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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OJYZ] human gut metagenome; human gut
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182816285
OJYZ01001754
[OJYZ] human gut metagenome; human gut
190
115
-
Ala
TGC
[ENA]
¢þ
>WENV182816265
OJYZ01000154
[OJYZ] human gut metagenome; human gut
195
119
-
Arg
ACG
[ENA]
¢þ
>WENV182816290
OJYZ01004144
[OJYZ] human gut metagenome; human gut
280
354
+
Asn
GTT
[ENA]
¢þ
>WENV182816264
OJYZ01000154
[OJYZ] human gut metagenome; human gut
292
200
-
Ser
GCT
[ENA]
¢þ
>WENV182816288
OJYZ01002875
[OJYZ] human gut metagenome; human gut
346
430
+
Leu
CAA
[ENA]
¢þ
>WENV182816292
OJYZ01004711
[OJYZ] human gut metagenome; human gut
351
437
+
Leu
GAG
[ENA]
¢þ
>WENV182816291
OJYZ01004144
[OJYZ] human gut metagenome; human gut
360
436
+
Arg
TCT
[ENA]
¢þ
>WENV182816284
OJYZ01001754
[OJYZ] human gut metagenome; human gut
372
296
-
Ile
GAT
[ENA]
¢þ
>WENV182816286
OJYZ01002594
[OJYZ] human gut metagenome; human gut
382
295
-
Ser
GGA
[ENA]
¢þ
>WENV182816281
OJYZ01001119
[OJYZ] human gut metagenome; human gut
455
382
-
Gly
CCC
[ENA]
¢þ
>WENV182816289
OJYZ01003325
[OJYZ] human gut metagenome; human gut
460
373
-
Ser
TGA
[ENA]
¢þ
>WENV182816287
OJYZ01002819
[OJYZ] human gut metagenome; human gut
492
586
+
SeC
TCA
[ENA]
¢þ
>WENV182816279
OJYZ01000919
[OJYZ] human gut metagenome; human gut
501
576
+
Thr
CGT
[ENA]
¢þ
>WENV182816280
OJYZ01001117
[OJYZ] human gut metagenome; human gut
513
437
-
Pro
GGG
[ENA]
¢þ
>WENV182816282
OJYZ01001189
[OJYZ] human gut metagenome; human gut
576
504
-
Arg
CCT
[ENA]
¢þ
>WENV182816278
OJYZ01000890
[OJYZ] human gut metagenome; human gut
602
516
-
Leu
TAA
[ENA]
¢þ
>WENV182816274
OJYZ01000609
[OJYZ] human gut metagenome; human gut
611
687
+
Arg
TCT
[ENA]
¢þ
>WENV182816277
OJYZ01000890
[OJYZ] human gut metagenome; human gut
687
614
-
Cys
GCA
[ENA]
¢þ
>WENV182816276
OJYZ01000890
[OJYZ] human gut metagenome; human gut
814
739
-
Gly
GCC
[ENA]
¢þ
>WENV182816283
OJYZ01001646
[OJYZ] human gut metagenome; human gut
895
970
+
Phe
GAA
[ENA]
¢þ
>WENV182816273
OJYZ01000454
[OJYZ] human gut metagenome; human gut
989
914
-
Trp
CCA
[ENA]
¢þ
>WENV182816272
OJYZ01000454
[OJYZ] human gut metagenome; human gut
1119
1043
-
Asp
GTC
[ENA]
¢þ
>WENV182816268
OJYZ01000373
[OJYZ] human gut metagenome; human gut
1333
1408
+
Val
TAC
[ENA]
¢þ
>WENV182816269
OJYZ01000373
[OJYZ] human gut metagenome; human gut
1413
1488
+
Lys
TTT
[ENA]
¢þ
>WENV182816271
OJYZ01000451
[OJYZ] human gut metagenome; human gut
1594
1510
-
Tyr
GTA
[ENA]
¢þ
>WENV182816270
OJYZ01000397
[OJYZ] human gut metagenome; human gut
1960
2035
+
Arg
TCT
[ENA]
¢þ
>WENV182816275
OJYZ01000628
[OJYZ] human gut metagenome; human gut
1979
2055
+
Pro
TGG
[ENA]
¢þ
>WENV182816267
OJYZ01000346
[OJYZ] human gut metagenome; human gut
2226
2151
-
Ile2
CAT
[ENA]
¢þ
>WENV182816262
OJYZ01000090
[OJYZ] human gut metagenome; human gut
3706
3782
+
fMet
CAT
[ENA]
¢þ
>WENV182816266
OJYZ01000157
[OJYZ] human gut metagenome; human gut
3793
3869
+
Arg
CCG
[ENA]
¢þ
>WENV182816263
OJYZ01000090
[OJYZ] human gut metagenome; human gut
3827
3903
+
fMet
CAT
[ENA]
¢þ
>WENV182816259
OJYZ01000087
[OJYZ] human gut metagenome; human gut
4388
4464
+
Met
CAT
[ENA]
¢þ
>WENV182816260
OJYZ01000087
[OJYZ] human gut metagenome; human gut
4473
4557
+
Leu
TAG
[ENA]
¢þ
>WENV182816261
OJYZ01000087
[OJYZ] human gut metagenome; human gut
4581
4655
+
Gln
TTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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