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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[OJWD] human gut metagenome; human gut
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182808231
OJWD01000738
[OJWD] human gut metagenome; human gut
35
111
+
Val
GAC
[ENA]
¢þ
>WENV182808252
OJWD01003841
[OJWD] human gut metagenome; human gut
107
180
+
Cys
GCA
[ENA]
¢þ
>WENV182808255
OJWD01004884
[OJWD] human gut metagenome; human gut
123
199
+
Ile
GAT
[ENA]
¢þ
>WENV182808254
OJWD01003918
[OJWD] human gut metagenome; human gut
136
61
-
Phe
GAA
[ENA]
¢þ
>WENV182808220
OJWD01000106
[OJWD] human gut metagenome; human gut
151
76
-
His
GTG
[ENA]
¢þ
>WENV182808253
OJWD01003841
[OJWD] human gut metagenome; human gut
192
278
+
Leu
TAA
[ENA]
¢þ
>WENV182808247
OJWD01002011
[OJWD] human gut metagenome; human gut
206
281
+
Gly
GCC
[ENA]
¢þ
>WENV182808216
OJWD01000047
[OJWD] human gut metagenome; human gut
238
144
-
SeC
TCA
[ENA]
¢þ
>WENV182808250
OJWD01002615
[OJWD] human gut metagenome; human gut
279
354
+
Thr
CGT
[ENA]
¢þ
>WENV182808219
OJWD01000106
[OJWD] human gut metagenome; human gut
283
207
-
Arg
CCG
[ENA]
¢þ
>WENV182808256
OJWD01004884
[OJWD] human gut metagenome; human gut
306
381
+
Ala
TGC
[ENA]
¢þ
>WENV182808229
OJWD01000616
[OJWD] human gut metagenome; human gut
366
291
-
Lys
TTT
[ENA]
¢þ
>WENV182808239
OJWD01001997
[OJWD] human gut metagenome; human gut
368
442
+
Val
TAC
[ENA]
¢þ
>WENV182808230
OJWD01000702
[OJWD] human gut metagenome; human gut
387
311
-
Pro
CGG
[ENA]
¢þ
>WENV182808233
OJWD01001509
[OJWD] human gut metagenome; human gut
426
501
+
Thr
TGT
[ENA]
¢þ
>WENV182808240
OJWD01001997
[OJWD] human gut metagenome; human gut
444
516
+
Asp
GTC
[ENA]
¢þ
>WENV182808228
OJWD01000616
[OJWD] human gut metagenome; human gut
446
371
-
Val
TAC
[ENA]
¢þ
>WENV182808234
OJWD01001509
[OJWD] human gut metagenome; human gut
510
594
+
Tyr
GTA
[ENA]
¢þ
>WENV182808241
OJWD01001997
[OJWD] human gut metagenome; human gut
544
616
+
Lys
TTT
[ENA]
¢þ
>WENV182808227
OJWD01000616
[OJWD] human gut metagenome; human gut
552
477
-
Val
TAC
[ENA]
¢þ
>WENV182808242
OJWD01001997
[OJWD] human gut metagenome; human gut
622
704
+
Leu
TAG
[ENA]
¢þ
>WENV182808226
OJWD01000616
[OJWD] human gut metagenome; human gut
655
580
-
Lys
TTT
[ENA]
¢þ
>WENV182808243
OJWD01001997
[OJWD] human gut metagenome; human gut
708
779
+
Gly
GCC
[ENA]
¢þ
>WENV182808235
OJWD01001509
[OJWD] human gut metagenome; human gut
711
785
+
Gly
TCC
[ENA]
¢þ
>WENV182808244
OJWD01001997
[OJWD] human gut metagenome; human gut
785
870
+
Leu
TAA
[ENA]
¢þ
>WENV182808236
OJWD01001509
[OJWD] human gut metagenome; human gut
792
867
+
Thr
GGT
[ENA]
¢þ
>WENV182808249
OJWD01002451
[OJWD] human gut metagenome; human gut
856
769
-
Ser
TGA
[ENA]
¢þ
>WENV182808248
OJWD01002346
[OJWD] human gut metagenome; human gut
865
789
-
fMet
CAT
[ENA]
¢þ
>WENV182808251
OJWD01002674
[OJWD] human gut metagenome; human gut
876
802
-
Thr
TGT
[ENA]
¢þ
>WENV182808245
OJWD01001997
[OJWD] human gut metagenome; human gut
884
957
+
Arg
ACG
[ENA]
¢þ
>WENV182808246
OJWD01001997
[OJWD] human gut metagenome; human gut
986
1059
+
Pro
TGG
[ENA]
¢þ
>WENV182808225
OJWD01000480
[OJWD] human gut metagenome; human gut
1065
990
-
Asn
GTT
[ENA]
¢þ
>WENV182808237
OJWD01001532
[OJWD] human gut metagenome; human gut
1065
1139
+
Asn
GTT
[ENA]
¢þ
>WENV182808238
OJWD01001532
[OJWD] human gut metagenome; human gut
1145
1219
+
Gly
TCC
[ENA]
¢þ
>WENV182808232
OJWD01000771
[OJWD] human gut metagenome; human gut
1409
1482
+
Gly
CCC
[ENA]
¢þ
>WENV182808222
OJWD01000312
[OJWD] human gut metagenome; human gut
1629
1542
-
Ser
GGA
[ENA]
¢þ
>WENV182808223
OJWD01000320
[OJWD] human gut metagenome; human gut
2131
2206
+
Phe
GAA
[ENA]
¢þ
>WENV182808224
OJWD01000349
[OJWD] human gut metagenome; human gut
2408
2480
+
Arg
CCT
[ENA]
¢þ
>WENV182808218
OJWD01000057
[OJWD] human gut metagenome; human gut
2731
2655
-
Arg
ACG
[ENA]
¢þ
>WENV182808217
OJWD01000057
[OJWD] human gut metagenome; human gut
2828
2736
-
Ser
GCT
[ENA]
¢þ
>WENV182808221
OJWD01000158
[OJWD] human gut metagenome; human gut
3196
3272
+
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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