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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJWU] human gut metagenome; human gut
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182809945
OJWU01000160
[OJWU] human gut metagenome; human gut
6
100
+
SeC
TCA
[ENA]
¢þ
>WENV182809952
OJWU01000252
[OJWU] human gut metagenome; human gut
9
95
+
Leu
CAG
[ENA]
¢þ
>WENV182809951
OJWU01000247
[OJWU] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182809955
OJWU01000304
[OJWU] human gut metagenome; human gut
67
141
+
Gln
CTG
[ENA]
¢þ
>WENV182809925
OJWU01000060
[OJWU] human gut metagenome; human gut
101
176
+
Trp
CCA
[ENA]
¢þ
>WENV182809973
OJWU01000918
[OJWU] human gut metagenome; human gut
169
94
-
Ala
GGC
[ENA]
¢þ
>WENV182809968
OJWU01000490
[OJWU] human gut metagenome; human gut
179
105
-
Gln
TTG
[ENA]
¢þ
>WENV182809981
OJWU01001401
[OJWU] human gut metagenome; human gut
214
127
-
Ser
GGA
[ENA]
¢þ
>WENV182809982
OJWU01001418
[OJWU] human gut metagenome; human gut
250
325
+
Lys
CTT
[ENA]
¢þ
>WENV182809967
OJWU01000490
[OJWU] human gut metagenome; human gut
259
183
-
Met
CAT
[ENA]
¢þ
>WENV182809966
OJWU01000482
[OJWU] human gut metagenome; human gut
330
254
-
fMet
CAT
[ENA]
¢þ
>WENV182809965
OJWU01000482
[OJWU] human gut metagenome; human gut
480
391
-
Leu
GAG
[ENA]
¢þ
>WENV182809988
OJWU01002180
[OJWU] human gut metagenome; human gut
504
576
+
Ala
TGC
[ENA]
¢þ
>WENV182809987
OJWU01002140
[OJWU] human gut metagenome; human gut
548
623
+
Glu
TTC
[ENA]
¢þ
>WENV182809986
OJWU01001797
[OJWU] human gut metagenome; human gut
636
565
-
Cys
GCA
[ENA]
¢þ
>WENV182809963
OJWU01000441
[OJWU] human gut metagenome; human gut
671
585
-
Leu
TAA
[ENA]
¢þ
>WENV182809962
OJWU01000441
[OJWU] human gut metagenome; human gut
750
677
-
Cys
GCA
[ENA]
¢þ
>WENV182809970
OJWU01000711
[OJWU] human gut metagenome; human gut
777
864
+
Ser
TGA
[ENA]
¢þ
>WENV182809978
OJWU01001050
[OJWU] human gut metagenome; human gut
780
853
+
Gly
CCC
[ENA]
¢þ
>WENV182809961
OJWU01000441
[OJWU] human gut metagenome; human gut
851
776
-
Gly
GCC
[ENA]
¢þ
>WENV182809971
OJWU01000711
[OJWU] human gut metagenome; human gut
871
946
+
Thr
TGT
[ENA]
¢þ
>WENV182809985
OJWU01001610
[OJWU] human gut metagenome; human gut
939
1014
+
Thr
TGT
[ENA]
¢þ
>WENV182809984
OJWU01001581
[OJWU] human gut metagenome; human gut
989
1064
+
Lys
TTT
[ENA]
¢þ
>WENV182809983
OJWU01001511
[OJWU] human gut metagenome; human gut
1098
1172
+
Arg
CCT
[ENA]
¢þ
>WENV182809977
OJWU01000988
[OJWU] human gut metagenome; human gut
1310
1234
-
Pro
GGG
[ENA]
¢þ
>WENV182809972
OJWU01000869
[OJWU] human gut metagenome; human gut
1310
1237
-
Gly
CCC
[ENA]
¢þ
>WENV182809954
OJWU01000293
[OJWU] human gut metagenome; human gut
1388
1464
+
Arg
TCT
[ENA]
¢þ
>WENV182809964
OJWU01000463
[OJWU] human gut metagenome; human gut
1565
1471
-
SeC
TCA
[ENA]
¢þ
>WENV182809960
OJWU01000414
[OJWU] human gut metagenome; human gut
1745
1820
+
Ile2
CAT
[ENA]
¢þ
>WENV182809980
OJWU01001120
[OJWU] human gut metagenome; human gut
1940
1856
-
Leu
CAA
[ENA]
¢þ
>WENV182809979
OJWU01001072
[OJWU] human gut metagenome; human gut
2117
2193
+
Ile2
CAT
[ENA]
¢þ
>WENV182809975
OJWU01000951
[OJWU] human gut metagenome; human gut
2508
2583
+
Ile2
CAT
[ENA]
¢þ
>WENV182809976
OJWU01000951
[OJWU] human gut metagenome; human gut
2591
2667
+
Arg
TCG
[ENA]
¢þ
>WENV182809944
OJWU01000156
[OJWU] human gut metagenome; human gut
2650
2575
-
Phe
GAA
[ENA]
¢þ
>WENV182809974
OJWU01000928
[OJWU] human gut metagenome; human gut
2701
2776
+
Ala
GGC
[ENA]
¢þ
>WENV182809969
OJWU01000703
[OJWU] human gut metagenome; human gut
2967
2891
-
fMet
CAT
[ENA]
¢þ
>WENV182809948
OJWU01000206
[OJWU] human gut metagenome; human gut
3133
3046
-
Ser
GGA
[ENA]
¢þ
>WENV182809958
OJWU01000382
[OJWU] human gut metagenome; human gut
3995
3909
-
Leu
GAG
[ENA]
¢þ
>WENV182809901
OJWU01000027
[OJWU] human gut metagenome; human gut
5345
5256
-
Ser
CGA
[ENA]
¢þ
>WENV182809931
OJWU01000071
[OJWU] human gut metagenome; human gut
5376
5302
-
Gln
CTG
[ENA]
¢þ
>WENV182809959
OJWU01000390
[OJWU] human gut metagenome; human gut
5422
5508
+
Leu
GAG
[ENA]
¢þ
>WENV182809930
OJWU01000071
[OJWU] human gut metagenome; human gut
5501
5425
-
Met
CAT
[ENA]
¢þ
>WENV182809929
OJWU01000071
[OJWU] human gut metagenome; human gut
5591
5517
-
Gln
TTG
[ENA]
¢þ
>WENV182809928
OJWU01000071
[OJWU] human gut metagenome; human gut
5699
5615
-
Leu
TAG
[ENA]
¢þ
>WENV182809927
OJWU01000071
[OJWU] human gut metagenome; human gut
5786
5710
-
Met
CAT
[ENA]
¢þ
>WENV182809943
OJWU01000138
[OJWU] human gut metagenome; human gut
5865
5790
-
Phe
GAA
[ENA]
¢þ
>WENV182809897
OJWU01000027
[OJWU] human gut metagenome; human gut
6337
6412
+
Asn
GTT
[ENA]
¢þ
>WENV182809941
OJWU01000109
[OJWU] human gut metagenome; human gut
7555
7639
+
Tyr
GTA
[ENA]
¢þ
>WENV182809956
OJWU01000334
[OJWU] human gut metagenome; human gut
7572
7656
+
Tyr
GTA
[ENA]
¢þ
>WENV182809957
OJWU01000376
[OJWU] human gut metagenome; human gut
8194
8270
+
Asp
GTC
[ENA]
¢þ
>WENV182809953
OJWU01000259
[OJWU] human gut metagenome; human gut
8264
8189
-
Asn
GTT
[ENA]
¢þ
>WENV182809919
OJWU01000052
[OJWU] human gut metagenome; human gut
9043
8968
-
Asn
GTT
[ENA]
¢þ
>WENV182809881
OJWU01000009
[OJWU] human gut metagenome; human gut
9407
9483
+
Asp
GTC
[ENA]
¢þ
>WENV182809916
OJWU01000052
[OJWU] human gut metagenome; human gut
10792
10867
+
Asn
GTT
[ENA]
¢þ
>WENV182809926
OJWU01000069
[OJWU] human gut metagenome; human gut
13035
12959
-
Pro
GGG
[ENA]
¢þ
>WENV182809878
OJWU01000007
[OJWU] human gut metagenome; human gut
13539
13626
+
Ser
GGA
[ENA]
¢þ
>WENV182809923
OJWU01000057
[OJWU] human gut metagenome; human gut
14552
14626
+
Arg
CCT
[ENA]
¢þ
>WENV182809932
OJWU01000075
[OJWU] human gut metagenome; human gut
14792
14867
+
Phe
GAA
[ENA]
¢þ
>WENV182809934
OJWU01000085
[OJWU] human gut metagenome; human gut
16857
16785
-
Arg
CCT
[ENA]
¢þ
>WENV182809950
OJWU01000208
[OJWU] human gut metagenome; human gut
17189
17265
+
Pro
CGG
[ENA]
¢þ
>WENV182809911
OJWU01000039
[OJWU] human gut metagenome; human gut
20114
20201
+
Ser
TGA
[ENA]
¢þ
>WENV182809949
OJWU01000207
[OJWU] human gut metagenome; human gut
20341
20266
-
Asn
GTT
[ENA]
¢þ
>WENV182809924
OJWU01000059
[OJWU] human gut metagenome; human gut
21000
20928
-
Arg
CCT
[ENA]
¢þ
>WENV182809940
OJWU01000105
[OJWU] human gut metagenome; human gut
21153
21247
+
SeC
TCA
[ENA]
¢þ
>WENV182809947
OJWU01000185
[OJWU] human gut metagenome; human gut
22963
22887
-
Asp
GTC
[ENA]
¢þ
>WENV182809884
OJWU01000013
[OJWU] human gut metagenome; human gut
26189
26114
-
Arg
TCT
[ENA]
¢þ
>WENV182809918
OJWU01000052
[OJWU] human gut metagenome; human gut
26384
26309
-
Asn
GTT
[ENA]
¢þ
>WENV182809946
OJWU01000166
[OJWU] human gut metagenome; human gut
27930
28014
+
Leu
CAA
[ENA]
¢þ
>WENV182809917
OJWU01000052
[OJWU] human gut metagenome; human gut
28844
28769
-
Asn
GTT
[ENA]
¢þ
>WENV182809942
OJWU01000131
[OJWU] human gut metagenome; human gut
30415
30331
-
Tyr
GTA
[ENA]
¢þ
>WENV182809882
OJWU01000009
[OJWU] human gut metagenome; human gut
32683
32758
+
Thr
CGT
[ENA]
¢þ
>WENV182809920
OJWU01000055
[OJWU] human gut metagenome; human gut
32937
33012
+
Phe
GAA
[ENA]
¢þ
>WENV182809895
OJWU01000023
[OJWU] human gut metagenome; human gut
34475
34562
+
Ser
GGA
[ENA]
¢þ
>WENV182809896
OJWU01000023
[OJWU] human gut metagenome; human gut
37636
37723
+
Ser
GGA
[ENA]
¢þ
>WENV182809935
OJWU01000089
[OJWU] human gut metagenome; human gut
42165
42241
+
Pro
TGG
[ENA]
¢þ
>WENV182809900
OJWU01000027
[OJWU] human gut metagenome; human gut
46302
46227
-
Asn
GTT
[ENA]
¢þ
>WENV182809883
OJWU01000013
[OJWU] human gut metagenome; human gut
46617
46541
-
Arg
TCT
[ENA]
¢þ
>WENV182809899
OJWU01000027
[OJWU] human gut metagenome; human gut
48711
48636
-
Asn
GTT
[ENA]
¢þ
>WENV182809875
OJWU01000005
[OJWU] human gut metagenome; human gut
49177
49264
+
Ser
GGA
[ENA]
¢þ
>WENV182809936
OJWU01000089
[OJWU] human gut metagenome; human gut
49864
49939
+
Thr
TGT
[ENA]
¢þ
>WENV182809937
OJWU01000089
[OJWU] human gut metagenome; human gut
49948
50032
+
Tyr
GTA
[ENA]
¢þ
>WENV182809938
OJWU01000089
[OJWU] human gut metagenome; human gut
50149
50223
+
Gly
TCC
[ENA]
¢þ
>WENV182809939
OJWU01000089
[OJWU] human gut metagenome; human gut
50230
50305
+
Thr
GGT
[ENA]
¢þ
>WENV182809898
OJWU01000027
[OJWU] human gut metagenome; human gut
50460
50535
+
Asn
GTT
[ENA]
¢þ
>WENV182809892
OJWU01000020
[OJWU] human gut metagenome; human gut
50924
50851
-
Gly
CCC
[ENA]
¢þ
>WENV182809933
OJWU01000084
[OJWU] human gut metagenome; human gut
52348
52424
+
Met
CAT
[ENA]
¢þ
>WENV182809922
OJWU01000056
[OJWU] human gut metagenome; human gut
52876
52800
-
Val
GAC
[ENA]
¢þ
>WENV182809921
OJWU01000056
[OJWU] human gut metagenome; human gut
52957
52881
-
Val
GAC
[ENA]
¢þ
>WENV182809904
OJWU01000032
[OJWU] human gut metagenome; human gut
62483
62570
+
Ser
TGA
[ENA]
¢þ
>WENV182809914
OJWU01000047
[OJWU] human gut metagenome; human gut
65366
65442
+
Val
GAC
[ENA]
¢þ
>WENV182809915
OJWU01000047
[OJWU] human gut metagenome; human gut
65447
65523
+
Val
GAC
[ENA]
¢þ
>WENV182809912
OJWU01000040
[OJWU] human gut metagenome; human gut
66613
66538
-
Ile2
CAT
[ENA]
¢þ
>WENV182809905
OJWU01000032
[OJWU] human gut metagenome; human gut
68917
69004
+
Ser
TGA
[ENA]
¢þ
>WENV182809903
OJWU01000031
[OJWU] human gut metagenome; human gut
69462
69387
-
Phe
GAA
[ENA]
¢þ
>WENV182809913
OJWU01000042
[OJWU] human gut metagenome; human gut
76608
76535
-
Gly
CCC
[ENA]
¢þ
>WENV182809910
OJWU01000038
[OJWU] human gut metagenome; human gut
78320
78244
-
Pro
TGG
[ENA]
¢þ
>WENV182809909
OJWU01000038
[OJWU] human gut metagenome; human gut
78449
78363
-
Leu
CAG
[ENA]
¢þ
>WENV182809908
OJWU01000038
[OJWU] human gut metagenome; human gut
78545
78470
-
His
GTG
[ENA]
¢þ
>WENV182809907
OJWU01000038
[OJWU] human gut metagenome; human gut
78680
78604
-
Arg
CCG
[ENA]
¢þ
>WENV182809877
OJWU01000006
[OJWU] human gut metagenome; human gut
80352
80427
+
Ile2
CAT
[ENA]
¢þ
>WENV182809890
OJWU01000018
[OJWU] human gut metagenome; human gut
88171
88246
+
Thr
CGT
[ENA]
¢þ
>WENV182809894
OJWU01000022
[OJWU] human gut metagenome; human gut
88556
88632
+
Arg
TCT
[ENA]
¢þ
>WENV182809874
OJWU01000003
[OJWU] human gut metagenome; human gut
90028
90104
+
Pro
GGG
[ENA]
¢þ
>WENV182809886
OJWU01000015
[OJWU] human gut metagenome; human gut
92597
92513
-
Leu
CAA
[ENA]
¢þ
>WENV182809906
OJWU01000037
[OJWU] human gut metagenome; human gut
93553
93629
+
Arg
TCT
[ENA]
¢þ
>WENV182809891
OJWU01000019
[OJWU] human gut metagenome; human gut
98827
98733
-
SeC
TCA
[ENA]
¢þ
>WENV182809876
OJWU01000005
[OJWU] human gut metagenome; human gut
101290
101377
+
Ser
TGA
[ENA]
¢þ
>WENV182809902
OJWU01000028
[OJWU] human gut metagenome; human gut
101860
101933
+
Thr
CGT
[ENA]
¢þ
>WENV182809879
OJWU01000008
[OJWU] human gut metagenome; human gut
109129
109205
+
Val
GAC
[ENA]
¢þ
>WENV182809880
OJWU01000008
[OJWU] human gut metagenome; human gut
109210
109286
+
Val
GAC
[ENA]
¢þ
>WENV182809893
OJWU01000021
[OJWU] human gut metagenome; human gut
116006
116098
+
Ser
GCT
[ENA]
¢þ
>WENV182809889
OJWU01000017
[OJWU] human gut metagenome; human gut
120029
119943
-
Leu
TAA
[ENA]
¢þ
>WENV182809888
OJWU01000017
[OJWU] human gut metagenome; human gut
120115
120042
-
Cys
GCA
[ENA]
¢þ
>WENV182809887
OJWU01000017
[OJWU] human gut metagenome; human gut
120244
120169
-
Gly
GCC
[ENA]
¢þ
>WENV182809885
OJWU01000014
[OJWU] human gut metagenome; human gut
120375
120299
-
Pro
CGG
[ENA]
¢þ
>WENV182809873
OJWU01000002
[OJWU] human gut metagenome; human gut
153251
153327
+
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK