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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKES] human gut metagenome; human gut
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182833343
OKES01001493
[OKES] human gut metagenome; human gut
7
82
+
Ile2
CAT
[ENA]
¢þ
>WENV182833316
OKES01000286
[OKES] human gut metagenome; human gut
98
172
+
Gln
CTG
[ENA]
¢þ
>WENV182833315
OKES01000274
[OKES] human gut metagenome; human gut
99
174
+
Trp
CCA
[ENA]
¢þ
>WENV182833318
OKES01000308
[OKES] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182833307
OKES01000108
[OKES] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182833274
OKES01000020
[OKES] human gut metagenome; human gut
281
205
-
Pro
CGG
[ENA]
¢þ
>WENV182833345
OKES01001924
[OKES] human gut metagenome; human gut
295
220
-
Pro
TGG
[ENA]
¢þ
>WENV182833344
OKES01001924
[OKES] human gut metagenome; human gut
389
302
-
Ser
TGA
[ENA]
¢þ
>WENV182833346
OKES01002541
[OKES] human gut metagenome; human gut
542
467
-
Gly
GCC
[ENA]
¢þ
>WENV182833335
OKES01000686
[OKES] human gut metagenome; human gut
688
613
-
Thr
CGT
[ENA]
¢þ
>WENV182833323
OKES01000413
[OKES] human gut metagenome; human gut
750
675
-
Phe
GAA
[ENA]
¢þ
>WENV182833342
OKES01001247
[OKES] human gut metagenome; human gut
936
1009
+
Gly
CCC
[ENA]
¢þ
>WENV182833341
OKES01001189
[OKES] human gut metagenome; human gut
951
1026
+
Ile2
CAT
[ENA]
¢þ
>WENV182833340
OKES01001030
[OKES] human gut metagenome; human gut
1103
1027
-
Arg
TCT
[ENA]
¢þ
>WENV182833334
OKES01000567
[OKES] human gut metagenome; human gut
1768
1681
-
Ser
TGA
[ENA]
¢þ
>WENV182833336
OKES01000713
[OKES] human gut metagenome; human gut
1913
1827
-
Leu
GAG
[ENA]
¢þ
>WENV182833327
OKES01000422
[OKES] human gut metagenome; human gut
2151
2076
-
Asn
GTT
[ENA]
¢þ
>WENV182833320
OKES01000323
[OKES] human gut metagenome; human gut
2275
2199
-
fMet
CAT
[ENA]
¢þ
>WENV182833290
OKES01000047
[OKES] human gut metagenome; human gut
2706
2781
+
Ala
GGC
[ENA]
¢þ
>WENV182833317
OKES01000300
[OKES] human gut metagenome; human gut
2760
2684
-
Asp
GTC
[ENA]
¢þ
>WENV182833329
OKES01000444
[OKES] human gut metagenome; human gut
2919
3005
+
Leu
GAG
[ENA]
¢þ
>WENV182833337
OKES01000766
[OKES] human gut metagenome; human gut
3463
3538
+
Thr
TGT
[ENA]
¢þ
>WENV182833338
OKES01000766
[OKES] human gut metagenome; human gut
3549
3633
+
Tyr
GTA
[ENA]
¢þ
>WENV182833321
OKES01000326
[OKES] human gut metagenome; human gut
3551
3638
+
Ser
TGA
[ENA]
¢þ
>WENV182833339
OKES01000766
[OKES] human gut metagenome; human gut
3749
3823
+
Gly
TCC
[ENA]
¢þ
>WENV182833283
OKES01000036
[OKES] human gut metagenome; human gut
3828
3902
+
Arg
CCT
[ENA]
¢þ
>WENV182833324
OKES01000417
[OKES] human gut metagenome; human gut
4194
4119
-
Thr
CGT
[ENA]
¢þ
>WENV182833319
OKES01000323
[OKES] human gut metagenome; human gut
4225
4139
-
Leu
GAG
[ENA]
¢þ
>WENV182833326
OKES01000422
[OKES] human gut metagenome; human gut
4663
4588
-
Asn
GTT
[ENA]
¢þ
>WENV182833328
OKES01000438
[OKES] human gut metagenome; human gut
4798
4885
+
Ser
GGA
[ENA]
¢þ
>WENV182833333
OKES01000474
[OKES] human gut metagenome; human gut
5284
5208
-
Val
GAC
[ENA]
¢þ
>WENV182833332
OKES01000474
[OKES] human gut metagenome; human gut
5365
5289
-
Val
GAC
[ENA]
¢þ
>WENV182833303
OKES01000093
[OKES] human gut metagenome; human gut
5671
5746
+
Ile2
CAT
[ENA]
¢þ
>WENV182833314
OKES01000220
[OKES] human gut metagenome; human gut
5765
5671
-
SeC
TCA
[ENA]
¢þ
>WENV182833325
OKES01000422
[OKES] human gut metagenome; human gut
6411
6486
+
Asn
GTT
[ENA]
¢þ
>WENV182833276
OKES01000021
[OKES] human gut metagenome; human gut
6670
6595
-
Phe
GAA
[ENA]
¢þ
>WENV182833330
OKES01000444
[OKES] human gut metagenome; human gut
6936
7012
+
fMet
CAT
[ENA]
¢þ
>WENV182833331
OKES01000458
[OKES] human gut metagenome; human gut
7545
7629
+
Tyr
GTA
[ENA]
¢þ
>WENV182833322
OKES01000351
[OKES] human gut metagenome; human gut
8314
8239
-
Phe
GAA
[ENA]
¢þ
>WENV182833308
OKES01000147
[OKES] human gut metagenome; human gut
10139
10063
-
Arg
TCT
[ENA]
¢þ
>WENV182833273
OKES01000013
[OKES] human gut metagenome; human gut
11716
11640
-
Pro
GGG
[ENA]
¢þ
>WENV182833282
OKES01000035
[OKES] human gut metagenome; human gut
13853
13766
-
Ser
TGA
[ENA]
¢þ
>WENV182833309
OKES01000151
[OKES] human gut metagenome; human gut
17355
17271
-
Leu
CAA
[ENA]
¢þ
>WENV182833310
OKES01000173
[OKES] human gut metagenome; human gut
18328
18404
+
Pro
TGG
[ENA]
¢þ
>WENV182833313
OKES01000182
[OKES] human gut metagenome; human gut
20696
20610
-
Leu
TAA
[ENA]
¢þ
>WENV182833312
OKES01000182
[OKES] human gut metagenome; human gut
20783
20710
-
Cys
GCA
[ENA]
¢þ
>WENV182833311
OKES01000182
[OKES] human gut metagenome; human gut
20899
20824
-
Gly
GCC
[ENA]
¢þ
>WENV182833264
OKES01000001
[OKES] human gut metagenome; human gut
21250
21161
-
Ser
CGA
[ENA]
¢þ
>WENV182833260
OKES01000001
[OKES] human gut metagenome; human gut
22242
22317
+
Asn
GTT
[ENA]
¢þ
>WENV182833291
OKES01000047
[OKES] human gut metagenome; human gut
23178
23104
-
Arg
CCT
[ENA]
¢þ
>WENV182833281
OKES01000033
[OKES] human gut metagenome; human gut
23491
23566
+
Phe
GAA
[ENA]
¢þ
>WENV182833306
OKES01000095
[OKES] human gut metagenome; human gut
23860
23775
-
Leu
CAG
[ENA]
¢þ
>WENV182833305
OKES01000095
[OKES] human gut metagenome; human gut
23956
23881
-
His
GTG
[ENA]
¢þ
>WENV182833304
OKES01000095
[OKES] human gut metagenome; human gut
24088
24012
-
Arg
CCG
[ENA]
¢þ
>WENV182833261
OKES01000001
[OKES] human gut metagenome; human gut
27125
27200
+
Asn
GTT
[ENA]
¢þ
>WENV182833302
OKES01000077
[OKES] human gut metagenome; human gut
27372
27448
+
Pro
GGG
[ENA]
¢þ
>WENV182833298
OKES01000057
[OKES] human gut metagenome; human gut
27468
27393
-
Thr
TGT
[ENA]
¢þ
>WENV182833300
OKES01000060
[OKES] human gut metagenome; human gut
29052
28977
-
Ile2
CAT
[ENA]
¢þ
>WENV182833263
OKES01000001
[OKES] human gut metagenome; human gut
36123
36048
-
Asn
GTT
[ENA]
¢þ
>WENV182833262
OKES01000001
[OKES] human gut metagenome; human gut
37881
37956
+
Asn
GTT
[ENA]
¢þ
>WENV182833289
OKES01000041
[OKES] human gut metagenome; human gut
37882
37788
-
SeC
TCA
[ENA]
¢þ
>WENV182833268
OKES01000005
[OKES] human gut metagenome; human gut
39162
39237
+
Thr
CGT
[ENA]
¢þ
>WENV182833299
OKES01000059
[OKES] human gut metagenome; human gut
39297
39210
-
Ser
TGA
[ENA]
¢þ
>WENV182833272
OKES01000011
[OKES] human gut metagenome; human gut
42349
42433
+
Leu
CAA
[ENA]
¢þ
>WENV182833301
OKES01000068
[OKES] human gut metagenome; human gut
42508
42432
-
fMet
CAT
[ENA]
¢þ
>WENV182833288
OKES01000036
[OKES] human gut metagenome; human gut
56655
56580
-
Ala
GGC
[ENA]
¢þ
>WENV182833292
OKES01000052
[OKES] human gut metagenome; human gut
56736
56812
+
Met
CAT
[ENA]
¢þ
>WENV182833293
OKES01000052
[OKES] human gut metagenome; human gut
56821
56905
+
Leu
TAG
[ENA]
¢þ
>WENV182833294
OKES01000052
[OKES] human gut metagenome; human gut
56929
57003
+
Gln
TTG
[ENA]
¢þ
>WENV182833295
OKES01000052
[OKES] human gut metagenome; human gut
57027
57103
+
Met
CAT
[ENA]
¢þ
>WENV182833296
OKES01000052
[OKES] human gut metagenome; human gut
57151
57225
+
Gln
CTG
[ENA]
¢þ
>WENV182833297
OKES01000052
[OKES] human gut metagenome; human gut
57301
57375
+
Gln
CTG
[ENA]
¢þ
>WENV182833284
OKES01000036
[OKES] human gut metagenome; human gut
59364
59439
+
Val
TAC
[ENA]
¢þ
>WENV182833285
OKES01000036
[OKES] human gut metagenome; human gut
59486
59561
+
Val
TAC
[ENA]
¢þ
>WENV182833286
OKES01000036
[OKES] human gut metagenome; human gut
59608
59683
+
Val
TAC
[ENA]
¢þ
>WENV182833287
OKES01000036
[OKES] human gut metagenome; human gut
59688
59763
+
Lys
TTT
[ENA]
¢þ
>WENV182833279
OKES01000026
[OKES] human gut metagenome; human gut
70873
70800
-
Gly
CCC
[ENA]
¢þ
>WENV182833280
OKES01000031
[OKES] human gut metagenome; human gut
72672
72596
-
Val
GAC
[ENA]
¢þ
>WENV182833275
OKES01000021
[OKES] human gut metagenome; human gut
78500
78573
+
Gly
CCC
[ENA]
¢þ
>WENV182833271
OKES01000008
[OKES] human gut metagenome; human gut
79176
79082
-
SeC
TCA
[ENA]
¢þ
>WENV182833278
OKES01000023
[OKES] human gut metagenome; human gut
79921
79845
-
Arg
ACG
[ENA]
¢þ
>WENV182833277
OKES01000023
[OKES] human gut metagenome; human gut
80226
80150
-
Arg
ACG
[ENA]
¢þ
>WENV182833267
OKES01000003
[OKES] human gut metagenome; human gut
87714
87639
-
Asn
GTT
[ENA]
¢þ
>WENV182833266
OKES01000003
[OKES] human gut metagenome; human gut
88705
88794
+
Ser
CGA
[ENA]
¢þ
>WENV182833270
OKES01000005
[OKES] human gut metagenome; human gut
93935
93859
-
Asp
GTC
[ENA]
¢þ
>WENV182833269
OKES01000005
[OKES] human gut metagenome; human gut
103388
103312
-
Asp
GTC
[ENA]
¢þ
>WENV182833265
OKES01000002
[OKES] human gut metagenome; human gut
124860
124784
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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