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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKAY] human gut metagenome; human gut
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182821560
OKAY01000019
[OKAY] human gut metagenome; human gut
23
97
+
Arg
ACG
[ENA]
¢þ
>WENV182821597
OKAY01004059
[OKAY] human gut metagenome; human gut
38
122
+
Leu
TAA
[ENA]
¢þ
>WENV182821592
OKAY01003194
[OKAY] human gut metagenome; human gut
88
15
-
Trp
CCA
[ENA]
¢þ
>WENV182821561
OKAY01000019
[OKAY] human gut metagenome; human gut
102
175
+
Phe
GAA
[ENA]
¢þ
>WENV182821584
OKAY01001479
[OKAY] human gut metagenome; human gut
113
42
-
Gln
TTG
[ENA]
¢þ
>WENV182821580
OKAY01000924
[OKAY] human gut metagenome; human gut
175
89
-
Leu
CAG
[ENA]
¢þ
>WENV182821562
OKAY01000019
[OKAY] human gut metagenome; human gut
185
259
+
His
GTG
[ENA]
¢þ
>WENV182821583
OKAY01001212
[OKAY] human gut metagenome; human gut
190
103
-
Ser
GGA
[ENA]
¢þ
>WENV182821602
OKAY01004534
[OKAY] human gut metagenome; human gut
191
119
-
Glu
CTC
[ENA]
¢þ
>WENV182821599
OKAY01004206
[OKAY] human gut metagenome; human gut
221
148
-
Phe
GAA
[ENA]
¢þ
>WENV182821591
OKAY01002892
[OKAY] human gut metagenome; human gut
223
298
+
Ile2
CAT
[ENA]
¢þ
>WENV182821579
OKAY01000924
[OKAY] human gut metagenome; human gut
271
196
-
His
GTG
[ENA]
¢þ
>WENV182821601
OKAY01004534
[OKAY] human gut metagenome; human gut
279
206
-
Lys
CTT
[ENA]
¢þ
>WENV182821588
OKAY01001824
[OKAY] human gut metagenome; human gut
312
397
+
Ser
TGA
[ENA]
¢þ
>WENV182821590
OKAY01002573
[OKAY] human gut metagenome; human gut
326
250
-
Val
TAC
[ENA]
¢þ
>WENV182821593
OKAY01003564
[OKAY] human gut metagenome; human gut
335
408
+
Gly
GCC
[ENA]
¢þ
>WENV182821598
OKAY01004206
[OKAY] human gut metagenome; human gut
348
421
+
Pro
CGG
[ENA]
¢þ
>WENV182821578
OKAY01000924
[OKAY] human gut metagenome; human gut
406
330
-
Arg
CCG
[ENA]
¢þ
>WENV182821600
OKAY01004372
[OKAY] human gut metagenome; human gut
406
480
+
Thr
TGT
[ENA]
¢þ
>WENV182821596
OKAY01003927
[OKAY] human gut metagenome; human gut
414
340
-
Asp
GTC
[ENA]
¢þ
>WENV182821594
OKAY01003564
[OKAY] human gut metagenome; human gut
455
536
+
Leu
CAG
[ENA]
¢þ
>WENV182821595
OKAY01003564
[OKAY] human gut metagenome; human gut
559
643
+
Pro
GGG
[ENA]
¢þ
>WENV182821589
OKAY01002148
[OKAY] human gut metagenome; human gut
597
670
+
Gly
CCC
[ENA]
¢þ
>WENV182821586
OKAY01001581
[OKAY] human gut metagenome; human gut
685
761
+
Asp
GTC
[ENA]
¢þ
>WENV182821582
OKAY01000966
[OKAY] human gut metagenome; human gut
697
621
-
Pro
CGG
[ENA]
¢þ
>WENV182821587
OKAY01001581
[OKAY] human gut metagenome; human gut
770
845
+
Trp
CCA
[ENA]
¢þ
>WENV182821577
OKAY01000868
[OKAY] human gut metagenome; human gut
804
729
-
Gly
GCC
[ENA]
¢þ
>WENV182821585
OKAY01001499
[OKAY] human gut metagenome; human gut
831
906
+
Asn
GTT
[ENA]
¢þ
>WENV182821581
OKAY01000931
[OKAY] human gut metagenome; human gut
839
915
+
Pro
GGG
[ENA]
¢þ
>WENV182821568
OKAY01000178
[OKAY] human gut metagenome; human gut
878
802
-
Arg
ACG
[ENA]
¢þ
>WENV182821576
OKAY01000535
[OKAY] human gut metagenome; human gut
890
966
+
fMet
CAT
[ENA]
¢þ
>WENV182821567
OKAY01000178
[OKAY] human gut metagenome; human gut
974
882
-
Ser
GCT
[ENA]
¢þ
>WENV182821573
OKAY01000500
[OKAY] human gut metagenome; human gut
1001
1076
+
Val
TAC
[ENA]
¢þ
>WENV182821572
OKAY01000440
[OKAY] human gut metagenome; human gut
1021
1096
+
Phe
GAA
[ENA]
¢þ
>WENV182821569
OKAY01000208
[OKAY] human gut metagenome; human gut
1080
1155
+
Ala
GGC
[ENA]
¢þ
>WENV182821574
OKAY01000500
[OKAY] human gut metagenome; human gut
1081
1156
+
Lys
TTT
[ENA]
¢þ
>WENV182821575
OKAY01000521
[OKAY] human gut metagenome; human gut
1411
1495
+
Tyr
GTA
[ENA]
¢þ
>WENV182821570
OKAY01000418
[OKAY] human gut metagenome; human gut
1502
1578
+
Val
GAC
[ENA]
¢þ
>WENV182821571
OKAY01000418
[OKAY] human gut metagenome; human gut
1583
1659
+
Val
GAC
[ENA]
¢þ
>WENV182821564
OKAY01000024
[OKAY] human gut metagenome; human gut
2171
2097
-
Ala
TGC
[ENA]
¢þ
>WENV182821557
OKAY01000010
[OKAY] human gut metagenome; human gut
2223
2299
+
Ile
GAT
[ENA]
¢þ
>WENV182821563
OKAY01000024
[OKAY] human gut metagenome; human gut
2262
2188
-
Ile
GAT
[ENA]
¢þ
>WENV182821558
OKAY01000010
[OKAY] human gut metagenome; human gut
2342
2417
+
Ala
TGC
[ENA]
¢þ
>WENV182821566
OKAY01000044
[OKAY] human gut metagenome; human gut
3325
3251
-
Gln
CTG
[ENA]
¢þ
>WENV182821565
OKAY01000044
[OKAY] human gut metagenome; human gut
3450
3374
-
Met
CAT
[ENA]
¢þ
>WENV182821559
OKAY01000010
[OKAY] human gut metagenome; human gut
5729
5804
+
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK