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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OKBJ] human gut metagenome; human gut
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182822492
OKBJ01001918
[OKBJ] human gut metagenome; human gut
59
134
+
Trp
CCA
[ENA]
¢þ
>WENV182822495
OKBJ01002623
[OKBJ] human gut metagenome; human gut
215
291
+
Arg
TCT
[ENA]
¢þ
>WENV182822498
OKBJ01003091
[OKBJ] human gut metagenome; human gut
278
351
+
Gly
GCC
[ENA]
¢þ
>WENV182822488
OKBJ01001348
[OKBJ] human gut metagenome; human gut
323
248
-
Thr
GGT
[ENA]
¢þ
>WENV182822491
OKBJ01001798
[OKBJ] human gut metagenome; human gut
342
417
+
Phe
GAA
[ENA]
¢þ
>WENV182822477
OKBJ01000210
[OKBJ] human gut metagenome; human gut
346
421
+
Ile2
CAT
[ENA]
¢þ
>WENV182822493
OKBJ01002103
[OKBJ] human gut metagenome; human gut
359
434
+
Asn
GTT
[ENA]
¢þ
>WENV182822497
OKBJ01003071
[OKBJ] human gut metagenome; human gut
436
510
+
Thr
TGT
[ENA]
¢þ
>WENV182822484
OKBJ01000641
[OKBJ] human gut metagenome; human gut
482
556
+
Asn
GTT
[ENA]
¢þ
>WENV182822489
OKBJ01001573
[OKBJ] human gut metagenome; human gut
505
419
-
Leu
GAG
[ENA]
¢þ
>WENV182822485
OKBJ01000641
[OKBJ] human gut metagenome; human gut
562
637
+
Thr
TGT
[ENA]
¢þ
>WENV182822487
OKBJ01001250
[OKBJ] human gut metagenome; human gut
584
500
-
Leu
CAA
[ENA]
¢þ
>WENV182822469
OKBJ01000013
[OKBJ] human gut metagenome; human gut
590
666
+
Met
CAT
[ENA]
¢þ
>WENV182822496
OKBJ01002734
[OKBJ] human gut metagenome; human gut
610
534
-
Val
GAC
[ENA]
¢þ
>WENV182822486
OKBJ01000927
[OKBJ] human gut metagenome; human gut
618
707
+
Ser
CGA
[ENA]
¢þ
>WENV182822470
OKBJ01000013
[OKBJ] human gut metagenome; human gut
675
759
+
Leu
TAG
[ENA]
¢þ
>WENV182822494
OKBJ01002226
[OKBJ] human gut metagenome; human gut
680
604
-
Asp
GTC
[ENA]
¢þ
>WENV182822471
OKBJ01000013
[OKBJ] human gut metagenome; human gut
783
857
+
Gln
CTG
[ENA]
¢þ
>WENV182822474
OKBJ01000100
[OKBJ] human gut metagenome; human gut
829
753
-
Pro
CGG
[ENA]
¢þ
>WENV182822490
OKBJ01001748
[OKBJ] human gut metagenome; human gut
835
760
-
Lys
TTT
[ENA]
¢þ
>WENV182822479
OKBJ01000226
[OKBJ] human gut metagenome; human gut
857
781
-
Arg
ACG
[ENA]
¢þ
>WENV182822473
OKBJ01000038
[OKBJ] human gut metagenome; human gut
912
996
+
Tyr
GTA
[ENA]
¢þ
>WENV182822480
OKBJ01000253
[OKBJ] human gut metagenome; human gut
921
997
+
Arg
CCG
[ENA]
¢þ
>WENV182822478
OKBJ01000226
[OKBJ] human gut metagenome; human gut
953
861
-
Ser
GCT
[ENA]
¢þ
>WENV182822481
OKBJ01000253
[OKBJ] human gut metagenome; human gut
1056
1131
+
His
GTG
[ENA]
¢þ
>WENV182822482
OKBJ01000253
[OKBJ] human gut metagenome; human gut
1152
1238
+
Leu
CAG
[ENA]
¢þ
>WENV182822483
OKBJ01000434
[OKBJ] human gut metagenome; human gut
1430
1354
-
Arg
TCT
[ENA]
¢þ
>WENV182822475
OKBJ01000176
[OKBJ] human gut metagenome; human gut
1813
1889
+
fMet
CAT
[ENA]
¢þ
>WENV182822476
OKBJ01000183
[OKBJ] human gut metagenome; human gut
2177
2253
+
Pro
GGG
[ENA]
¢þ
>WENV182822472
OKBJ01000025
[OKBJ] human gut metagenome; human gut
3464
3389
-
Gly
GCC
[ENA]
¢þ
>WENV182822468
OKBJ01000007
[OKBJ] human gut metagenome; human gut
3698
3624
-
Ala
TGC
[ENA]
¢þ
>WENV182822467
OKBJ01000007
[OKBJ] human gut metagenome; human gut
3803
3727
-
Ile
GAT
[ENA]
¢þ
>WENV182822466
OKBJ01000004
[OKBJ] human gut metagenome; human gut
3860
3935
+
Glu
TTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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