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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKHD] human gut metagenome; human gut
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182839422
OKHD01000369
[OKHD] human gut metagenome; human gut
48
122
+
Arg
TCT
[ENA]
¢þ
>WENV182839339
OKHD01000022
[OKHD] human gut metagenome; human gut
63
147
+
Leu
TAG
[ENA]
¢þ
>WENV182839366
OKHD01000045
[OKHD] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182839378
OKHD01000067
[OKHD] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182839413
OKHD01000123
[OKHD] human gut metagenome; human gut
153
78
-
Val
TAC
[ENA]
¢þ
>WENV182839340
OKHD01000022
[OKHD] human gut metagenome; human gut
171
245
+
Gln
TTG
[ENA]
¢þ
>WENV182839341
OKHD01000022
[OKHD] human gut metagenome; human gut
263
339
+
Met
CAT
[ENA]
¢þ
>WENV182839342
OKHD01000022
[OKHD] human gut metagenome; human gut
381
455
+
Gln
CTG
[ENA]
¢þ
>WENV182839343
OKHD01000022
[OKHD] human gut metagenome; human gut
490
564
+
Gln
CTG
[ENA]
¢þ
>WENV182839387
OKHD01000075
[OKHD] human gut metagenome; human gut
726
651
-
Phe
GAA
[ENA]
¢þ
>WENV182839346
OKHD01000025
[OKHD] human gut metagenome; human gut
1778
1694
-
Tyr
GTA
[ENA]
¢þ
>WENV182839402
OKHD01000122
[OKHD] human gut metagenome; human gut
2036
2121
+
Ser
GGA
[ENA]
¢þ
>WENV182839328
OKHD01000014
[OKHD] human gut metagenome; human gut
3014
3101
+
Ser
GGA
[ENA]
¢þ
>WENV182839401
OKHD01000120
[OKHD] human gut metagenome; human gut
3076
3149
+
Ala
GGC
[ENA]
¢þ
>WENV182839379
OKHD01000068
[OKHD] human gut metagenome; human gut
3953
4026
+
Ala
CGC
[ENA]
¢þ
>WENV182839400
OKHD01000109
[OKHD] human gut metagenome; human gut
4316
4233
-
Leu
TAG
[ENA]
¢þ
>WENV182839412
OKHD01000123
[OKHD] human gut metagenome; human gut
5280
5205
-
Ala
TGC
[ENA]
¢þ
>WENV182839411
OKHD01000123
[OKHD] human gut metagenome; human gut
5368
5294
-
Pro
TGG
[ENA]
¢þ
>WENV182839410
OKHD01000123
[OKHD] human gut metagenome; human gut
5471
5395
-
Arg
ACG
[ENA]
¢þ
>WENV182839409
OKHD01000123
[OKHD] human gut metagenome; human gut
5572
5484
-
Leu
TAA
[ENA]
¢þ
>WENV182839408
OKHD01000123
[OKHD] human gut metagenome; human gut
5658
5584
-
Gly
GCC
[ENA]
¢þ
>WENV182839407
OKHD01000123
[OKHD] human gut metagenome; human gut
5744
5662
-
Leu
TAG
[ENA]
¢þ
>WENV182839406
OKHD01000123
[OKHD] human gut metagenome; human gut
5828
5753
-
Lys
TTT
[ENA]
¢þ
>WENV182839405
OKHD01000123
[OKHD] human gut metagenome; human gut
5910
5835
-
Thr
TGT
[ENA]
¢þ
>WENV182839404
OKHD01000123
[OKHD] human gut metagenome; human gut
5992
5917
-
Val
TAC
[ENA]
¢þ
>WENV182839403
OKHD01000123
[OKHD] human gut metagenome; human gut
6070
5999
-
Glu
TTC
[ENA]
¢þ
>WENV182839419
OKHD01000156
[OKHD] human gut metagenome; human gut
6111
6203
+
Ser
TGA
[ENA]
¢þ
>WENV182839420
OKHD01000156
[OKHD] human gut metagenome; human gut
6215
6288
+
fMet
CAT
[ENA]
¢þ
>WENV182839421
OKHD01000156
[OKHD] human gut metagenome; human gut
6392
6466
+
Phe
GAA
[ENA]
¢þ
>WENV182839418
OKHD01000129
[OKHD] human gut metagenome; human gut
6600
6525
-
Phe
GAA
[ENA]
¢þ
>WENV182839417
OKHD01000129
[OKHD] human gut metagenome; human gut
6735
6661
-
Asp
GTC
[ENA]
¢þ
>WENV182839416
OKHD01000129
[OKHD] human gut metagenome; human gut
7221
7147
-
Glu
TTC
[ENA]
¢þ
>WENV182839414
OKHD01000128
[OKHD] human gut metagenome; human gut
7632
7557
-
Pro
TGG
[ENA]
¢þ
>WENV182839312
OKHD01000007
[OKHD] human gut metagenome; human gut
8336
8418
+
Tyr
GTA
[ENA]
¢þ
>WENV182839313
OKHD01000007
[OKHD] human gut metagenome; human gut
8619
8692
+
Thr
GGT
[ENA]
¢þ
>WENV182839314
OKHD01000007
[OKHD] human gut metagenome; human gut
8757
8831
+
Met
CAT
[ENA]
¢þ
>WENV182839415
OKHD01000129
[OKHD] human gut metagenome; human gut
9034
9108
+
Lys
TTT
[ENA]
¢þ
>WENV182839399
OKHD01000109
[OKHD] human gut metagenome; human gut
9252
9178
-
Lys
CTT
[ENA]
¢þ
>WENV182839372
OKHD01000049
[OKHD] human gut metagenome; human gut
9936
9863
-
Gly
TCC
[ENA]
¢þ
>WENV182839380
OKHD01000068
[OKHD] human gut metagenome; human gut
10620
10539
-
Tyr
GTA
[ENA]
¢þ
>WENV182839388
OKHD01000076
[OKHD] human gut metagenome; human gut
11745
11824
+
Gln
TTG
[ENA]
¢þ
>WENV182839398
OKHD01000108
[OKHD] human gut metagenome; human gut
11843
11918
+
Phe
GAA
[ENA]
¢þ
>WENV182839315
OKHD01000007
[OKHD] human gut metagenome; human gut
12823
12896
+
Trp
CCA
[ENA]
¢þ
>WENV182839333
OKHD01000017
[OKHD] human gut metagenome; human gut
13206
13131
-
Asn
GTT
[ENA]
¢þ
>WENV182839327
OKHD01000012
[OKHD] human gut metagenome; human gut
13826
13750
-
fMet
CAT
[ENA]
¢þ
>WENV182839344
OKHD01000023
[OKHD] human gut metagenome; human gut
14414
14488
+
Ala
TGC
[ENA]
¢þ
>WENV182839332
OKHD01000017
[OKHD] human gut metagenome; human gut
14955
15030
+
Asn
GTT
[ENA]
¢þ
>WENV182839326
OKHD01000012
[OKHD] human gut metagenome; human gut
15733
15647
-
Leu
GAG
[ENA]
¢þ
>WENV182839373
OKHD01000050
[OKHD] human gut metagenome; human gut
16015
16088
+
Asn
GTT
[ENA]
¢þ
>WENV182839345
OKHD01000024
[OKHD] human gut metagenome; human gut
16589
16514
-
Thr
TGT
[ENA]
¢þ
>WENV182839397
OKHD01000101
[OKHD] human gut metagenome; human gut
17532
17616
+
Leu
CAA
[ENA]
¢þ
>WENV182839362
OKHD01000043
[OKHD] human gut metagenome; human gut
18075
18002
-
Thr
CGT
[ENA]
¢þ
>WENV182839381
OKHD01000069
[OKHD] human gut metagenome; human gut
18489
18561
+
Arg
CCT
[ENA]
¢þ
>WENV182839311
OKHD01000005
[OKHD] human gut metagenome; human gut
19235
19322
+
Leu
GAG
[ENA]
¢þ
>WENV182839390
OKHD01000081
[OKHD] human gut metagenome; human gut
19551
19626
+
Asn
GTT
[ENA]
¢þ
>WENV182839392
OKHD01000092
[OKHD] human gut metagenome; human gut
21523
21450
-
Arg
CCT
[ENA]
¢þ
>WENV182839377
OKHD01000065
[OKHD] human gut metagenome; human gut
23210
23282
+
Arg
CCG
[ENA]
¢þ
>WENV182839396
OKHD01000095
[OKHD] human gut metagenome; human gut
23878
23802
-
Arg
ACG
[ENA]
¢þ
>WENV182839395
OKHD01000095
[OKHD] human gut metagenome; human gut
24019
23943
-
Arg
ACG
[ENA]
¢þ
>WENV182839394
OKHD01000095
[OKHD] human gut metagenome; human gut
24160
24084
-
Arg
ACG
[ENA]
¢þ
>WENV182839393
OKHD01000095
[OKHD] human gut metagenome; human gut
24301
24225
-
Arg
ACG
[ENA]
¢þ
>WENV182839374
OKHD01000050
[OKHD] human gut metagenome; human gut
28518
28592
+
Ile2
CAT
[ENA]
¢þ
>WENV182839386
OKHD01000072
[OKHD] human gut metagenome; human gut
29340
29265
-
Arg
TCT
[ENA]
¢þ
>WENV182839391
OKHD01000081
[OKHD] human gut metagenome; human gut
30496
30571
+
Asn
GTT
[ENA]
¢þ
>WENV182839389
OKHD01000076
[OKHD] human gut metagenome; human gut
30981
31055
+
Leu
TAA
[ENA]
¢þ
>WENV182839385
OKHD01000072
[OKHD] human gut metagenome; human gut
31407
31482
+
His
GTG
[ENA]
¢þ
>WENV182839352
OKHD01000034
[OKHD] human gut metagenome; human gut
31759
31835
+
Arg
CCG
[ENA]
¢þ
>WENV182839353
OKHD01000034
[OKHD] human gut metagenome; human gut
31903
31978
+
His
GTG
[ENA]
¢þ
>WENV182839330
OKHD01000014
[OKHD] human gut metagenome; human gut
31940
31853
-
Ser
TGA
[ENA]
¢þ
>WENV182839354
OKHD01000034
[OKHD] human gut metagenome; human gut
32000
32086
+
Leu
CAG
[ENA]
¢þ
>WENV182839355
OKHD01000034
[OKHD] human gut metagenome; human gut
32131
32207
+
Pro
TGG
[ENA]
¢þ
>WENV182839363
OKHD01000044
[OKHD] human gut metagenome; human gut
32151
32223
+
Gln
CTG
[ENA]
¢þ
>WENV182839364
OKHD01000044
[OKHD] human gut metagenome; human gut
32359
32434
+
Glu
CTC
[ENA]
¢þ
>WENV182839384
OKHD01000070
[OKHD] human gut metagenome; human gut
36104
36029
-
Thr
CGT
[ENA]
¢þ
>WENV182839375
OKHD01000054
[OKHD] human gut metagenome; human gut
36691
36764
+
Gly
CCC
[ENA]
¢þ
>WENV182839383
OKHD01000069
[OKHD] human gut metagenome; human gut
36784
36709
-
Ala
GGC
[ENA]
¢þ
>WENV182839382
OKHD01000069
[OKHD] human gut metagenome; human gut
36901
36826
-
Ala
GGC
[ENA]
¢þ
>WENV182839329
OKHD01000014
[OKHD] human gut metagenome; human gut
37482
37395
-
Ser
TGA
[ENA]
¢þ
>WENV182839316
OKHD01000008
[OKHD] human gut metagenome; human gut
38141
38224
+
Leu
CAG
[ENA]
¢þ
>WENV182839367
OKHD01000048
[OKHD] human gut metagenome; human gut
41190
41266
+
Pro
TGG
[ENA]
¢þ
>WENV182839365
OKHD01000044
[OKHD] human gut metagenome; human gut
42026
41952
-
Val
TAC
[ENA]
¢þ
>WENV182839334
OKHD01000018
[OKHD] human gut metagenome; human gut
43460
43376
-
Leu
CAA
[ENA]
¢þ
>WENV182839359
OKHD01000040
[OKHD] human gut metagenome; human gut
43665
43591
-
Ile
GAT
[ENA]
¢þ
>WENV182839376
OKHD01000055
[OKHD] human gut metagenome; human gut
44471
44547
+
Pro
GGG
[ENA]
¢þ
>WENV182839307
OKHD01000001
[OKHD] human gut metagenome; human gut
45170
45245
+
Gly
GCC
[ENA]
¢þ
>WENV182839308
OKHD01000001
[OKHD] human gut metagenome; human gut
45297
45370
+
Cys
GCA
[ENA]
¢þ
>WENV182839309
OKHD01000001
[OKHD] human gut metagenome; human gut
45382
45468
+
Leu
TAA
[ENA]
¢þ
>WENV182839361
OKHD01000043
[OKHD] human gut metagenome; human gut
47579
47503
-
Asp
GTC
[ENA]
¢þ
>WENV182839368
OKHD01000048
[OKHD] human gut metagenome; human gut
48904
48979
+
Thr
TGT
[ENA]
¢þ
>WENV182839369
OKHD01000048
[OKHD] human gut metagenome; human gut
48988
49072
+
Tyr
GTA
[ENA]
¢þ
>WENV182839370
OKHD01000048
[OKHD] human gut metagenome; human gut
49189
49263
+
Gly
TCC
[ENA]
¢þ
>WENV182839371
OKHD01000048
[OKHD] human gut metagenome; human gut
49270
49345
+
Thr
GGT
[ENA]
¢þ
>WENV182839317
OKHD01000008
[OKHD] human gut metagenome; human gut
52518
52594
+
Pro
CGG
[ENA]
¢þ
>WENV182839338
OKHD01000019
[OKHD] human gut metagenome; human gut
53592
53520
-
Val
GAC
[ENA]
¢þ
>WENV182839337
OKHD01000019
[OKHD] human gut metagenome; human gut
53664
53593
-
Cys
GCA
[ENA]
¢þ
>WENV182839336
OKHD01000019
[OKHD] human gut metagenome; human gut
53765
53692
-
Gly
GCC
[ENA]
¢þ
>WENV182839335
OKHD01000019
[OKHD] human gut metagenome; human gut
54144
54218
+
Val
CAC
[ENA]
¢þ
>WENV182839348
OKHD01000030
[OKHD] human gut metagenome; human gut
56709
56783
+
Pro
GGG
[ENA]
¢þ
>WENV182839360
OKHD01000043
[OKHD] human gut metagenome; human gut
57013
56937
-
Asp
GTC
[ENA]
¢þ
>WENV182839357
OKHD01000037
[OKHD] human gut metagenome; human gut
57143
57219
+
Arg
TCT
[ENA]
¢þ
>WENV182839325
OKHD01000010
[OKHD] human gut metagenome; human gut
63928
63852
-
fMet
CAT
[ENA]
¢þ
>WENV182839324
OKHD01000009
[OKHD] human gut metagenome; human gut
64833
64758
-
Arg
TCT
[ENA]
¢þ
>WENV182839358
OKHD01000038
[OKHD] human gut metagenome; human gut
65071
64977
-
SeC
TCA
[ENA]
¢þ
>WENV182839356
OKHD01000036
[OKHD] human gut metagenome; human gut
69372
69448
+
Met
CAT
[ENA]
¢þ
>WENV182839331
OKHD01000015
[OKHD] human gut metagenome; human gut
69682
69757
+
Ile2
CAT
[ENA]
¢þ
>WENV182839347
OKHD01000028
[OKHD] human gut metagenome; human gut
71249
71322
+
Gly
CCC
[ENA]
¢þ
>WENV182839349
OKHD01000031
[OKHD] human gut metagenome; human gut
71720
71644
-
fMet
CAT
[ENA]
¢þ
>WENV182839351
OKHD01000032
[OKHD] human gut metagenome; human gut
75151
75065
-
Leu
CAG
[ENA]
¢þ
>WENV182839350
OKHD01000032
[OKHD] human gut metagenome; human gut
75269
75184
-
Leu
CAG
[ENA]
¢þ
>WENV182839321
OKHD01000008
[OKHD] human gut metagenome; human gut
80435
80348
-
Ser
CGA
[ENA]
¢þ
>WENV182839320
OKHD01000008
[OKHD] human gut metagenome; human gut
88689
88616
-
Arg
ACG
[ENA]
¢þ
>WENV182839319
OKHD01000008
[OKHD] human gut metagenome; human gut
89009
88919
-
Ser
GCT
[ENA]
¢þ
>WENV182839318
OKHD01000008
[OKHD] human gut metagenome; human gut
96340
96255
-
Ser
TGA
[ENA]
¢þ
>WENV182839310
OKHD01000001
[OKHD] human gut metagenome; human gut
113851
113927
+
Arg
TCT
[ENA]
¢þ
>WENV182839322
OKHD01000009
[OKHD] human gut metagenome; human gut
128729
128805
+
Val
GAC
[ENA]
¢þ
>WENV182839323
OKHD01000009
[OKHD] human gut metagenome; human gut
128810
128886
+
Val
GAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK