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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OKAU] human gut metagenome; human gut
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182821257
OKAU01000160
[OKAU] human gut metagenome; human gut
64
147
+
Tyr
GTA
[ENA]
¢þ
>WENV182821261
OKAU01000505
[OKAU] human gut metagenome; human gut
71
161
+
Ser
GGA
[ENA]
¢þ
>WENV182821256
OKAU01000142
[OKAU] human gut metagenome; human gut
142
69
-
fMet
CAT
[ENA]
¢þ
>WENV182821258
OKAU01000160
[OKAU] human gut metagenome; human gut
154
228
+
Gln
TTG
[ENA]
¢þ
>WENV182821260
OKAU01000243
[OKAU] human gut metagenome; human gut
162
77
-
Leu
GAG
[ENA]
¢þ
>WENV182821259
OKAU01000160
[OKAU] human gut metagenome; human gut
232
305
+
Lys
TTT
[ENA]
¢þ
>WENV182821263
OKAU01000856
[OKAU] human gut metagenome; human gut
450
361
-
Ser
GGA
[ENA]
¢þ
>WENV182821251
OKAU01000003
[OKAU] human gut metagenome; human gut
600
672
+
Arg
CCG
[ENA]
¢þ
>WENV182821262
OKAU01000732
[OKAU] human gut metagenome; human gut
714
638
-
Ile
GAT
[ENA]
¢þ
>WENV182821250
OKAU01000001
[OKAU] human gut metagenome; human gut
7974
7902
-
Asp
GTC
[ENA]
¢þ
>WENV182821249
OKAU01000001
[OKAU] human gut metagenome; human gut
8055
7981
-
Glu
TTC
[ENA]
¢þ
>WENV182821253
OKAU01000015
[OKAU] human gut metagenome; human gut
8854
8762
-
Ser
TGA
[ENA]
¢þ
>WENV182821255
OKAU01000072
[OKAU] human gut metagenome; human gut
13543
13472
-
Arg
CCG
[ENA]
¢þ
>WENV182821254
OKAU01000016
[OKAU] human gut metagenome; human gut
15105
15179
+
Arg
TCT
[ENA]
¢þ
>WENV182821252
OKAU01000004
[OKAU] human gut metagenome; human gut
47683
47609
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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