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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OJWI] human gut metagenome; human gut
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182808745
OJWI01001342
[OJWI] human gut metagenome; human gut
2
78
+
Met
CAT
[ENA]
¢þ
>WENV182808784
OJWI01005551
[OJWI] human gut metagenome; human gut
5
79
+
Val
TAC
[ENA]
¢þ
>WENV182808739
OJWI01000800
[OJWI] human gut metagenome; human gut
8
82
+
Lys
CTT
[ENA]
¢þ
>WENV182808793
OJWI01006041
[OJWI] human gut metagenome; human gut
8
84
+
Arg
TCT
[ENA]
¢þ
>WENV182808782
OJWI01005419
[OJWI] human gut metagenome; human gut
59
133
+
Trp
CCA
[ENA]
¢þ
>WENV182808773
OJWI01004614
[OJWI] human gut metagenome; human gut
76
151
+
Met
CAT
[ENA]
¢þ
>WENV182808785
OJWI01005551
[OJWI] human gut metagenome; human gut
84
158
+
Lys
TTT
[ENA]
¢þ
>WENV182808794
OJWI01006041
[OJWI] human gut metagenome; human gut
89
164
+
His
GTG
[ENA]
¢þ
>WENV182808757
OJWI01002230
[OJWI] human gut metagenome; human gut
95
168
+
Gly
TCC
[ENA]
¢þ
>WENV182808746
OJWI01001342
[OJWI] human gut metagenome; human gut
124
198
+
Gln
CTG
[ENA]
¢þ
>WENV182808770
OJWI01004091
[OJWI] human gut metagenome; human gut
138
213
+
Glu
TTC
[ENA]
¢þ
>WENV182808779
OJWI01005215
[OJWI] human gut metagenome; human gut
144
68
-
Leu
CAA
[ENA]
¢þ
>WENV182808772
OJWI01004354
[OJWI] human gut metagenome; human gut
144
70
-
Cys
GCA
[ENA]
¢þ
>WENV182808733
OJWI01000520
[OJWI] human gut metagenome; human gut
144
217
+
Pro
TGG
[ENA]
¢þ
>WENV182808795
OJWI01006041
[OJWI] human gut metagenome; human gut
170
244
+
Gln
TTG
[ENA]
¢þ
>WENV182808774
OJWI01004614
[OJWI] human gut metagenome; human gut
170
245
+
Ile2
CAT
[ENA]
¢þ
>WENV182808786
OJWI01005551
[OJWI] human gut metagenome; human gut
173
256
+
Leu
TAG
[ENA]
¢þ
>WENV182808791
OJWI01005872
[OJWI] human gut metagenome; human gut
201
285
+
Leu
CAG
[ENA]
¢þ
>WENV182808755
OJWI01001976
[OJWI] human gut metagenome; human gut
240
316
+
Arg
ACG
[ENA]
¢þ
>WENV182808754
OJWI01001854
[OJWI] human gut metagenome; human gut
245
155
-
Ser
GCT
[ENA]
¢þ
>WENV182808796
OJWI01006041
[OJWI] human gut metagenome; human gut
248
323
+
Lys
TTT
[ENA]
¢þ
>WENV182808759
OJWI01002311
[OJWI] human gut metagenome; human gut
257
184
-
Arg
CCG
[ENA]
¢þ
>WENV182808765
OJWI01002971
[OJWI] human gut metagenome; human gut
258
183
-
Lys
TTT
[ENA]
¢þ
>WENV182808787
OJWI01005551
[OJWI] human gut metagenome; human gut
262
337
+
Thr
TGT
[ENA]
¢þ
>WENV182808775
OJWI01004614
[OJWI] human gut metagenome; human gut
278
367
+
Ser
TGA
[ENA]
¢þ
>WENV182808747
OJWI01001342
[OJWI] human gut metagenome; human gut
296
370
+
Gln
CTG
[ENA]
¢þ
>WENV182808797
OJWI01006041
[OJWI] human gut metagenome; human gut
328
411
+
Leu
TAG
[ENA]
¢þ
>WENV182808707
OJWI01000021
[OJWI] human gut metagenome; human gut
331
407
+
Arg
TCT
[ENA]
¢þ
>WENV182808788
OJWI01005551
[OJWI] human gut metagenome; human gut
342
413
+
Gly
GCC
[ENA]
¢þ
>WENV182808753
OJWI01001854
[OJWI] human gut metagenome; human gut
361
271
-
Ser
TGA
[ENA]
¢þ
>WENV182808799
OJWI01006482
[OJWI] human gut metagenome; human gut
362
454
+
Ser
GCT
[ENA]
¢þ
>WENV182808781
OJWI01005370
[OJWI] human gut metagenome; human gut
384
469
+
Leu
AAG
[ENA]
¢þ
>WENV182808776
OJWI01004614
[OJWI] human gut metagenome; human gut
400
475
+
fMet
CAT
[ENA]
¢þ
>WENV182808798
OJWI01006041
[OJWI] human gut metagenome; human gut
415
489
+
Gly
GCC
[ENA]
¢þ
>WENV182808789
OJWI01005551
[OJWI] human gut metagenome; human gut
429
514
+
Leu
TAA
[ENA]
¢þ
>WENV182808783
OJWI01005530
[OJWI] human gut metagenome; human gut
433
509
+
fMet
CAT
[ENA]
¢þ
>WENV182808792
OJWI01006019
[OJWI] human gut metagenome; human gut
453
528
+
Thr
CGT
[ENA]
¢þ
>WENV182808780
OJWI01005299
[OJWI] human gut metagenome; human gut
496
568
+
Thr
CGT
[ENA]
¢þ
>WENV182808723
OJWI01000207
[OJWI] human gut metagenome; human gut
513
438
-
Arg
TCT
[ENA]
¢þ
>WENV182808777
OJWI01004614
[OJWI] human gut metagenome; human gut
513
589
+
Asp
GTC
[ENA]
¢þ
>WENV182808750
OJWI01001574
[OJWI] human gut metagenome; human gut
528
452
-
Pro
GGG
[ENA]
¢þ
>WENV182808771
OJWI01004320
[OJWI] human gut metagenome; human gut
528
598
+
Cys
GCA
[ENA]
¢þ
>WENV182808790
OJWI01005551
[OJWI] human gut metagenome; human gut
529
602
+
Arg
ACG
[ENA]
¢þ
>WENV182808778
OJWI01004614
[OJWI] human gut metagenome; human gut
591
661
+
Gly
TCC
[ENA]
¢þ
>WENV182808744
OJWI01001208
[OJWI] human gut metagenome; human gut
631
702
+
Trp
CCA
[ENA]
¢þ
>WENV182808767
OJWI01003547
[OJWI] human gut metagenome; human gut
652
723
+
Gln
TTG
[ENA]
¢þ
>WENV182808769
OJWI01003927
[OJWI] human gut metagenome; human gut
767
695
-
Lys
CTT
[ENA]
¢þ
>WENV182808768
OJWI01003731
[OJWI] human gut metagenome; human gut
824
899
+
Thr
CGT
[ENA]
¢þ
>WENV182808762
OJWI01002781
[OJWI] human gut metagenome; human gut
892
980
+
Leu
TAA
[ENA]
¢þ
>WENV182808766
OJWI01003352
[OJWI] human gut metagenome; human gut
901
826
-
Trp
CCA
[ENA]
¢þ
>WENV182808763
OJWI01002781
[OJWI] human gut metagenome; human gut
1000
1075
+
fMet
CAT
[ENA]
¢þ
>WENV182808761
OJWI01002720
[OJWI] human gut metagenome; human gut
1011
936
-
Lys
CTT
[ENA]
¢þ
>WENV182808741
OJWI01000955
[OJWI] human gut metagenome; human gut
1046
970
-
Asp
GTC
[ENA]
¢þ
>WENV182808764
OJWI01002781
[OJWI] human gut metagenome; human gut
1082
1158
+
Met
CAT
[ENA]
¢þ
>WENV182808758
OJWI01002275
[OJWI] human gut metagenome; human gut
1089
1013
-
fMet
CAT
[ENA]
¢þ
>WENV182808760
OJWI01002510
[OJWI] human gut metagenome; human gut
1285
1212
-
Arg
CCT
[ENA]
¢þ
>WENV182808756
OJWI01002023
[OJWI] human gut metagenome; human gut
1512
1426
-
Leu
GAG
[ENA]
¢þ
>WENV182808735
OJWI01000528
[OJWI] human gut metagenome; human gut
1536
1447
-
Ser
CGA
[ENA]
¢þ
>WENV182808748
OJWI01001443
[OJWI] human gut metagenome; human gut
1750
1826
+
Pro
CGG
[ENA]
¢þ
>WENV182808737
OJWI01000671
[OJWI] human gut metagenome; human gut
1827
1752
-
Phe
GAA
[ENA]
¢þ
>WENV182808752
OJWI01001642
[OJWI] human gut metagenome; human gut
2159
2085
-
Ala
TGC
[ENA]
¢þ
>WENV182808712
OJWI01000041
[OJWI] human gut metagenome; human gut
2240
2151
-
Ser
CGA
[ENA]
¢þ
>WENV182808731
OJWI01000448
[OJWI] human gut metagenome; human gut
2272
2186
-
Leu
GAG
[ENA]
¢þ
>WENV182808749
OJWI01001479
[OJWI] human gut metagenome; human gut
2300
2382
+
Leu
CAA
[ENA]
¢þ
>WENV182808751
OJWI01001610
[OJWI] human gut metagenome; human gut
2302
2229
-
Glu
TTC
[ENA]
¢þ
>WENV182808711
OJWI01000040
[OJWI] human gut metagenome; human gut
2383
2308
-
Asn
GTT
[ENA]
¢þ
>WENV182808734
OJWI01000528
[OJWI] human gut metagenome; human gut
2528
2603
+
Asn
GTT
[ENA]
¢þ
>WENV182808742
OJWI01001181
[OJWI] human gut metagenome; human gut
2786
2869
+
Leu
TAG
[ENA]
¢þ
>WENV182808743
OJWI01001181
[OJWI] human gut metagenome; human gut
2875
2949
+
Gly
GCC
[ENA]
¢þ
>WENV182808729
OJWI01000375
[OJWI] human gut metagenome; human gut
2946
2859
-
Ser
GGA
[ENA]
¢þ
>WENV182808717
OJWI01000121
[OJWI] human gut metagenome; human gut
2948
3023
+
Thr
GGT
[ENA]
¢þ
>WENV182808740
OJWI01000945
[OJWI] human gut metagenome; human gut
2983
3059
+
Asp
GTC
[ENA]
¢þ
>WENV182808728
OJWI01000371
[OJWI] human gut metagenome; human gut
3132
3045
-
Ser
GGA
[ENA]
¢þ
>WENV182808716
OJWI01000083
[OJWI] human gut metagenome; human gut
3681
3594
-
Ser
TGA
[ENA]
¢þ
>WENV182808724
OJWI01000225
[OJWI] human gut metagenome; human gut
4463
4547
+
Leu
CAA
[ENA]
¢þ
>WENV182808718
OJWI01000133
[OJWI] human gut metagenome; human gut
4649
4724
+
Phe
GAA
[ENA]
¢þ
>WENV182808738
OJWI01000785
[OJWI] human gut metagenome; human gut
4739
4825
+
Leu
CAG
[ENA]
¢þ
>WENV182808736
OJWI01000534
[OJWI] human gut metagenome; human gut
4854
4779
-
Ile2
CAT
[ENA]
¢þ
>WENV182808726
OJWI01000232
[OJWI] human gut metagenome; human gut
5196
5107
-
Ser
CGA
[ENA]
¢þ
>WENV182808732
OJWI01000499
[OJWI] human gut metagenome; human gut
5785
5710
-
Asn
GTT
[ENA]
¢þ
>WENV182808725
OJWI01000232
[OJWI] human gut metagenome; human gut
6188
6263
+
Asn
GTT
[ENA]
¢þ
>WENV182808722
OJWI01000167
[OJWI] human gut metagenome; human gut
6802
6729
-
Gln
TTG
[ENA]
¢þ
>WENV182808721
OJWI01000167
[OJWI] human gut metagenome; human gut
6892
6810
-
Tyr
GTA
[ENA]
¢þ
>WENV182808714
OJWI01000065
[OJWI] human gut metagenome; human gut
7653
7726
+
Arg
CCT
[ENA]
¢þ
>WENV182808730
OJWI01000378
[OJWI] human gut metagenome; human gut
8092
7998
-
SeC
TCA
[ENA]
¢þ
>WENV182808727
OJWI01000233
[OJWI] human gut metagenome; human gut
10558
10633
+
Asn
GTT
[ENA]
¢þ
>WENV182808715
OJWI01000082
[OJWI] human gut metagenome; human gut
13158
13231
+
Glu
TTC
[ENA]
¢þ
>WENV182808713
OJWI01000047
[OJWI] human gut metagenome; human gut
14613
14538
-
Arg
CCT
[ENA]
¢þ
>WENV182808720
OJWI01000148
[OJWI] human gut metagenome; human gut
16796
16711
-
Leu
CAA
[ENA]
¢þ
>WENV182808719
OJWI01000148
[OJWI] human gut metagenome; human gut
16879
16809
-
Cys
GCA
[ENA]
¢þ
>WENV182808708
OJWI01000021
[OJWI] human gut metagenome; human gut
17434
17508
+
Asn
GTT
[ENA]
¢þ
>WENV182808710
OJWI01000040
[OJWI] human gut metagenome; human gut
26308
26233
-
Asn
GTT
[ENA]
¢þ
>WENV182808709
OJWI01000040
[OJWI] human gut metagenome; human gut
28084
28159
+
Asn
GTT
[ENA]
¢þ
>WENV182808706
OJWI01000017
[OJWI] human gut metagenome; human gut
45710
45782
+
Thr
CGT
[ENA]
¢þ
>WENV182808705
OJWI01000003
[OJWI] human gut metagenome; human gut
55417
55489
+
Thr
GGT
[ENA]
¢þ
>WENV182808704
OJWI01000001
[OJWI] human gut metagenome; human gut
69666
69579
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK