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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJXU] human gut metagenome; human gut
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182812708
OJXU01001352
[OJXU] human gut metagenome; human gut
57
146
+
Ser
TGA
[ENA]
¢þ
>WENV182812693
OJXU01000288
[OJXU] human gut metagenome; human gut
60
134
+
Gly
GCC
[ENA]
¢þ
>WENV182812706
OJXU01000737
[OJXU] human gut metagenome; human gut
65
150
+
Leu
GAG
[ENA]
¢þ
>WENV182812649
OJXU01000024
[OJXU] human gut metagenome; human gut
68
149
+
Tyr
GTA
[ENA]
¢þ
>WENV182812739
OJXU01006349
[OJXU] human gut metagenome; human gut
70
143
+
Thr
GGT
[ENA]
¢þ
>WENV182812735
OJXU01005264
[OJXU] human gut metagenome; human gut
117
192
+
His
GTG
[ENA]
¢þ
>WENV182812734
OJXU01005251
[OJXU] human gut metagenome; human gut
127
52
-
His
GTG
[ENA]
¢þ
>WENV182812742
OJXU01006708
[OJXU] human gut metagenome; human gut
139
63
-
Pro
CGG
[ENA]
¢þ
>WENV182812694
OJXU01000288
[OJXU] human gut metagenome; human gut
144
218
+
Cys
GCA
[ENA]
¢þ
>WENV182812738
OJXU01005963
[OJXU] human gut metagenome; human gut
157
244
+
Ser
CGA
[ENA]
¢þ
>WENV182812709
OJXU01001352
[OJXU] human gut metagenome; human gut
160
235
+
fMet
CAT
[ENA]
¢þ
>WENV182812741
OJXU01006501
[OJXU] human gut metagenome; human gut
168
93
-
Ala
TGC
[ENA]
¢þ
>WENV182812650
OJXU01000024
[OJXU] human gut metagenome; human gut
179
251
+
Thr
TGT
[ENA]
¢þ
>WENV182812733
OJXU01005251
[OJXU] human gut metagenome; human gut
208
132
-
Arg
TCT
[ENA]
¢þ
>WENV182812736
OJXU01005264
[OJXU] human gut metagenome; human gut
216
302
+
Leu
CAG
[ENA]
¢þ
>WENV182812695
OJXU01000288
[OJXU] human gut metagenome; human gut
233
321
+
Leu
TAA
[ENA]
¢þ
>WENV182812710
OJXU01001352
[OJXU] human gut metagenome; human gut
254
329
+
Asp
GTC
[ENA]
¢þ
>WENV182812666
OJXU01000045
[OJXU] human gut metagenome; human gut
255
167
-
Ser
TGA
[ENA]
¢þ
>WENV182812725
OJXU01003069
[OJXU] human gut metagenome; human gut
259
184
-
Thr
CGT
[ENA]
¢þ
>WENV182812651
OJXU01000024
[OJXU] human gut metagenome; human gut
276
351
+
fMet
CAT
[ENA]
¢þ
>WENV182812732
OJXU01005251
[OJXU] human gut metagenome; human gut
292
219
-
Gly
TCC
[ENA]
¢þ
>WENV182812676
OJXU01000088
[OJXU] human gut metagenome; human gut
311
235
-
Met
CAT
[ENA]
¢þ
>WENV182812728
OJXU01003866
[OJXU] human gut metagenome; human gut
324
411
+
Ser
TGA
[ENA]
¢þ
>WENV182812707
OJXU01001015
[OJXU] human gut metagenome; human gut
343
270
-
Glu
CTC
[ENA]
¢þ
>WENV182812737
OJXU01005264
[OJXU] human gut metagenome; human gut
348
424
+
Pro
TGG
[ENA]
¢þ
>WENV182812720
OJXU01001765
[OJXU] human gut metagenome; human gut
351
276
-
Thr
GGT
[ENA]
¢þ
>WENV182812658
OJXU01000033
[OJXU] human gut metagenome; human gut
355
264
-
Ser
GGA
[ENA]
¢þ
>WENV182812711
OJXU01001352
[OJXU] human gut metagenome; human gut
360
435
+
Phe
GAA
[ENA]
¢þ
>WENV182812652
OJXU01000024
[OJXU] human gut metagenome; human gut
370
444
+
Phe
GAA
[ENA]
¢þ
>WENV182812731
OJXU01005251
[OJXU] human gut metagenome; human gut
373
299
-
Gly
GCC
[ENA]
¢þ
>WENV182812740
OJXU01006501
[OJXU] human gut metagenome; human gut
375
299
-
Ile
GAT
[ENA]
¢þ
>WENV182812743
OJXU01006821
[OJXU] human gut metagenome; human gut
381
452
+
Arg
CCT
[ENA]
¢þ
>WENV182812675
OJXU01000088
[OJXU] human gut metagenome; human gut
392
317
-
Thr
GGT
[ENA]
¢þ
>WENV182812727
OJXU01003583
[OJXU] human gut metagenome; human gut
396
472
+
Pro
GGG
[ENA]
¢þ
>WENV182812714
OJXU01001433
[OJXU] human gut metagenome; human gut
420
495
+
Phe
GAA
[ENA]
¢þ
>WENV182812684
OJXU01000118
[OJXU] human gut metagenome; human gut
425
350
-
Lys
TTT
[ENA]
¢þ
>WENV182812719
OJXU01001765
[OJXU] human gut metagenome; human gut
431
357
-
Gly
TCC
[ENA]
¢þ
>WENV182812712
OJXU01001352
[OJXU] human gut metagenome; human gut
437
520
+
Tyr
GTA
[ENA]
¢þ
>WENV182812730
OJXU01005251
[OJXU] human gut metagenome; human gut
460
377
-
Leu
TAG
[ENA]
¢þ
>WENV182812653
OJXU01000024
[OJXU] human gut metagenome; human gut
479
551
+
Lys
TTT
[ENA]
¢þ
>WENV182812674
OJXU01000088
[OJXU] human gut metagenome; human gut
499
424
-
fMet
CAT
[ENA]
¢þ
>WENV182812683
OJXU01000118
[OJXU] human gut metagenome; human gut
504
430
-
Gln
TTG
[ENA]
¢þ
>WENV182812713
OJXU01001352
[OJXU] human gut metagenome; human gut
521
594
+
Gln
TTG
[ENA]
¢þ
>WENV182812729
OJXU01005251
[OJXU] human gut metagenome; human gut
540
465
-
Lys
TTT
[ENA]
¢þ
>WENV182812726
OJXU01003555
[OJXU] human gut metagenome; human gut
563
635
+
Thr
CGT
[ENA]
¢þ
>WENV182812657
OJXU01000033
[OJXU] human gut metagenome; human gut
578
492
-
Ser
TGA
[ENA]
¢þ
>WENV182812673
OJXU01000088
[OJXU] human gut metagenome; human gut
589
505
-
Tyr
GTA
[ENA]
¢þ
>WENV182812715
OJXU01001700
[OJXU] human gut metagenome; human gut
601
677
+
Ile
GAT
[ENA]
¢þ
>WENV182812682
OJXU01000118
[OJXU] human gut metagenome; human gut
604
529
-
His
GTG
[ENA]
¢þ
>WENV182812721
OJXU01001864
[OJXU] human gut metagenome; human gut
623
719
+
SeC
TCA
[ENA]
¢þ
>WENV182812718
OJXU01001765
[OJXU] human gut metagenome; human gut
631
547
-
Tyr
GTA
[ENA]
¢þ
>WENV182812672
OJXU01000088
[OJXU] human gut metagenome; human gut
675
600
-
Thr
TGT
[ENA]
¢þ
>WENV182812716
OJXU01001700
[OJXU] human gut metagenome; human gut
688
763
+
Ala
TGC
[ENA]
¢þ
>WENV182812723
OJXU01002487
[OJXU] human gut metagenome; human gut
710
796
+
Leu
GAG
[ENA]
¢þ
>WENV182812717
OJXU01001765
[OJXU] human gut metagenome; human gut
717
642
-
Thr
TGT
[ENA]
¢þ
>WENV182812724
OJXU01002630
[OJXU] human gut metagenome; human gut
726
654
-
Glu
CTC
[ENA]
¢þ
>WENV182812722
OJXU01002118
[OJXU] human gut metagenome; human gut
794
721
-
Thr
GGT
[ENA]
¢þ
>WENV182812704
OJXU01000429
[OJXU] human gut metagenome; human gut
825
751
-
Ala
TGC
[ENA]
¢þ
>WENV182812691
OJXU01000185
[OJXU] human gut metagenome; human gut
862
937
+
Glu
TTC
[ENA]
¢þ
>WENV182812703
OJXU01000429
[OJXU] human gut metagenome; human gut
912
837
-
Pro
TGG
[ENA]
¢þ
>WENV182812702
OJXU01000429
[OJXU] human gut metagenome; human gut
1001
928
-
Arg
ACG
[ENA]
¢þ
>WENV182812701
OJXU01000429
[OJXU] human gut metagenome; human gut
1101
1016
-
Leu
TAA
[ENA]
¢þ
>WENV182812654
OJXU01000026
[OJXU] human gut metagenome; human gut
1118
1045
-
Gly
CCC
[ENA]
¢þ
>WENV182812700
OJXU01000429
[OJXU] human gut metagenome; human gut
1195
1124
-
Gly
GCC
[ENA]
¢þ
>WENV182812699
OJXU01000429
[OJXU] human gut metagenome; human gut
1273
1198
-
Thr
TGT
[ENA]
¢þ
>WENV182812705
OJXU01000699
[OJXU] human gut metagenome; human gut
1351
1426
+
Arg
TCT
[ENA]
¢þ
>WENV182812698
OJXU01000429
[OJXU] human gut metagenome; human gut
1373
1290
-
Leu
TAG
[ENA]
¢þ
>WENV182812697
OJXU01000429
[OJXU] human gut metagenome; human gut
1455
1381
-
Lys
TTT
[ENA]
¢þ
>WENV182812696
OJXU01000429
[OJXU] human gut metagenome; human gut
1531
1457
-
Val
TAC
[ENA]
¢þ
>WENV182812663
OJXU01000036
[OJXU] human gut metagenome; human gut
2529
2453
-
Arg
TCT
[ENA]
¢þ
>WENV182812662
OJXU01000036
[OJXU] human gut metagenome; human gut
2704
2631
-
Gly
TCC
[ENA]
¢þ
>WENV182812661
OJXU01000036
[OJXU] human gut metagenome; human gut
2791
2715
-
Pro
TGG
[ENA]
¢þ
>WENV182812692
OJXU01000223
[OJXU] human gut metagenome; human gut
3497
3572
+
Lys
CTT
[ENA]
¢þ
>WENV182812665
OJXU01000043
[OJXU] human gut metagenome; human gut
4054
4130
+
Arg
CCT
[ENA]
¢þ
>WENV182812690
OJXU01000174
[OJXU] human gut metagenome; human gut
4420
4348
-
Trp
CCA
[ENA]
¢þ
>WENV182812681
OJXU01000111
[OJXU] human gut metagenome; human gut
4977
5051
+
Ile2
CAT
[ENA]
¢þ
>WENV182812667
OJXU01000074
[OJXU] human gut metagenome; human gut
5430
5520
+
Ser
GGA
[ENA]
¢þ
>WENV182812689
OJXU01000148
[OJXU] human gut metagenome; human gut
7319
7406
+
Ser
GCT
[ENA]
¢þ
>WENV182812688
OJXU01000132
[OJXU] human gut metagenome; human gut
9469
9387
-
Leu
TAG
[ENA]
¢þ
>WENV182812687
OJXU01000132
[OJXU] human gut metagenome; human gut
9590
9518
-
Lys
TTT
[ENA]
¢þ
>WENV182812686
OJXU01000132
[OJXU] human gut metagenome; human gut
9696
9625
-
Gln
TTG
[ENA]
¢þ
>WENV182812685
OJXU01000132
[OJXU] human gut metagenome; human gut
9823
9749
-
His
GTG
[ENA]
¢þ
>WENV182812679
OJXU01000103
[OJXU] human gut metagenome; human gut
10439
10510
+
Glu
TTC
[ENA]
¢þ
>WENV182812680
OJXU01000103
[OJXU] human gut metagenome; human gut
10538
10610
+
Cys
GCA
[ENA]
¢þ
>WENV182812670
OJXU01000076
[OJXU] human gut metagenome; human gut
13504
13420
-
Leu
TAG
[ENA]
¢þ
>WENV182812656
OJXU01000032
[OJXU] human gut metagenome; human gut
13521
13450
-
Gln
CTG
[ENA]
¢þ
>WENV182812678
OJXU01000097
[OJXU] human gut metagenome; human gut
13822
13895
+
Lys
CTT
[ENA]
¢þ
>WENV182812677
OJXU01000093
[OJXU] human gut metagenome; human gut
15179
15089
-
Ser
GCT
[ENA]
¢þ
>WENV182812647
OJXU01000019
[OJXU] human gut metagenome; human gut
16243
16170
-
Arg
CCG
[ENA]
¢þ
>WENV182812655
OJXU01000028
[OJXU] human gut metagenome; human gut
19183
19099
-
Leu
CAG
[ENA]
¢þ
>WENV182812669
OJXU01000076
[OJXU] human gut metagenome; human gut
21820
21744
-
Arg
ACG
[ENA]
¢þ
>WENV182812671
OJXU01000079
[OJXU] human gut metagenome; human gut
21852
21764
-
Leu
TAA
[ENA]
¢þ
>WENV182812668
OJXU01000076
[OJXU] human gut metagenome; human gut
22008
21933
-
Trp
CCA
[ENA]
¢þ
>WENV182812660
OJXU01000036
[OJXU] human gut metagenome; human gut
23894
23984
+
Ser
CGA
[ENA]
¢þ
>WENV182812648
OJXU01000023
[OJXU] human gut metagenome; human gut
28358
28431
+
Arg
CCT
[ENA]
¢þ
>WENV182812664
OJXU01000042
[OJXU] human gut metagenome; human gut
32711
32785
+
Val
TAC
[ENA]
¢þ
>WENV182812659
OJXU01000035
[OJXU] human gut metagenome; human gut
39184
39258
+
Arg
CCG
[ENA]
¢þ
>WENV182812645
OJXU01000008
[OJXU] human gut metagenome; human gut
50147
50073
-
Arg
ACG
[ENA]
¢þ
>WENV182812640
OJXU01000007
[OJXU] human gut metagenome; human gut
53923
54007
+
Leu
AAG
[ENA]
¢þ
>WENV182812642
OJXU01000007
[OJXU] human gut metagenome; human gut
55002
54918
-
Leu
AAG
[ENA]
¢þ
>WENV182812643
OJXU01000008
[OJXU] human gut metagenome; human gut
56294
56364
+
Gln
CTG
[ENA]
¢þ
>WENV182812644
OJXU01000008
[OJXU] human gut metagenome; human gut
56394
56469
+
Pro
CGG
[ENA]
¢þ
>WENV182812633
OJXU01000002
[OJXU] human gut metagenome; human gut
57964
58036
+
Thr
CGT
[ENA]
¢þ
>WENV182812646
OJXU01000018
[OJXU] human gut metagenome; human gut
59172
59255
+
Leu
CAA
[ENA]
¢þ
>WENV182812638
OJXU01000004
[OJXU] human gut metagenome; human gut
73186
73112
-
Pro
GGG
[ENA]
¢þ
>WENV182812639
OJXU01000006
[OJXU] human gut metagenome; human gut
74948
74866
-
Leu
CAA
[ENA]
¢þ
>WENV182812641
OJXU01000007
[OJXU] human gut metagenome; human gut
91801
91727
-
Thr
GGT
[ENA]
¢þ
>WENV182812634
OJXU01000002
[OJXU] human gut metagenome; human gut
93260
93333
+
Gly
GCC
[ENA]
¢þ
>WENV182812637
OJXU01000004
[OJXU] human gut metagenome; human gut
95621
95547
-
Asn
GTT
[ENA]
¢þ
>WENV182812636
OJXU01000003
[OJXU] human gut metagenome; human gut
105238
105168
-
Gly
TCC
[ENA]
¢þ
>WENV182812635
OJXU01000003
[OJXU] human gut metagenome; human gut
105317
105242
-
Pro
TGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK