This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKDY] human gut metagenome; human gut
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182830405
OKDY01001319
[OKDY] human gut metagenome; human gut
2
75
+
Lys
TTT
[ENA]
¢þ
>WENV182830379
OKDY01000085
[OKDY] human gut metagenome; human gut
6
81
+
Lys
CTT
[ENA]
¢þ
>WENV182830406
OKDY01001414
[OKDY] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182830387
OKDY01000186
[OKDY] human gut metagenome; human gut
60
134
+
Cys
GCA
[ENA]
¢þ
>WENV182830412
OKDY01001671
[OKDY] human gut metagenome; human gut
61
135
+
Asn
GTT
[ENA]
¢þ
>WENV182830367
OKDY01000046
[OKDY] human gut metagenome; human gut
96
186
+
Ser
GGA
[ENA]
¢þ
>WENV182830416
OKDY01002018
[OKDY] human gut metagenome; human gut
142
65
-
Phe
GAA
[ENA]
¢þ
>WENV182830407
OKDY01001414
[OKDY] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182830368
OKDY01000046
[OKDY] human gut metagenome; human gut
202
275
+
Glu
TTC
[ENA]
¢þ
>WENV182830417
OKDY01002090
[OKDY] human gut metagenome; human gut
212
286
+
Thr
TGT
[ENA]
¢þ
>WENV182830415
OKDY01002018
[OKDY] human gut metagenome; human gut
221
146
-
Asp
GTC
[ENA]
¢þ
>WENV182830408
OKDY01001414
[OKDY] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182830400
OKDY01000294
[OKDY] human gut metagenome; human gut
245
169
-
Arg
TCG
[ENA]
¢þ
>WENV182830369
OKDY01000046
[OKDY] human gut metagenome; human gut
301
375
+
Val
TAC
[ENA]
¢þ
>WENV182830418
OKDY01002090
[OKDY] human gut metagenome; human gut
314
396
+
Tyr
GTA
[ENA]
¢þ
>WENV182830409
OKDY01001414
[OKDY] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182830414
OKDY01002018
[OKDY] human gut metagenome; human gut
343
268
-
fMet
CAT
[ENA]
¢þ
>WENV182830399
OKDY01000294
[OKDY] human gut metagenome; human gut
369
296
-
Gly
TCC
[ENA]
¢þ
>WENV182830419
OKDY01002110
[OKDY] human gut metagenome; human gut
381
463
+
Leu
GAG
[ENA]
¢þ
>WENV182830370
OKDY01000046
[OKDY] human gut metagenome; human gut
385
460
+
Asp
GTC
[ENA]
¢þ
>WENV182830410
OKDY01001414
[OKDY] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182830402
OKDY01000366
[OKDY] human gut metagenome; human gut
444
358
-
Leu
CAA
[ENA]
¢þ
>WENV182830398
OKDY01000294
[OKDY] human gut metagenome; human gut
448
374
-
Gly
GCC
[ENA]
¢þ
>WENV182830413
OKDY01002018
[OKDY] human gut metagenome; human gut
465
376
-
Ser
TGA
[ENA]
¢þ
>WENV182830411
OKDY01001414
[OKDY] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182830371
OKDY01000046
[OKDY] human gut metagenome; human gut
506
578
+
Phe
GAA
[ENA]
¢þ
>WENV182830397
OKDY01000294
[OKDY] human gut metagenome; human gut
558
475
-
Leu
TAG
[ENA]
¢þ
>WENV182830372
OKDY01000046
[OKDY] human gut metagenome; human gut
583
665
+
Tyr
GTA
[ENA]
¢þ
>WENV182830396
OKDY01000294
[OKDY] human gut metagenome; human gut
644
569
-
Lys
TTT
[ENA]
¢þ
>WENV182830373
OKDY01000046
[OKDY] human gut metagenome; human gut
669
742
+
Trp
CCA
[ENA]
¢þ
>WENV182830395
OKDY01000294
[OKDY] human gut metagenome; human gut
725
651
-
Gln
TTG
[ENA]
¢þ
>WENV182830374
OKDY01000046
[OKDY] human gut metagenome; human gut
779
852
+
His
GTG
[ENA]
¢þ
>WENV182830390
OKDY01000202
[OKDY] human gut metagenome; human gut
794
869
+
Trp
CCA
[ENA]
¢þ
>WENV182830394
OKDY01000294
[OKDY] human gut metagenome; human gut
806
731
-
His
GTG
[ENA]
¢þ
>WENV182830375
OKDY01000046
[OKDY] human gut metagenome; human gut
865
938
+
Gln
TTG
[ENA]
¢þ
>WENV182830393
OKDY01000294
[OKDY] human gut metagenome; human gut
887
811
-
Arg
TCT
[ENA]
¢þ
>WENV182830401
OKDY01000346
[OKDY] human gut metagenome; human gut
891
802
-
Ser
GGA
[ENA]
¢þ
>WENV182830376
OKDY01000046
[OKDY] human gut metagenome; human gut
963
1033
+
Cys
GCA
[ENA]
¢þ
>WENV182830392
OKDY01000294
[OKDY] human gut metagenome; human gut
1040
967
-
Gly
TCC
[ENA]
¢þ
>WENV182830377
OKDY01000046
[OKDY] human gut metagenome; human gut
1046
1131
+
Leu
CAA
[ENA]
¢þ
>WENV182830391
OKDY01000294
[OKDY] human gut metagenome; human gut
1120
1045
-
Pro
TGG
[ENA]
¢þ
>WENV182830404
OKDY01000382
[OKDY] human gut metagenome; human gut
2196
2121
-
Ala
TGC
[ENA]
¢þ
>WENV182830403
OKDY01000382
[OKDY] human gut metagenome; human gut
2278
2202
-
Ile2
CAT
[ENA]
¢þ
>WENV182830389
OKDY01000195
[OKDY] human gut metagenome; human gut
2520
2446
-
Arg
CCT
[ENA]
¢þ
>WENV182830380
OKDY01000111
[OKDY] human gut metagenome; human gut
2947
2862
-
Leu
GAG
[ENA]
¢þ
>WENV182830365
OKDY01000040
[OKDY] human gut metagenome; human gut
3171
3098
-
Gln
TTG
[ENA]
¢þ
>WENV182830364
OKDY01000040
[OKDY] human gut metagenome; human gut
3261
3179
-
Tyr
GTA
[ENA]
¢þ
>WENV182830383
OKDY01000128
[OKDY] human gut metagenome; human gut
4110
4022
-
Leu
TAA
[ENA]
¢þ
>WENV182830382
OKDY01000128
[OKDY] human gut metagenome; human gut
4203
4127
-
Met
CAT
[ENA]
¢þ
>WENV182830381
OKDY01000128
[OKDY] human gut metagenome; human gut
4282
4207
-
fMet
CAT
[ENA]
¢þ
>WENV182830388
OKDY01000187
[OKDY] human gut metagenome; human gut
4975
5051
+
Arg
ACG
[ENA]
¢þ
>WENV182830366
OKDY01000042
[OKDY] human gut metagenome; human gut
4995
5083
+
Leu
TAA
[ENA]
¢þ
>WENV182830384
OKDY01000129
[OKDY] human gut metagenome; human gut
7023
7113
+
Ser
TGA
[ENA]
¢þ
>WENV182830385
OKDY01000129
[OKDY] human gut metagenome; human gut
7147
7237
+
Ser
GCT
[ENA]
¢þ
>WENV182830386
OKDY01000129
[OKDY] human gut metagenome; human gut
7872
7962
+
Ser
TGA
[ENA]
¢þ
>WENV182830378
OKDY01000074
[OKDY] human gut metagenome; human gut
8980
9054
+
Asn
GTT
[ENA]
¢þ
>WENV182830362
OKDY01000022
[OKDY] human gut metagenome; human gut
10622
10697
+
Ile2
CAT
[ENA]
¢þ
>WENV182830361
OKDY01000018
[OKDY] human gut metagenome; human gut
12284
12195
-
Ser
CGA
[ENA]
¢þ
>WENV182830363
OKDY01000040
[OKDY] human gut metagenome; human gut
14595
14509
-
Leu
GAG
[ENA]
¢þ
>WENV182830358
OKDY01000015
[OKDY] human gut metagenome; human gut
17564
17639
+
Thr
GGT
[ENA]
¢þ
>WENV182830357
OKDY01000014
[OKDY] human gut metagenome; human gut
22070
22143
+
Arg
CCG
[ENA]
¢þ
>WENV182830359
OKDY01000017
[OKDY] human gut metagenome; human gut
26137
26211
+
Lys
CTT
[ENA]
¢þ
>WENV182830355
OKDY01000003
[OKDY] human gut metagenome; human gut
37932
37857
-
Arg
CCT
[ENA]
¢þ
>WENV182830360
OKDY01000018
[OKDY] human gut metagenome; human gut
43859
43784
-
Asn
GTT
[ENA]
¢þ
>WENV182830354
OKDY01000003
[OKDY] human gut metagenome; human gut
87270
87345
+
Arg
TCT
[ENA]
¢þ
>WENV182830353
OKDY01000001
[OKDY] human gut metagenome; human gut
106933
106862
-
Trp
CCA
[ENA]
¢þ
>WENV182830350
OKDY01000001
[OKDY] human gut metagenome; human gut
160620
160692
+
Thr
GGT
[ENA]
¢þ
>WENV182830356
OKDY01000006
[OKDY] human gut metagenome; human gut
183513
183585
+
Thr
CGT
[ENA]
¢þ
>WENV182830352
OKDY01000001
[OKDY] human gut metagenome; human gut
227977
227904
-
Ile2
CAT
[ENA]
¢þ
>WENV182830351
OKDY01000001
[OKDY] human gut metagenome; human gut
251668
251597
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK