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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJZP] human gut metagenome; human gut
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182818202
OJZP01000445
[OJZP] human gut metagenome; human gut
4
79
+
Val
TAC
[ENA]
¢þ
>WENV182818233
OJZP01001577
[OJZP] human gut metagenome; human gut
59
133
+
Gln
CTG
[ENA]
¢þ
>WENV182818207
OJZP01000643
[OJZP] human gut metagenome; human gut
76
152
+
Val
GAC
[ENA]
¢þ
>WENV182818203
OJZP01000445
[OJZP] human gut metagenome; human gut
87
162
+
Lys
TTT
[ENA]
¢þ
>WENV182818238
OJZP01002195
[OJZP] human gut metagenome; human gut
103
27
-
Pro
CGG
[ENA]
¢þ
>WENV182818169
OJZP01000061
[OJZP] human gut metagenome; human gut
108
33
-
Phe
GAA
[ENA]
¢þ
>WENV182818231
OJZP01001563
[OJZP] human gut metagenome; human gut
119
195
+
Ile
GAT
[ENA]
¢þ
>WENV182818225
OJZP01001141
[OJZP] human gut metagenome; human gut
138
53
-
Leu
TAA
[ENA]
¢þ
>WENV182818235
OJZP01001695
[OJZP] human gut metagenome; human gut
166
91
-
Val
TAC
[ENA]
¢þ
>WENV182818206
OJZP01000572
[OJZP] human gut metagenome; human gut
177
91
-
Leu
CAG
[ENA]
¢þ
>WENV182818224
OJZP01001141
[OJZP] human gut metagenome; human gut
222
149
-
Cys
GCA
[ENA]
¢þ
>WENV182818232
OJZP01001563
[OJZP] human gut metagenome; human gut
234
309
+
Ala
TGC
[ENA]
¢þ
>WENV182818240
OJZP01002254
[OJZP] human gut metagenome; human gut
254
328
+
Gly
TCC
[ENA]
¢þ
>WENV182818227
OJZP01001339
[OJZP] human gut metagenome; human gut
270
181
-
Ser
GGA
[ENA]
¢þ
>WENV182818234
OJZP01001695
[OJZP] human gut metagenome; human gut
270
195
-
Val
TAC
[ENA]
¢þ
>WENV182818178
OJZP01000187
[OJZP] human gut metagenome; human gut
290
214
-
Pro
TGG
[ENA]
¢þ
>WENV182818241
OJZP01002254
[OJZP] human gut metagenome; human gut
335
410
+
Thr
GGT
[ENA]
¢þ
>WENV182818189
OJZP01000262
[OJZP] human gut metagenome; human gut
467
378
-
Ser
GGA
[ENA]
¢þ
>WENV182818239
OJZP01002252
[OJZP] human gut metagenome; human gut
488
563
+
Lys
TTT
[ENA]
¢þ
>WENV182818237
OJZP01002079
[OJZP] human gut metagenome; human gut
774
866
+
Ser
GCT
[ENA]
¢þ
>WENV182818217
OJZP01000867
[OJZP] human gut metagenome; human gut
936
860
-
Arg
TCT
[ENA]
¢þ
>WENV182818223
OJZP01001141
[OJZP] human gut metagenome; human gut
972
897
-
Gly
GCC
[ENA]
¢þ
>WENV182818211
OJZP01000719
[OJZP] human gut metagenome; human gut
1036
1111
+
Ala
GGC
[ENA]
¢þ
>WENV182818212
OJZP01000719
[OJZP] human gut metagenome; human gut
1172
1247
+
Ala
GGC
[ENA]
¢þ
>WENV182818176
OJZP01000165
[OJZP] human gut metagenome; human gut
1198
1274
+
Asp
GTC
[ENA]
¢þ
>WENV182818219
OJZP01001095
[OJZP] human gut metagenome; human gut
1296
1372
+
Ile
GAT
[ENA]
¢þ
>WENV182818195
OJZP01000329
[OJZP] human gut metagenome; human gut
1344
1250
-
SeC
TCA
[ENA]
¢þ
>WENV182818236
OJZP01001740
[OJZP] human gut metagenome; human gut
1369
1453
+
Tyr
GTA
[ENA]
¢þ
>WENV182818193
OJZP01000281
[OJZP] human gut metagenome; human gut
1374
1299
-
Lys
TTT
[ENA]
¢þ
>WENV182818220
OJZP01001095
[OJZP] human gut metagenome; human gut
1401
1476
+
Ala
TGC
[ENA]
¢þ
>WENV182818192
OJZP01000281
[OJZP] human gut metagenome; human gut
1461
1385
-
Pro
TGG
[ENA]
¢þ
>WENV182818191
OJZP01000281
[OJZP] human gut metagenome; human gut
1546
1471
-
Asn
GTT
[ENA]
¢þ
>WENV182818208
OJZP01000663
[OJZP] human gut metagenome; human gut
1705
1795
+
Ser
GCT
[ENA]
¢þ
>WENV182818172
OJZP01000087
[OJZP] human gut metagenome; human gut
1748
1662
-
Leu
CAG
[ENA]
¢þ
>WENV182818209
OJZP01000663
[OJZP] human gut metagenome; human gut
1913
1989
+
Arg
ACG
[ENA]
¢þ
>WENV182818171
OJZP01000087
[OJZP] human gut metagenome; human gut
1964
1878
-
Leu
CAG
[ENA]
¢þ
>WENV182818222
OJZP01001135
[OJZP] human gut metagenome; human gut
1979
1905
-
Arg
CCT
[ENA]
¢þ
>WENV182818218
OJZP01001020
[OJZP] human gut metagenome; human gut
2074
1987
-
Ser
TGA
[ENA]
¢þ
>WENV182818228
OJZP01001344
[OJZP] human gut metagenome; human gut
2117
2193
+
Met
CAT
[ENA]
¢þ
>WENV182818215
OJZP01000782
[OJZP] human gut metagenome; human gut
2185
2274
+
Ser
TGA
[ENA]
¢þ
>WENV182818229
OJZP01001344
[OJZP] human gut metagenome; human gut
2210
2294
+
Leu
TAG
[ENA]
¢þ
>WENV182818221
OJZP01001105
[OJZP] human gut metagenome; human gut
2317
2228
-
Ser
CGA
[ENA]
¢þ
>WENV182818230
OJZP01001344
[OJZP] human gut metagenome; human gut
2325
2399
+
Gln
TTG
[ENA]
¢þ
>WENV182818198
OJZP01000339
[OJZP] human gut metagenome; human gut
2342
2266
-
Met
CAT
[ENA]
¢þ
>WENV182818226
OJZP01001303
[OJZP] human gut metagenome; human gut
2525
2601
+
Val
GAC
[ENA]
¢þ
>WENV182818210
OJZP01000708
[OJZP] human gut metagenome; human gut
2806
2720
-
Leu
CAA
[ENA]
¢þ
>WENV182818185
OJZP01000227
[OJZP] human gut metagenome; human gut
3366
3293
-
Gly
CCC
[ENA]
¢þ
>WENV182818213
OJZP01000726
[OJZP] human gut metagenome; human gut
3854
3930
+
Arg
CCT
[ENA]
¢þ
>WENV182818184
OJZP01000219
[OJZP] human gut metagenome; human gut
3882
3806
-
Asp
GTC
[ENA]
¢þ
>WENV182818175
OJZP01000155
[OJZP] human gut metagenome; human gut
3901
3826
-
Asn
GTT
[ENA]
¢þ
>WENV182818214
OJZP01000773
[OJZP] human gut metagenome; human gut
3971
3896
-
Asn
GTT
[ENA]
¢þ
>WENV182818183
OJZP01000219
[OJZP] human gut metagenome; human gut
3974
3899
-
Val
TAC
[ENA]
¢þ
>WENV182818216
OJZP01000848
[OJZP] human gut metagenome; human gut
4449
4524
+
Lys
TTT
[ENA]
¢þ
>WENV182818180
OJZP01000196
[OJZP] human gut metagenome; human gut
4476
4400
-
fMet
CAT
[ENA]
¢þ
>WENV182818179
OJZP01000196
[OJZP] human gut metagenome; human gut
4617
4541
-
fMet
CAT
[ENA]
¢þ
>WENV182818199
OJZP01000359
[OJZP] human gut metagenome; human gut
4621
4526
-
SeC
TCA
[ENA]
¢þ
>WENV182818200
OJZP01000395
[OJZP] human gut metagenome; human gut
4871
4955
+
Leu
CAA
[ENA]
¢þ
>WENV182818190
OJZP01000275
[OJZP] human gut metagenome; human gut
5789
5865
+
Pro
GGG
[ENA]
¢þ
>WENV182818186
OJZP01000238
[OJZP] human gut metagenome; human gut
5842
5918
+
Pro
GGG
[ENA]
¢þ
>WENV182818197
OJZP01000339
[OJZP] human gut metagenome; human gut
6090
6016
-
Gln
TTG
[ENA]
¢þ
>WENV182818177
OJZP01000174
[OJZP] human gut metagenome; human gut
6183
6107
-
Arg
CCG
[ENA]
¢þ
>WENV182818165
OJZP01000026
[OJZP] human gut metagenome; human gut
6463
6387
-
fMet
CAT
[ENA]
¢þ
>WENV182818204
OJZP01000522
[OJZP] human gut metagenome; human gut
6554
6630
+
Arg
CCG
[ENA]
¢þ
>WENV182818164
OJZP01000026
[OJZP] human gut metagenome; human gut
6610
6524
-
Leu
GAG
[ENA]
¢þ
>WENV182818205
OJZP01000522
[OJZP] human gut metagenome; human gut
6690
6765
+
His
GTG
[ENA]
¢þ
>WENV182818194
OJZP01000324
[OJZP] human gut metagenome; human gut
7148
7221
+
Gly
CCC
[ENA]
¢þ
>WENV182818182
OJZP01000214
[OJZP] human gut metagenome; human gut
7421
7337
-
Tyr
GTA
[ENA]
¢þ
>WENV182818181
OJZP01000214
[OJZP] human gut metagenome; human gut
7522
7447
-
Thr
TGT
[ENA]
¢þ
>WENV182818201
OJZP01000398
[OJZP] human gut metagenome; human gut
7855
7782
-
Cys
GCA
[ENA]
¢þ
>WENV182818157
OJZP01000007
[OJZP] human gut metagenome; human gut
8271
8182
-
Ser
CGA
[ENA]
¢þ
>WENV182818196
OJZP01000333
[OJZP] human gut metagenome; human gut
8271
8346
+
Thr
CGT
[ENA]
¢þ
>WENV182818158
OJZP01000011
[OJZP] human gut metagenome; human gut
8935
9020
+
Leu
GAG
[ENA]
¢þ
>WENV182818163
OJZP01000021
[OJZP] human gut metagenome; human gut
9077
9002
-
Thr
TGT
[ENA]
¢þ
>WENV182818159
OJZP01000011
[OJZP] human gut metagenome; human gut
9111
9187
+
fMet
CAT
[ENA]
¢þ
>WENV182818188
OJZP01000249
[OJZP] human gut metagenome; human gut
10551
10476
-
Trp
CCA
[ENA]
¢þ
>WENV182818187
OJZP01000249
[OJZP] human gut metagenome; human gut
10679
10603
-
Asp
GTC
[ENA]
¢þ
>WENV182818170
OJZP01000076
[OJZP] human gut metagenome; human gut
12268
12182
-
Leu
TAA
[ENA]
¢þ
>WENV182818173
OJZP01000155
[OJZP] human gut metagenome; human gut
12700
12775
+
Ala
GGC
[ENA]
¢þ
>WENV182818174
OJZP01000155
[OJZP] human gut metagenome; human gut
12824
12899
+
Glu
TTC
[ENA]
¢þ
>WENV182818167
OJZP01000049
[OJZP] human gut metagenome; human gut
16696
16772
+
Arg
TCT
[ENA]
¢þ
>WENV182818168
OJZP01000049
[OJZP] human gut metagenome; human gut
16824
16899
+
His
GTG
[ENA]
¢þ
>WENV182818166
OJZP01000027
[OJZP] human gut metagenome; human gut
16923
16848
-
Thr
CGT
[ENA]
¢þ
>WENV182818162
OJZP01000021
[OJZP] human gut metagenome; human gut
20487
20412
-
Phe
GAA
[ENA]
¢þ
>WENV182818160
OJZP01000012
[OJZP] human gut metagenome; human gut
21587
21512
-
Ile2
CAT
[ENA]
¢þ
>WENV182818161
OJZP01000016
[OJZP] human gut metagenome; human gut
29706
29782
+
fMet
CAT
[ENA]
¢þ
>WENV182818156
OJZP01000006
[OJZP] human gut metagenome; human gut
37544
37469
-
Trp
CCA
[ENA]
¢þ
>WENV182818155
OJZP01000006
[OJZP] human gut metagenome; human gut
38953
38878
-
Thr
GGT
[ENA]
¢þ
>WENV182818154
OJZP01000006
[OJZP] human gut metagenome; human gut
39046
38973
-
Gly
TCC
[ENA]
¢þ
>WENV182818153
OJZP01000006
[OJZP] human gut metagenome; human gut
39157
39073
-
Tyr
GTA
[ENA]
¢þ
>WENV182818152
OJZP01000001
[OJZP] human gut metagenome; human gut
48102
48178
+
Ile2
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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