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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA gene List
[OKCN] human gut metagenome; human gut
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182825848
OKCN01002173
[OKCN] human gut metagenome; human gut
11
85
+
Lys
TTT
[ENA]
¢þ
>WENV182825825
OKCN01001243
[OKCN] human gut metagenome; human gut
62
136
+
Val
TAC
[ENA]
¢þ
>WENV182825849
OKCN01002173
[OKCN] human gut metagenome; human gut
103
174
+
Gly
GCC
[ENA]
¢þ
>WENV182825854
OKCN01002247
[OKCN] human gut metagenome; human gut
138
63
-
Ala
CGC
[ENA]
¢þ
>WENV182825774
OKCN01000418
[OKCN] human gut metagenome; human gut
153
78
-
His
GTG
[ENA]
¢þ
>WENV182825796
OKCN01000683
[OKCN] human gut metagenome; human gut
157
230
+
Trp
CCA
[ENA]
¢þ
>WENV182825813
OKCN01001010
[OKCN] human gut metagenome; human gut
188
103
-
Ser
GGA
[ENA]
¢þ
>WENV182825850
OKCN01002173
[OKCN] human gut metagenome; human gut
190
278
+
Leu
TAA
[ENA]
¢þ
>WENV182825842
OKCN01001828
[OKCN] human gut metagenome; human gut
237
163
-
Gln
CTG
[ENA]
¢þ
>WENV182825817
OKCN01001038
[OKCN] human gut metagenome; human gut
267
193
-
Lys
CTT
[ENA]
¢þ
>WENV182825846
OKCN01002085
[OKCN] human gut metagenome; human gut
269
345
+
Ile
GAT
[ENA]
¢þ
>WENV182825843
OKCN01001976
[OKCN] human gut metagenome; human gut
284
360
+
Arg
TCT
[ENA]
¢þ
>WENV182825851
OKCN01002173
[OKCN] human gut metagenome; human gut
291
365
+
Arg
ACG
[ENA]
¢þ
>WENV182825838
OKCN01001649
[OKCN] human gut metagenome; human gut
294
207
-
Leu
GAG
[ENA]
¢þ
>WENV182825834
OKCN01001493
[OKCN] human gut metagenome; human gut
332
422
+
Ser
GCT
[ENA]
¢þ
>WENV182825790
OKCN01000566
[OKCN] human gut metagenome; human gut
333
406
+
Lys
TTT
[ENA]
¢þ
>WENV182825823
OKCN01001180
[OKCN] human gut metagenome; human gut
346
419
+
Asn
GTT
[ENA]
¢þ
>WENV182825855
OKCN01002394
[OKCN] human gut metagenome; human gut
347
420
+
Thr
CGT
[ENA]
¢þ
>WENV182825841
OKCN01001828
[OKCN] human gut metagenome; human gut
349
276
-
Glu
CTC
[ENA]
¢þ
>WENV182825847
OKCN01002085
[OKCN] human gut metagenome; human gut
356
431
+
Ala
TGC
[ENA]
¢þ
>WENV182825852
OKCN01002173
[OKCN] human gut metagenome; human gut
374
447
+
Pro
TGG
[ENA]
¢þ
>WENV182825857
OKCN01002576
[OKCN] human gut metagenome; human gut
376
292
-
Tyr
GTA
[ENA]
¢þ
>WENV182825833
OKCN01001400
[OKCN] human gut metagenome; human gut
421
495
+
Thr
TGT
[ENA]
¢þ
>WENV182825802
OKCN01000814
[OKCN] human gut metagenome; human gut
461
388
-
Asn
GTT
[ENA]
¢þ
>WENV182825853
OKCN01002173
[OKCN] human gut metagenome; human gut
461
536
+
Ala
TGC
[ENA]
¢þ
>WENV182825856
OKCN01002576
[OKCN] human gut metagenome; human gut
464
389
-
Thr
TGT
[ENA]
¢þ
>WENV182825844
OKCN01001984
[OKCN] human gut metagenome; human gut
484
396
-
Leu
GAG
[ENA]
¢þ
>WENV182825845
OKCN01002081
[OKCN] human gut metagenome; human gut
520
594
+
Pro
TGG
[ENA]
¢þ
>WENV182825836
OKCN01001522
[OKCN] human gut metagenome; human gut
646
562
-
Leu
CAA
[ENA]
¢þ
>WENV182825835
OKCN01001493
[OKCN] human gut metagenome; human gut
652
725
+
Arg
ACG
[ENA]
¢þ
>WENV182825801
OKCN01000769
[OKCN] human gut metagenome; human gut
743
668
-
Lys
TTT
[ENA]
¢þ
>WENV182825824
OKCN01001231
[OKCN] human gut metagenome; human gut
785
709
-
Arg
TCT
[ENA]
¢þ
>WENV182825831
OKCN01001359
[OKCN] human gut metagenome; human gut
787
714
-
Ala
GGC
[ENA]
¢þ
>WENV182825811
OKCN01000998
[OKCN] human gut metagenome; human gut
795
877
+
Tyr
GTA
[ENA]
¢þ
>WENV182825803
OKCN01000832
[OKCN] human gut metagenome; human gut
843
770
-
Gly
TCC
[ENA]
¢þ
>WENV182825814
OKCN01001019
[OKCN] human gut metagenome; human gut
880
954
+
Glu
TTC
[ENA]
¢þ
>WENV182825819
OKCN01001090
[OKCN] human gut metagenome; human gut
891
818
-
Arg
CCT
[ENA]
¢þ
>WENV182825837
OKCN01001625
[OKCN] human gut metagenome; human gut
899
823
-
Asp
GTC
[ENA]
¢þ
>WENV182825810
OKCN01000969
[OKCN] human gut metagenome; human gut
915
844
-
Gln
TTG
[ENA]
¢þ
>WENV182825798
OKCN01000688
[OKCN] human gut metagenome; human gut
948
872
-
Val
GAC
[ENA]
¢þ
>WENV182825812
OKCN01000998
[OKCN] human gut metagenome; human gut
954
1028
+
Met
CAT
[ENA]
¢þ
>WENV182825830
OKCN01001355
[OKCN] human gut metagenome; human gut
955
1029
+
Leu
TAA
[ENA]
¢þ
>WENV182825797
OKCN01000688
[OKCN] human gut metagenome; human gut
1029
953
-
Val
GAC
[ENA]
¢þ
>WENV182825826
OKCN01001244
[OKCN] human gut metagenome; human gut
1047
1134
+
Ser
GGA
[ENA]
¢þ
>WENV182825840
OKCN01001788
[OKCN] human gut metagenome; human gut
1109
1035
-
Glu
CTC
[ENA]
¢þ
>WENV182825839
OKCN01001788
[OKCN] human gut metagenome; human gut
1187
1112
-
Lys
CTT
[ENA]
¢þ
>WENV182825806
OKCN01000859
[OKCN] human gut metagenome; human gut
1287
1362
+
Glu
TTC
[ENA]
¢þ
>WENV182825789
OKCN01000531
[OKCN] human gut metagenome; human gut
1339
1414
+
Thr
CGT
[ENA]
¢þ
>WENV182825815
OKCN01001019
[OKCN] human gut metagenome; human gut
1366
1440
+
Asp
GTC
[ENA]
¢þ
>WENV182825728
OKCN01000033
[OKCN] human gut metagenome; human gut
1426
1518
+
Ser
GCT
[ENA]
¢þ
>WENV182825832
OKCN01001388
[OKCN] human gut metagenome; human gut
1453
1379
-
Lys
TTT
[ENA]
¢þ
>WENV182825778
OKCN01000443
[OKCN] human gut metagenome; human gut
1476
1561
+
Ser
TGA
[ENA]
¢þ
>WENV182825816
OKCN01001019
[OKCN] human gut metagenome; human gut
1501
1576
+
Phe
GAA
[ENA]
¢þ
>WENV182825729
OKCN01000033
[OKCN] human gut metagenome; human gut
1523
1599
+
Arg
ACG
[ENA]
¢þ
>WENV182825828
OKCN01001260
[OKCN] human gut metagenome; human gut
1640
1713
+
Thr
CGT
[ENA]
¢þ
>WENV182825769
OKCN01000322
[OKCN] human gut metagenome; human gut
1676
1602
-
Lys
CTT
[ENA]
¢þ
>WENV182825783
OKCN01000481
[OKCN] human gut metagenome; human gut
1756
1682
-
Ile2
CAT
[ENA]
¢þ
>WENV182825829
OKCN01001300
[OKCN] human gut metagenome; human gut
1792
1867
+
Gly
GCC
[ENA]
¢þ
>WENV182825770
OKCN01000364
[OKCN] human gut metagenome; human gut
1878
1794
-
Leu
CAA
[ENA]
¢þ
>WENV182825741
OKCN01000088
[OKCN] human gut metagenome; human gut
1896
1821
-
Ile2
CAT
[ENA]
¢þ
>WENV182825742
OKCN01000099
[OKCN] human gut metagenome; human gut
1951
2027
+
Pro
CGG
[ENA]
¢þ
>WENV182825804
OKCN01000842
[OKCN] human gut metagenome; human gut
1975
2060
+
Ser
TGA
[ENA]
¢þ
>WENV182825820
OKCN01001106
[OKCN] human gut metagenome; human gut
2081
2157
+
Leu
CAA
[ENA]
¢þ
>WENV182825827
OKCN01001258
[OKCN] human gut metagenome; human gut
2110
2182
+
Glu
TTC
[ENA]
¢þ
>WENV182825821
OKCN01001176
[OKCN] human gut metagenome; human gut
2124
2197
+
Thr
CGT
[ENA]
¢þ
>WENV182825807
OKCN01000866
[OKCN] human gut metagenome; human gut
2182
2257
+
Arg
CCG
[ENA]
¢þ
>WENV182825730
OKCN01000048
[OKCN] human gut metagenome; human gut
2215
2121
-
SeC
TCA
[ENA]
¢þ
>WENV182825773
OKCN01000418
[OKCN] human gut metagenome; human gut
2220
2295
+
Arg
TCT
[ENA]
¢þ
>WENV182825745
OKCN01000155
[OKCN] human gut metagenome; human gut
2259
2185
-
Val
TAC
[ENA]
¢þ
>WENV182825772
OKCN01000400
[OKCN] human gut metagenome; human gut
2263
2336
+
Gly
CCC
[ENA]
¢þ
>WENV182825800
OKCN01000757
[OKCN] human gut metagenome; human gut
2283
2208
-
Trp
CCA
[ENA]
¢þ
>WENV182825822
OKCN01001176
[OKCN] human gut metagenome; human gut
2284
2366
+
Leu
TAG
[ENA]
¢þ
>WENV182825793
OKCN01000651
[OKCN] human gut metagenome; human gut
2287
2212
-
Gly
GCC
[ENA]
¢þ
>WENV182825809
OKCN01000910
[OKCN] human gut metagenome; human gut
2315
2389
+
Ile2
CAT
[ENA]
¢þ
>WENV182825795
OKCN01000671
[OKCN] human gut metagenome; human gut
2398
2324
-
Ala
TGC
[ENA]
¢þ
>WENV182825805
OKCN01000854
[OKCN] human gut metagenome; human gut
2442
2370
-
Arg
CCG
[ENA]
¢þ
>WENV182825799
OKCN01000748
[OKCN] human gut metagenome; human gut
2551
2476
-
Thr
TGT
[ENA]
¢þ
>WENV182825818
OKCN01001083
[OKCN] human gut metagenome; human gut
2586
2660
+
Arg
ACG
[ENA]
¢þ
>WENV182825756
OKCN01000206
[OKCN] human gut metagenome; human gut
2667
2595
-
Arg
CCT
[ENA]
¢þ
>WENV182825780
OKCN01000468
[OKCN] human gut metagenome; human gut
2707
2624
-
Leu
TAG
[ENA]
¢þ
>WENV182825753
OKCN01000190
[OKCN] human gut metagenome; human gut
2756
2830
+
Pro
GGG
[ENA]
¢þ
>WENV182825752
OKCN01000187
[OKCN] human gut metagenome; human gut
2830
2758
-
Val
GAC
[ENA]
¢þ
>WENV182825781
OKCN01000475
[OKCN] human gut metagenome; human gut
2874
2801
-
Ala
GGC
[ENA]
¢þ
>WENV182825751
OKCN01000187
[OKCN] human gut metagenome; human gut
2902
2831
-
Cys
GCA
[ENA]
¢þ
>WENV182825750
OKCN01000187
[OKCN] human gut metagenome; human gut
3003
2930
-
Gly
GCC
[ENA]
¢þ
>WENV182825792
OKCN01000647
[OKCN] human gut metagenome; human gut
3004
2930
-
Arg
TCT
[ENA]
¢þ
>WENV182825775
OKCN01000437
[OKCN] human gut metagenome; human gut
3045
3120
+
Gly
GCC
[ENA]
¢þ
>WENV182825808
OKCN01000896
[OKCN] human gut metagenome; human gut
3092
3178
+
Ser
CGA
[ENA]
¢þ
>WENV182825776
OKCN01000437
[OKCN] human gut metagenome; human gut
3172
3245
+
Cys
GCA
[ENA]
¢þ
>WENV182825779
OKCN01000448
[OKCN] human gut metagenome; human gut
3173
3260
+
Ser
GGA
[ENA]
¢þ
>WENV182825763
OKCN01000285
[OKCN] human gut metagenome; human gut
3198
3123
-
His
GTG
[ENA]
¢þ
>WENV182825777
OKCN01000437
[OKCN] human gut metagenome; human gut
3257
3343
+
Leu
TAA
[ENA]
¢þ
>WENV182825749
OKCN01000187
[OKCN] human gut metagenome; human gut
3382
3456
+
Val
CAC
[ENA]
¢þ
>WENV182825791
OKCN01000611
[OKCN] human gut metagenome; human gut
3697
3783
+
Leu
CAG
[ENA]
¢þ
>WENV182825748
OKCN01000156
[OKCN] human gut metagenome; human gut
3913
3839
-
Met
CAT
[ENA]
¢þ
>WENV182825743
OKCN01000113
[OKCN] human gut metagenome; human gut
4041
4125
+
Tyr
GTA
[ENA]
¢þ
>WENV182825747
OKCN01000156
[OKCN] human gut metagenome; human gut
4051
3978
-
Thr
GGT
[ENA]
¢þ
>WENV182825794
OKCN01000656
[OKCN] human gut metagenome; human gut
4070
3994
-
Pro
GGG
[ENA]
¢þ
>WENV182825788
OKCN01000528
[OKCN] human gut metagenome; human gut
4100
4027
-
Arg
CCT
[ENA]
¢þ
>WENV182825746
OKCN01000156
[OKCN] human gut metagenome; human gut
4334
4252
-
Tyr
GTA
[ENA]
¢þ
>WENV182825771
OKCN01000381
[OKCN] human gut metagenome; human gut
4408
4329
-
Gln
TTG
[ENA]
¢þ
>WENV182825787
OKCN01000521
[OKCN] human gut metagenome; human gut
4660
4580
-
Leu
TAA
[ENA]
¢þ
>WENV182825786
OKCN01000517
[OKCN] human gut metagenome; human gut
4775
4688
-
Ser
TGA
[ENA]
¢þ
>WENV182825764
OKCN01000301
[OKCN] human gut metagenome; human gut
4870
4944
+
Ile
GAT
[ENA]
¢þ
>WENV182825765
OKCN01000301
[OKCN] human gut metagenome; human gut
4986
5059
+
Ala
TGC
[ENA]
¢þ
>WENV182825785
OKCN01000497
[OKCN] human gut metagenome; human gut
5225
5150
-
Glu
CTC
[ENA]
¢þ
>WENV182825757
OKCN01000232
[OKCN] human gut metagenome; human gut
5345
5271
-
Pro
CGG
[ENA]
¢þ
>WENV182825761
OKCN01000234
[OKCN] human gut metagenome; human gut
5378
5303
-
Lys
TTT
[ENA]
¢þ
>WENV182825784
OKCN01000497
[OKCN] human gut metagenome; human gut
5433
5361
-
Gln
CTG
[ENA]
¢þ
>WENV182825760
OKCN01000234
[OKCN] human gut metagenome; human gut
5458
5383
-
Val
TAC
[ENA]
¢þ
>WENV182825782
OKCN01000476
[OKCN] human gut metagenome; human gut
5698
5785
+
Ser
GCT
[ENA]
¢þ
>WENV182825762
OKCN01000243
[OKCN] human gut metagenome; human gut
5704
5777
+
Ala
CGC
[ENA]
¢þ
>WENV182825754
OKCN01000196
[OKCN] human gut metagenome; human gut
6818
6743
-
Phe
GAA
[ENA]
¢þ
>WENV182825736
OKCN01000054
[OKCN] human gut metagenome; human gut
7069
6996
-
Gly
CCC
[ENA]
¢þ
>WENV182825766
OKCN01000320
[OKCN] human gut metagenome; human gut
7168
7244
+
Arg
CCG
[ENA]
¢þ
>WENV182825767
OKCN01000320
[OKCN] human gut metagenome; human gut
7312
7387
+
His
GTG
[ENA]
¢þ
>WENV182825768
OKCN01000320
[OKCN] human gut metagenome; human gut
7409
7495
+
Leu
CAG
[ENA]
¢þ
>WENV182825758
OKCN01000234
[OKCN] human gut metagenome; human gut
8152
8227
+
Ala
GGC
[ENA]
¢þ
>WENV182825759
OKCN01000234
[OKCN] human gut metagenome; human gut
8269
8344
+
Ala
GGC
[ENA]
¢þ
>WENV182825740
OKCN01000062
[OKCN] human gut metagenome; human gut
8350
8424
+
fMet
CAT
[ENA]
¢þ
>WENV182825755
OKCN01000199
[OKCN] human gut metagenome; human gut
9183
9108
-
Pro
TGG
[ENA]
¢þ
>WENV182825737
OKCN01000056
[OKCN] human gut metagenome; human gut
9411
9487
+
Asp
GTC
[ENA]
¢þ
>WENV182825738
OKCN01000056
[OKCN] human gut metagenome; human gut
9540
9615
+
Trp
CCA
[ENA]
¢þ
>WENV182825731
OKCN01000053
[OKCN] human gut metagenome; human gut
10298
10374
+
Pro
TGG
[ENA]
¢þ
>WENV182825744
OKCN01000146
[OKCN] human gut metagenome; human gut
11613
11538
-
Arg
TCT
[ENA]
¢þ
>WENV182825739
OKCN01000057
[OKCN] human gut metagenome; human gut
12525
12599
+
Ile
GAT
[ENA]
¢þ
>WENV182825725
OKCN01000013
[OKCN] human gut metagenome; human gut
12574
12650
+
Met
CAT
[ENA]
¢þ
>WENV182825726
OKCN01000013
[OKCN] human gut metagenome; human gut
12692
12766
+
Gln
CTG
[ENA]
¢þ
>WENV182825727
OKCN01000013
[OKCN] human gut metagenome; human gut
12801
12875
+
Gln
CTG
[ENA]
¢þ
>WENV182825732
OKCN01000053
[OKCN] human gut metagenome; human gut
18012
18087
+
Thr
TGT
[ENA]
¢þ
>WENV182825733
OKCN01000053
[OKCN] human gut metagenome; human gut
18096
18180
+
Tyr
GTA
[ENA]
¢þ
>WENV182825734
OKCN01000053
[OKCN] human gut metagenome; human gut
18297
18371
+
Gly
TCC
[ENA]
¢þ
>WENV182825735
OKCN01000053
[OKCN] human gut metagenome; human gut
18378
18453
+
Thr
GGT
[ENA]
¢þ
>WENV182825723
OKCN01000002
[OKCN] human gut metagenome; human gut
38244
38330
+
Leu
GAG
[ENA]
¢þ
>WENV182825724
OKCN01000002
[OKCN] human gut metagenome; human gut
40151
40227
+
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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