This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJXR] human gut metagenome; human gut
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182812241
OJXR01001513
[OJXR] human gut metagenome; human gut
47
133
+
Leu
GAG
[ENA]
¢þ
>WENV182812204
OJXR01000435
[OJXR] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182812258
OJXR01004030
[OJXR] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182812214
OJXR01000458
[OJXR] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182812230
OJXR01000846
[OJXR] human gut metagenome; human gut
71
155
+
Leu
CAA
[ENA]
¢þ
>WENV182812256
OJXR01003699
[OJXR] human gut metagenome; human gut
84
170
+
Leu
CAG
[ENA]
¢þ
>WENV182812251
OJXR01002371
[OJXR] human gut metagenome; human gut
91
166
+
Arg
CCT
[ENA]
¢þ
>WENV182812240
OJXR01001292
[OJXR] human gut metagenome; human gut
144
217
+
Arg
CCG
[ENA]
¢þ
>WENV182812205
OJXR01000435
[OJXR] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182812215
OJXR01000458
[OJXR] human gut metagenome; human gut
151
226
+
Asp
GTC
[ENA]
¢þ
>WENV182812228
OJXR01000759
[OJXR] human gut metagenome; human gut
167
92
-
Trp
CCA
[ENA]
¢þ
>WENV182812229
OJXR01000816
[OJXR] human gut metagenome; human gut
197
111
-
Leu
GAG
[ENA]
¢þ
>WENV182812267
OJXR01005528
[OJXR] human gut metagenome; human gut
198
125
-
Thr
GGT
[ENA]
¢þ
>WENV182812238
OJXR01001238
[OJXR] human gut metagenome; human gut
214
308
+
SeC
TCA
[ENA]
¢þ
>WENV182812244
OJXR01002118
[OJXR] human gut metagenome; human gut
218
293
+
Gly
GCC
[ENA]
¢þ
>WENV182812206
OJXR01000435
[OJXR] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182812263
OJXR01005088
[OJXR] human gut metagenome; human gut
248
331
+
Leu
CAG
[ENA]
¢þ
>WENV182812262
OJXR01004453
[OJXR] human gut metagenome; human gut
261
189
-
Gln
CTG
[ENA]
¢þ
>WENV182812268
OJXR01006376
[OJXR] human gut metagenome; human gut
265
336
+
Gly
CCC
[ENA]
¢þ
>WENV182812216
OJXR01000458
[OJXR] human gut metagenome; human gut
272
344
+
Phe
GAA
[ENA]
¢þ
>WENV182812227
OJXR01000759
[OJXR] human gut metagenome; human gut
296
220
-
Asp
GTC
[ENA]
¢þ
>WENV182812207
OJXR01000435
[OJXR] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182812245
OJXR01002118
[OJXR] human gut metagenome; human gut
345
418
+
Cys
GCA
[ENA]
¢þ
>WENV182812217
OJXR01000458
[OJXR] human gut metagenome; human gut
349
431
+
Tyr
GTA
[ENA]
¢þ
>WENV182812257
OJXR01003809
[OJXR] human gut metagenome; human gut
352
279
-
Ala
TGC
[ENA]
¢þ
>WENV182812265
OJXR01005383
[OJXR] human gut metagenome; human gut
377
303
-
Leu
TAA
[ENA]
¢þ
>WENV182812202
OJXR01000185
[OJXR] human gut metagenome; human gut
379
451
+
Thr
CGT
[ENA]
¢þ
>WENV182812255
OJXR01003265
[OJXR] human gut metagenome; human gut
400
483
+
Leu
TAG
[ENA]
¢þ
>WENV182812208
OJXR01000435
[OJXR] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182812264
OJXR01005115
[OJXR] human gut metagenome; human gut
407
480
+
Arg
CCG
[ENA]
¢þ
>WENV182812246
OJXR01002118
[OJXR] human gut metagenome; human gut
430
516
+
Leu
TAA
[ENA]
¢þ
>WENV182812218
OJXR01000458
[OJXR] human gut metagenome; human gut
435
508
+
Trp
CCA
[ENA]
¢þ
>WENV182812248
OJXR01002181
[OJXR] human gut metagenome; human gut
436
360
-
Arg
ACG
[ENA]
¢þ
>WENV182812260
OJXR01004446
[OJXR] human gut metagenome; human gut
472
547
+
Thr
TGT
[ENA]
¢þ
>WENV182812266
OJXR01005528
[OJXR] human gut metagenome; human gut
484
403
-
Tyr
GTA
[ENA]
¢þ
>WENV182812209
OJXR01000435
[OJXR] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182812247
OJXR01002181
[OJXR] human gut metagenome; human gut
533
441
-
Ser
GCT
[ENA]
¢þ
>WENV182812253
OJXR01002970
[OJXR] human gut metagenome; human gut
533
607
+
Asn
GTT
[ENA]
¢þ
>WENV182812219
OJXR01000458
[OJXR] human gut metagenome; human gut
545
618
+
His
GTG
[ENA]
¢þ
>WENV182812261
OJXR01004446
[OJXR] human gut metagenome; human gut
553
636
+
Tyr
GTA
[ENA]
¢þ
>WENV182812239
OJXR01001289
[OJXR] human gut metagenome; human gut
557
632
+
Asn
GTT
[ENA]
¢þ
>WENV182812210
OJXR01000435
[OJXR] human gut metagenome; human gut
589
662
+
Pro
TGG
[ENA]
¢þ
>WENV182812254
OJXR01002970
[OJXR] human gut metagenome; human gut
613
687
+
Thr
TGT
[ENA]
¢þ
>WENV182812231
OJXR01000950
[OJXR] human gut metagenome; human gut
616
692
+
Asp
GTC
[ENA]
¢þ
>WENV182812220
OJXR01000458
[OJXR] human gut metagenome; human gut
631
704
+
Gln
TTG
[ENA]
¢þ
>WENV182812211
OJXR01000435
[OJXR] human gut metagenome; human gut
675
749
+
Ala
TGC
[ENA]
¢þ
>WENV182812249
OJXR01002207
[OJXR] human gut metagenome; human gut
689
600
-
Ser
CGA
[ENA]
¢þ
>WENV182812232
OJXR01000950
[OJXR] human gut metagenome; human gut
694
764
+
Gly
TCC
[ENA]
¢þ
>WENV182812259
OJXR01004163
[OJXR] human gut metagenome; human gut
702
628
-
Arg
CCT
[ENA]
¢þ
>WENV182812250
OJXR01002247
[OJXR] human gut metagenome; human gut
722
646
-
fMet
CAT
[ENA]
¢þ
>WENV182812221
OJXR01000458
[OJXR] human gut metagenome; human gut
729
799
+
Cys
GCA
[ENA]
¢þ
>WENV182812224
OJXR01000508
[OJXR] human gut metagenome; human gut
761
686
-
Arg
TCT
[ENA]
¢þ
>WENV182812212
OJXR01000435
[OJXR] human gut metagenome; human gut
771
846
+
Met
CAT
[ENA]
¢þ
>WENV182812233
OJXR01000950
[OJXR] human gut metagenome; human gut
773
848
+
Ile
GAT
[ENA]
¢þ
>WENV182812226
OJXR01000639
[OJXR] human gut metagenome; human gut
783
858
+
Thr
CGT
[ENA]
¢þ
>WENV182812243
OJXR01002075
[OJXR] human gut metagenome; human gut
790
865
+
His
GTG
[ENA]
¢þ
>WENV182812222
OJXR01000458
[OJXR] human gut metagenome; human gut
812
897
+
Leu
CAA
[ENA]
¢þ
>WENV182812252
OJXR01002768
[OJXR] human gut metagenome; human gut
838
763
-
Lys
TTT
[ENA]
¢þ
>WENV182812234
OJXR01000950
[OJXR] human gut metagenome; human gut
857
946
+
Ser
GCT
[ENA]
¢þ
>WENV182812200
OJXR01000022
[OJXR] human gut metagenome; human gut
861
936
+
Glu
TTC
[ENA]
¢þ
>WENV182812213
OJXR01000435
[OJXR] human gut metagenome; human gut
865
940
+
Ile2
CAT
[ENA]
¢þ
>WENV182812235
OJXR01000950
[OJXR] human gut metagenome; human gut
960
1033
+
Glu
TTC
[ENA]
¢þ
>WENV182812242
OJXR01001537
[OJXR] human gut metagenome; human gut
1015
1102
+
Ser
GGA
[ENA]
¢þ
>WENV182812236
OJXR01001015
[OJXR] human gut metagenome; human gut
1036
962
-
Ile2
CAT
[ENA]
¢þ
>WENV182812203
OJXR01000312
[OJXR] human gut metagenome; human gut
1190
1266
+
Pro
GGG
[ENA]
¢þ
>WENV182812225
OJXR01000546
[OJXR] human gut metagenome; human gut
1277
1204
-
Gly
CCC
[ENA]
¢þ
>WENV182812223
OJXR01000474
[OJXR] human gut metagenome; human gut
1295
1210
-
Ser
GGA
[ENA]
¢þ
>WENV182812237
OJXR01001122
[OJXR] human gut metagenome; human gut
1329
1253
-
Arg
TCT
[ENA]
¢þ
>WENV182812201
OJXR01000067
[OJXR] human gut metagenome; human gut
2294
2369
+
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK