This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKGP] human gut metagenome; human gut
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182838241
OKGP01002705
[OKGP] human gut metagenome; human gut
82
158
+
Arg
TCT
[ENA]
¢þ
>WENV182838237
OKGP01001848
[OKGP] human gut metagenome; human gut
86
172
+
Leu
CAG
[ENA]
¢þ
>WENV182838245
OKGP01004143
[OKGP] human gut metagenome; human gut
148
73
-
Ala
GGC
[ENA]
¢þ
>WENV182838242
OKGP01002705
[OKGP] human gut metagenome; human gut
163
238
+
His
GTG
[ENA]
¢þ
>WENV182838229
OKGP01000364
[OKGP] human gut metagenome; human gut
223
298
+
Asn
GTT
[ENA]
¢þ
>WENV182838239
OKGP01002072
[OKGP] human gut metagenome; human gut
225
149
-
Pro
CGG
[ENA]
¢þ
>WENV182838228
OKGP01000250
[OKGP] human gut metagenome; human gut
233
319
+
Leu
GAG
[ENA]
¢þ
>WENV182838243
OKGP01002705
[OKGP] human gut metagenome; human gut
244
318
+
Gln
TTG
[ENA]
¢þ
>WENV182838244
OKGP01002705
[OKGP] human gut metagenome; human gut
326
401
+
Lys
TTT
[ENA]
¢þ
>WENV182838232
OKGP01000613
[OKGP] human gut metagenome; human gut
467
542
+
Gly
GCC
[ENA]
¢þ
>WENV182838225
OKGP01000120
[OKGP] human gut metagenome; human gut
483
389
-
SeC
TCA
[ENA]
¢þ
>WENV182838238
OKGP01001949
[OKGP] human gut metagenome; human gut
487
412
-
Ile2
CAT
[ENA]
¢þ
>WENV182838240
OKGP01002287
[OKGP] human gut metagenome; human gut
505
416
-
Ser
CGA
[ENA]
¢þ
>WENV182838230
OKGP01000504
[OKGP] human gut metagenome; human gut
515
590
+
Thr
TGT
[ENA]
¢þ
>WENV182838227
OKGP01000234
[OKGP] human gut metagenome; human gut
532
608
+
fMet
CAT
[ENA]
¢þ
>WENV182838233
OKGP01000613
[OKGP] human gut metagenome; human gut
583
656
+
Cys
GCA
[ENA]
¢þ
>WENV182838231
OKGP01000504
[OKGP] human gut metagenome; human gut
599
683
+
Tyr
GTA
[ENA]
¢þ
>WENV182838234
OKGP01000613
[OKGP] human gut metagenome; human gut
670
756
+
Leu
TAA
[ENA]
¢þ
>WENV182838235
OKGP01001241
[OKGP] human gut metagenome; human gut
706
636
-
Gly
TCC
[ENA]
¢þ
>WENV182838236
OKGP01001263
[OKGP] human gut metagenome; human gut
779
695
-
Leu
CAA
[ENA]
¢þ
>WENV182838226
OKGP01000143
[OKGP] human gut metagenome; human gut
1780
1704
-
Arg
TCT
[ENA]
¢þ
>WENV182838224
OKGP01000072
[OKGP] human gut metagenome; human gut
2315
2390
+
Ala
TGC
[ENA]
¢þ
>WENV182838221
OKGP01000012
[OKGP] human gut metagenome; human gut
2567
2642
+
Glu
TTC
[ENA]
¢þ
>WENV182838222
OKGP01000012
[OKGP] human gut metagenome; human gut
5994
6070
+
Asp
GTC
[ENA]
¢þ
>WENV182838223
OKGP01000012
[OKGP] human gut metagenome; human gut
6124
6199
+
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK