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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKEZ] human gut metagenome; human gut
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182834148
OKEZ01001755
[OKEZ] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182834129
OKEZ01000792
[OKEZ] human gut metagenome; human gut
67
141
+
Ala
TGC
[ENA]
¢þ
>WENV182834045
OKEZ01000046
[OKEZ] human gut metagenome; human gut
73
158
+
Leu
CAG
[ENA]
¢þ
>WENV182834088
OKEZ01000256
[OKEZ] human gut metagenome; human gut
81
155
+
Val
TAC
[ENA]
¢þ
>WENV182834056
OKEZ01000086
[OKEZ] human gut metagenome; human gut
89
163
+
Gln
TTG
[ENA]
¢þ
>WENV182834105
OKEZ01000352
[OKEZ] human gut metagenome; human gut
98
173
+
Trp
CCA
[ENA]
¢þ
>WENV182834097
OKEZ01000278
[OKEZ] human gut metagenome; human gut
100
176
+
fMet
CAT
[ENA]
¢þ
>WENV182834154
OKEZ01002221
[OKEZ] human gut metagenome; human gut
117
193
+
Ile
GAT
[ENA]
¢þ
>WENV182834149
OKEZ01001755
[OKEZ] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182834130
OKEZ01000792
[OKEZ] human gut metagenome; human gut
163
238
+
Met
CAT
[ENA]
¢þ
>WENV182834089
OKEZ01000256
[OKEZ] human gut metagenome; human gut
165
240
+
Asp
GTC
[ENA]
¢þ
>WENV182834057
OKEZ01000086
[OKEZ] human gut metagenome; human gut
185
261
+
Met
CAT
[ENA]
¢þ
>WENV182834098
OKEZ01000278
[OKEZ] human gut metagenome; human gut
221
297
+
fMet
CAT
[ENA]
¢þ
>WENV182834150
OKEZ01001755
[OKEZ] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182834106
OKEZ01000354
[OKEZ] human gut metagenome; human gut
248
324
+
Arg
ACG
[ENA]
¢þ
>WENV182834063
OKEZ01000103
[OKEZ] human gut metagenome; human gut
254
181
-
Arg
CCG
[ENA]
¢þ
>WENV182834131
OKEZ01000792
[OKEZ] human gut metagenome; human gut
257
332
+
Ile2
CAT
[ENA]
¢þ
>WENV182834090
OKEZ01000256
[OKEZ] human gut metagenome; human gut
286
358
+
Phe
GAA
[ENA]
¢þ
>WENV182834155
OKEZ01002221
[OKEZ] human gut metagenome; human gut
300
375
+
Ala
TGC
[ENA]
¢þ
>WENV182834058
OKEZ01000086
[OKEZ] human gut metagenome; human gut
307
381
+
Gln
CTG
[ENA]
¢þ
>WENV182834151
OKEZ01001755
[OKEZ] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182834091
OKEZ01000256
[OKEZ] human gut metagenome; human gut
363
445
+
Tyr
GTA
[ENA]
¢þ
>WENV182834132
OKEZ01000792
[OKEZ] human gut metagenome; human gut
365
454
+
Ser
TGA
[ENA]
¢þ
>WENV182834152
OKEZ01001755
[OKEZ] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182834092
OKEZ01000256
[OKEZ] human gut metagenome; human gut
449
522
+
Trp
CCA
[ENA]
¢þ
>WENV182834133
OKEZ01000792
[OKEZ] human gut metagenome; human gut
487
562
+
fMet
CAT
[ENA]
¢þ
>WENV182834153
OKEZ01001755
[OKEZ] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182834118
OKEZ01000485
[OKEZ] human gut metagenome; human gut
507
432
-
Ile2
CAT
[ENA]
¢þ
>WENV182834074
OKEZ01000130
[OKEZ] human gut metagenome; human gut
507
432
-
Arg
TCT
[ENA]
¢þ
>WENV182834093
OKEZ01000256
[OKEZ] human gut metagenome; human gut
559
632
+
His
GTG
[ENA]
¢þ
>WENV182834144
OKEZ01001213
[OKEZ] human gut metagenome; human gut
577
652
+
Val
TAC
[ENA]
¢þ
>WENV182834134
OKEZ01000792
[OKEZ] human gut metagenome; human gut
600
676
+
Asp
GTC
[ENA]
¢þ
>WENV182834094
OKEZ01000256
[OKEZ] human gut metagenome; human gut
645
718
+
Gln
TTG
[ENA]
¢þ
>WENV182834145
OKEZ01001213
[OKEZ] human gut metagenome; human gut
659
734
+
Thr
TGT
[ENA]
¢þ
>WENV182834135
OKEZ01000792
[OKEZ] human gut metagenome; human gut
678
748
+
Gly
TCC
[ENA]
¢þ
>WENV182834146
OKEZ01001213
[OKEZ] human gut metagenome; human gut
740
814
+
Lys
TTT
[ENA]
¢þ
>WENV182834095
OKEZ01000256
[OKEZ] human gut metagenome; human gut
743
813
+
Cys
GCA
[ENA]
¢þ
>WENV182834136
OKEZ01000792
[OKEZ] human gut metagenome; human gut
757
832
+
Ile
GAT
[ENA]
¢þ
>WENV182834096
OKEZ01000256
[OKEZ] human gut metagenome; human gut
826
911
+
Leu
CAA
[ENA]
¢þ
>WENV182834147
OKEZ01001213
[OKEZ] human gut metagenome; human gut
832
906
+
Gly
GCC
[ENA]
¢þ
>WENV182834137
OKEZ01000792
[OKEZ] human gut metagenome; human gut
845
918
+
Glu
TTC
[ENA]
¢þ
>WENV182834138
OKEZ01000792
[OKEZ] human gut metagenome; human gut
930
1019
+
Ser
TGA
[ENA]
¢þ
>WENV182834139
OKEZ01000792
[OKEZ] human gut metagenome; human gut
1052
1127
+
fMet
CAT
[ENA]
¢þ
>WENV182834140
OKEZ01000792
[OKEZ] human gut metagenome; human gut
1175
1251
+
Asp
GTC
[ENA]
¢þ
>WENV182834124
OKEZ01000715
[OKEZ] human gut metagenome; human gut
1248
1323
+
Thr
TGT
[ENA]
¢þ
>WENV182834119
OKEZ01000565
[OKEZ] human gut metagenome; human gut
1249
1335
+
Leu
GAG
[ENA]
¢þ
>WENV182834141
OKEZ01000792
[OKEZ] human gut metagenome; human gut
1253
1323
+
Gly
TCC
[ENA]
¢þ
>WENV182834142
OKEZ01000792
[OKEZ] human gut metagenome; human gut
1332
1407
+
Ile
GAT
[ENA]
¢þ
>WENV182834125
OKEZ01000715
[OKEZ] human gut metagenome; human gut
1334
1418
+
Tyr
GTA
[ENA]
¢þ
>WENV182834121
OKEZ01000575
[OKEZ] human gut metagenome; human gut
1384
1313
-
Trp
CCA
[ENA]
¢þ
>WENV182834143
OKEZ01000792
[OKEZ] human gut metagenome; human gut
1416
1505
+
Ser
GCT
[ENA]
¢þ
>WENV182834123
OKEZ01000637
[OKEZ] human gut metagenome; human gut
1522
1448
-
Asn
GTT
[ENA]
¢þ
>WENV182834126
OKEZ01000715
[OKEZ] human gut metagenome; human gut
1538
1612
+
Gly
TCC
[ENA]
¢þ
>WENV182834127
OKEZ01000715
[OKEZ] human gut metagenome; human gut
1618
1693
+
Thr
GGT
[ENA]
¢þ
>WENV182834128
OKEZ01000735
[OKEZ] human gut metagenome; human gut
1672
1598
-
Gln
CTG
[ENA]
¢þ
>WENV182834109
OKEZ01000369
[OKEZ] human gut metagenome; human gut
1785
1709
-
Val
GAC
[ENA]
¢þ
>WENV182834065
OKEZ01000109
[OKEZ] human gut metagenome; human gut
1808
1733
-
Phe
GAA
[ENA]
¢þ
>WENV182834108
OKEZ01000369
[OKEZ] human gut metagenome; human gut
1866
1790
-
Val
GAC
[ENA]
¢þ
>WENV182834107
OKEZ01000369
[OKEZ] human gut metagenome; human gut
1947
1871
-
Val
GAC
[ENA]
¢þ
>WENV182834083
OKEZ01000190
[OKEZ] human gut metagenome; human gut
2716
2791
+
Ala
GGC
[ENA]
¢þ
>WENV182834122
OKEZ01000618
[OKEZ] human gut metagenome; human gut
2763
2838
+
Val
TAC
[ENA]
¢þ
>WENV182834084
OKEZ01000190
[OKEZ] human gut metagenome; human gut
2833
2908
+
Ala
GGC
[ENA]
¢þ
>WENV182834059
OKEZ01000092
[OKEZ] human gut metagenome; human gut
2894
2821
-
Gly
CCC
[ENA]
¢þ
>WENV182834111
OKEZ01000386
[OKEZ] human gut metagenome; human gut
2918
3004
+
Leu
CAG
[ENA]
¢þ
>WENV182834112
OKEZ01000386
[OKEZ] human gut metagenome; human gut
3033
3119
+
Leu
CAG
[ENA]
¢þ
>WENV182834117
OKEZ01000454
[OKEZ] human gut metagenome; human gut
3073
2979
-
SeC
TCA
[ENA]
¢þ
>WENV182834120
OKEZ01000565
[OKEZ] human gut metagenome; human gut
3139
3215
+
fMet
CAT
[ENA]
¢þ
>WENV182834113
OKEZ01000386
[OKEZ] human gut metagenome; human gut
3151
3237
+
Leu
CAG
[ENA]
¢þ
>WENV182834087
OKEZ01000203
[OKEZ] human gut metagenome; human gut
4666
4590
-
Pro
CGG
[ENA]
¢þ
>WENV182834060
OKEZ01000097
[OKEZ] human gut metagenome; human gut
4726
4802
+
Arg
TCT
[ENA]
¢þ
>WENV182834104
OKEZ01000298
[OKEZ] human gut metagenome; human gut
6267
6178
-
Ser
CGA
[ENA]
¢þ
>WENV182834069
OKEZ01000120
[OKEZ] human gut metagenome; human gut
6600
6511
-
Ser
CGA
[ENA]
¢þ
>WENV182834082
OKEZ01000187
[OKEZ] human gut metagenome; human gut
6635
6562
-
Gln
TTG
[ENA]
¢þ
>WENV182834081
OKEZ01000187
[OKEZ] human gut metagenome; human gut
6725
6643
-
Tyr
GTA
[ENA]
¢þ
>WENV182834103
OKEZ01000297
[OKEZ] human gut metagenome; human gut
6735
6659
-
Asp
GTC
[ENA]
¢þ
>WENV182834066
OKEZ01000120
[OKEZ] human gut metagenome; human gut
7592
7667
+
Asn
GTT
[ENA]
¢þ
>WENV182834115
OKEZ01000394
[OKEZ] human gut metagenome; human gut
7608
7692
+
Leu
CAA
[ENA]
¢þ
>WENV182834116
OKEZ01000405
[OKEZ] human gut metagenome; human gut
7702
7777
+
Ile2
CAT
[ENA]
¢þ
>WENV182834102
OKEZ01000294
[OKEZ] human gut metagenome; human gut
7714
7638
-
Pro
TGG
[ENA]
¢þ
>WENV182834101
OKEZ01000294
[OKEZ] human gut metagenome; human gut
7846
7760
-
Leu
CAG
[ENA]
¢þ
>WENV182834100
OKEZ01000294
[OKEZ] human gut metagenome; human gut
7944
7869
-
His
GTG
[ENA]
¢þ
>WENV182834099
OKEZ01000294
[OKEZ] human gut metagenome; human gut
8076
8000
-
Arg
CCG
[ENA]
¢þ
>WENV182834114
OKEZ01000389
[OKEZ] human gut metagenome; human gut
8307
8393
+
Leu
GAG
[ENA]
¢þ
>WENV182834110
OKEZ01000379
[OKEZ] human gut metagenome; human gut
9838
9911
+
Gly
CCC
[ENA]
¢þ
>WENV182834075
OKEZ01000159
[OKEZ] human gut metagenome; human gut
10285
10360
+
Phe
GAA
[ENA]
¢þ
>WENV182834036
OKEZ01000008
[OKEZ] human gut metagenome; human gut
10707
10782
+
Asn
GTT
[ENA]
¢þ
>WENV182834071
OKEZ01000126
[OKEZ] human gut metagenome; human gut
11498
11574
+
Val
GAC
[ENA]
¢þ
>WENV182834072
OKEZ01000126
[OKEZ] human gut metagenome; human gut
11579
11655
+
Val
GAC
[ENA]
¢þ
>WENV182834053
OKEZ01000085
[OKEZ] human gut metagenome; human gut
11808
11883
+
Gly
GCC
[ENA]
¢þ
>WENV182834054
OKEZ01000085
[OKEZ] human gut metagenome; human gut
11922
11995
+
Cys
GCA
[ENA]
¢þ
>WENV182834055
OKEZ01000085
[OKEZ] human gut metagenome; human gut
12009
12095
+
Leu
TAA
[ENA]
¢þ
>WENV182834064
OKEZ01000106
[OKEZ] human gut metagenome; human gut
13446
13533
+
Ser
TGA
[ENA]
¢þ
>WENV182834073
OKEZ01000128
[OKEZ] human gut metagenome; human gut
17228
17153
-
Arg
CCT
[ENA]
¢þ
>WENV182834080
OKEZ01000187
[OKEZ] human gut metagenome; human gut
18059
17973
-
Leu
GAG
[ENA]
¢þ
>WENV182834062
OKEZ01000100
[OKEZ] human gut metagenome; human gut
18410
18334
-
Pro
GGG
[ENA]
¢þ
>WENV182834076
OKEZ01000183
[OKEZ] human gut metagenome; human gut
21752
21676
-
Pro
GGG
[ENA]
¢þ
>WENV182834086
OKEZ01000195
[OKEZ] human gut metagenome; human gut
22048
21973
-
Asn
GTT
[ENA]
¢þ
>WENV182834052
OKEZ01000077
[OKEZ] human gut metagenome; human gut
22328
22253
-
Asn
GTT
[ENA]
¢þ
>WENV182834085
OKEZ01000190
[OKEZ] human gut metagenome; human gut
23857
23785
-
Arg
CCT
[ENA]
¢þ
>WENV182834051
OKEZ01000077
[OKEZ] human gut metagenome; human gut
24076
24151
+
Asn
GTT
[ENA]
¢þ
>WENV182834077
OKEZ01000186
[OKEZ] human gut metagenome; human gut
24453
24529
+
Met
CAT
[ENA]
¢þ
>WENV182834078
OKEZ01000186
[OKEZ] human gut metagenome; human gut
24538
24622
+
Leu
TAG
[ENA]
¢þ
>WENV182834079
OKEZ01000186
[OKEZ] human gut metagenome; human gut
24657
24731
+
Gln
TTG
[ENA]
¢þ
>WENV182834068
OKEZ01000120
[OKEZ] human gut metagenome; human gut
27982
27907
-
Asn
GTT
[ENA]
¢þ
>WENV182834039
OKEZ01000020
[OKEZ] human gut metagenome; human gut
28555
28483
-
Thr
GGT
[ENA]
¢þ
>WENV182834067
OKEZ01000120
[OKEZ] human gut metagenome; human gut
29760
29835
+
Asn
GTT
[ENA]
¢þ
>WENV182834044
OKEZ01000036
[OKEZ] human gut metagenome; human gut
30408
30483
+
Phe
GAA
[ENA]
¢þ
>WENV182834050
OKEZ01000067
[OKEZ] human gut metagenome; human gut
31042
30955
-
Ser
TGA
[ENA]
¢þ
>WENV182834070
OKEZ01000125
[OKEZ] human gut metagenome; human gut
34043
34117
+
Lys
CTT
[ENA]
¢þ
>WENV182834047
OKEZ01000051
[OKEZ] human gut metagenome; human gut
34483
34570
+
Ser
GGA
[ENA]
¢þ
>WENV182834041
OKEZ01000031
[OKEZ] human gut metagenome; human gut
35835
35741
-
SeC
TCA
[ENA]
¢þ
>WENV182834048
OKEZ01000051
[OKEZ] human gut metagenome; human gut
37641
37728
+
Ser
GGA
[ENA]
¢þ
>WENV182834061
OKEZ01000099
[OKEZ] human gut metagenome; human gut
39288
39361
+
Glu
TTC
[ENA]
¢þ
>WENV182834049
OKEZ01000063
[OKEZ] human gut metagenome; human gut
45733
45805
+
Thr
CGT
[ENA]
¢þ
>WENV182834046
OKEZ01000049
[OKEZ] human gut metagenome; human gut
48218
48142
-
Asp
GTC
[ENA]
¢þ
>WENV182834043
OKEZ01000035
[OKEZ] human gut metagenome; human gut
62163
62088
-
Asn
GTT
[ENA]
¢þ
>WENV182834042
OKEZ01000035
[OKEZ] human gut metagenome; human gut
63154
63243
+
Ser
CGA
[ENA]
¢þ
>WENV182834038
OKEZ01000014
[OKEZ] human gut metagenome; human gut
64722
64648
-
Arg
CCT
[ENA]
¢þ
>WENV182834040
OKEZ01000028
[OKEZ] human gut metagenome; human gut
65957
66041
+
Leu
CAA
[ENA]
¢þ
>WENV182834035
OKEZ01000006
[OKEZ] human gut metagenome; human gut
99836
99912
+
Arg
TCT
[ENA]
¢þ
>WENV182834037
OKEZ01000009
[OKEZ] human gut metagenome; human gut
101558
101650
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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