This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJYS] human gut metagenome; human gut
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182815610
OJYS01001588
[OJYS] human gut metagenome; human gut
7
80
+
Ile2
CAT
[ENA]
¢þ
>WENV182815621
OJYS01003746
[OJYS] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182815617
OJYS01002349
[OJYS] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182815598
OJYS01001003
[OJYS] human gut metagenome; human gut
60
133
+
Gln
TTG
[ENA]
¢þ
>WENV182815620
OJYS01003277
[OJYS] human gut metagenome; human gut
76
2
-
Val
TAC
[ENA]
¢þ
>WENV182815613
OJYS01002045
[OJYS] human gut metagenome; human gut
79
152
+
Gly
CCC
[ENA]
¢þ
>WENV182815619
OJYS01003192
[OJYS] human gut metagenome; human gut
128
200
+
Ala
TGC
[ENA]
¢þ
>WENV182815622
OJYS01003746
[OJYS] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182815618
OJYS01003168
[OJYS] human gut metagenome; human gut
165
89
-
Pro
GGG
[ENA]
¢þ
>WENV182815592
OJYS01000588
[OJYS] human gut metagenome; human gut
209
285
+
Arg
ACG
[ENA]
¢þ
>WENV182815627
OJYS01004041
[OJYS] human gut metagenome; human gut
230
155
-
Thr
CGT
[ENA]
¢þ
>WENV182815623
OJYS01003746
[OJYS] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182815612
OJYS01001927
[OJYS] human gut metagenome; human gut
255
180
-
Phe
GAA
[ENA]
¢þ
>WENV182815609
OJYS01001424
[OJYS] human gut metagenome; human gut
258
183
-
Arg
TCT
[ENA]
¢þ
>WENV182815596
OJYS01000814
[OJYS] human gut metagenome; human gut
260
174
-
Lys
TTT
[ENA]
¢þ
>WENV182815606
OJYS01001164
[OJYS] human gut metagenome; human gut
269
193
-
Val
GAC
[ENA]
¢þ
>WENV182815607
OJYS01001191
[OJYS] human gut metagenome; human gut
285
360
+
Ile2
CAT
[ENA]
¢þ
>WENV182815624
OJYS01003746
[OJYS] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182815628
OJYS01004286
[OJYS] human gut metagenome; human gut
345
271
-
Val
CAC
[ENA]
¢þ
>WENV182815590
OJYS01000505
[OJYS] human gut metagenome; human gut
387
311
-
Pro
GGG
[ENA]
¢þ
>WENV182815625
OJYS01003746
[OJYS] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182815615
OJYS01002221
[OJYS] human gut metagenome; human gut
415
340
-
Lys
TTT
[ENA]
¢þ
>WENV182815626
OJYS01003746
[OJYS] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182815616
OJYS01002258
[OJYS] human gut metagenome; human gut
567
642
+
Asn
GTT
[ENA]
¢þ
>WENV182815605
OJYS01001135
[OJYS] human gut metagenome; human gut
616
689
+
Ile2
CAT
[ENA]
¢þ
>WENV182815608
OJYS01001336
[OJYS] human gut metagenome; human gut
688
601
-
Ser
GGA
[ENA]
¢þ
>WENV182815614
OJYS01002089
[OJYS] human gut metagenome; human gut
778
691
-
Ser
TGA
[ENA]
¢þ
>WENV182815611
OJYS01001591
[OJYS] human gut metagenome; human gut
812
906
+
SeC
TCA
[ENA]
¢þ
>WENV182815584
OJYS01000334
[OJYS] human gut metagenome; human gut
861
936
+
Glu
TTC
[ENA]
¢þ
>WENV182815603
OJYS01001060
[OJYS] human gut metagenome; human gut
876
791
-
Leu
CAA
[ENA]
¢þ
>WENV182815602
OJYS01001060
[OJYS] human gut metagenome; human gut
959
889
-
Cys
GCA
[ENA]
¢þ
>WENV182815601
OJYS01001060
[OJYS] human gut metagenome; human gut
1057
984
-
Gln
TTG
[ENA]
¢þ
>WENV182815604
OJYS01001073
[OJYS] human gut metagenome; human gut
1095
1023
-
Arg
CCT
[ENA]
¢þ
>WENV182815600
OJYS01001060
[OJYS] human gut metagenome; human gut
1143
1070
-
His
GTG
[ENA]
¢þ
>WENV182815597
OJYS01000917
[OJYS] human gut metagenome; human gut
1162
1078
-
Leu
CAA
[ENA]
¢þ
>WENV182815595
OJYS01000799
[OJYS] human gut metagenome; human gut
1165
1089
-
Asp
GTC
[ENA]
¢þ
>WENV182815599
OJYS01001060
[OJYS] human gut metagenome; human gut
1253
1180
-
Trp
CCA
[ENA]
¢þ
>WENV182815594
OJYS01000640
[OJYS] human gut metagenome; human gut
1305
1391
+
Leu
CAG
[ENA]
¢þ
>WENV182815580
OJYS01000055
[OJYS] human gut metagenome; human gut
1646
1560
-
Leu
GAG
[ENA]
¢þ
>WENV182815593
OJYS01000626
[OJYS] human gut metagenome; human gut
1682
1610
-
Thr
GGT
[ENA]
¢þ
>WENV182815589
OJYS01000456
[OJYS] human gut metagenome; human gut
1772
1697
-
Thr
GGT
[ENA]
¢þ
>WENV182815588
OJYS01000456
[OJYS] human gut metagenome; human gut
1853
1779
-
Gly
TCC
[ENA]
¢þ
>WENV182815591
OJYS01000513
[OJYS] human gut metagenome; human gut
2047
1971
-
fMet
CAT
[ENA]
¢þ
>WENV182815587
OJYS01000456
[OJYS] human gut metagenome; human gut
2054
1970
-
Tyr
GTA
[ENA]
¢þ
>WENV182815586
OJYS01000456
[OJYS] human gut metagenome; human gut
2138
2063
-
Thr
TGT
[ENA]
¢þ
>WENV182815585
OJYS01000419
[OJYS] human gut metagenome; human gut
2417
2344
-
Pro
TGG
[ENA]
¢þ
>WENV182815583
OJYS01000109
[OJYS] human gut metagenome; human gut
3018
2945
-
Arg
CCG
[ENA]
¢þ
>WENV182815581
OJYS01000094
[OJYS] human gut metagenome; human gut
4659
4732
+
Arg
TCT
[ENA]
¢þ
>WENV182815582
OJYS01000098
[OJYS] human gut metagenome; human gut
5780
5852
+
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK