163812
+
Arg
CCG
[ENA]
¢þ
>WENV182806017
OJVL01000005
[OJVL] human gut metagenome; human gut
193335
193408
+
Gly
TCC
[ENA]
¢þ
>WENV182805995
OJVL01000001
[OJVL] human gut metagenome; human gut
239725
239651
-
Val
TAC
[ENA]
¢þ
>WENV182806019
OJVL01000005
[OJVL] human gut metagenome; human gut
242761
242680
-
Leu
TAG
[ENA]
¢þ
>WENV182806018
OJVL01000005
[OJVL] human gut metagenome; human gut
242928
242855
-
Thr
CGT
[ENA]
¢þ
>WENV182806022
OJVL01000006
[OJVL] human gut metagenome; human gut
250864
250940
+
Met
CAT
[ENA]
¢þ
>WENV182806023
OJVL01000006
[OJVL] human gut metagenome; human gut
250949
251033
+
Leu
TAG
[ENA]
¢þ
>WENV182806024
OJVL01000006
[OJVL] human gut metagenome; human gut
251071
251145
+
Gln
TTG
[ENA]
¢þ
>WENV182806025
OJVL01000006
[OJVL] human gut metagenome; human gut
251180
251254
+
Gln
TTG
[ENA]
¢þ
>WENV182806003
OJVL01000003
[OJVL] human gut metagenome; human gut
291272
291364
+
Ser
GCT
[ENA]
¢þ
>WENV182805993
OJVL01000001
[OJVL] human gut metagenome; human gut
308203
308278
+
His
GTG
[ENA]
¢þ
>WENV182805994
OJVL01000001
[OJVL] human gut metagenome; human gut
364964
364890
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK