This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKID] human gut metagenome; human gut
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182842247
OKID01000020
[OKID] human gut metagenome; human gut
88
172
+
Tyr
GTA
[ENA]
¢þ
>WENV182842337
OKID01000402
[OKID] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182842239
OKID01000011
[OKID] human gut metagenome; human gut
106
182
+
Asp
GTC
[ENA]
¢þ
>WENV182842346
OKID01000647
[OKID] human gut metagenome; human gut
117
47
-
Gly
TCC
[ENA]
¢þ
>WENV182842234
OKID01000006
[OKID] human gut metagenome; human gut
133
59
-
Gly
TCC
[ENA]
¢þ
>WENV182842246
OKID01000019
[OKID] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182842335
OKID01000266
[OKID] human gut metagenome; human gut
252
176
-
Arg
ACG
[ENA]
¢þ
>WENV182842332
OKID01000231
[OKID] human gut metagenome; human gut
281
207
-
Glu
CTC
[ENA]
¢þ
>WENV182842345
OKID01000647
[OKID] human gut metagenome; human gut
290
215
-
Asp
GTC
[ENA]
¢þ
>WENV182842233
OKID01000006
[OKID] human gut metagenome; human gut
334
250
-
Tyr
GTA
[ENA]
¢þ
>WENV182842306
OKID01000100
[OKID] human gut metagenome; human gut
356
280
-
Arg
TCT
[ENA]
¢þ
>WENV182842344
OKID01000647
[OKID] human gut metagenome; human gut
374
300
-
Val
TAC
[ENA]
¢þ
>WENV182842322
OKID01000159
[OKID] human gut metagenome; human gut
392
316
-
Ile
GAT
[ENA]
¢þ
>WENV182842232
OKID01000006
[OKID] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¢þ
>WENV182842336
OKID01000296
[OKID] human gut metagenome; human gut
432
507
+
Thr
TGT
[ENA]
¢þ
>WENV182842305
OKID01000100
[OKID] human gut metagenome; human gut
472
396
-
Pro
TGG
[ENA]
¢þ
>WENV182842343
OKID01000647
[OKID] human gut metagenome; human gut
473
400
-
Glu
TTC
[ENA]
¢þ
>WENV182842321
OKID01000159
[OKID] human gut metagenome; human gut
490
415
-
Ala
TGC
[ENA]
¢þ
>WENV182842342
OKID01000647
[OKID] human gut metagenome; human gut
548
474
-
Asn
GTT
[ENA]
¢þ
>WENV182842338
OKID01000416
[OKID] human gut metagenome; human gut
1462
1554
+
Ser
GGA
[ENA]
¢þ
>WENV182842331
OKID01000224
[OKID] human gut metagenome; human gut
1481
1557
+
Pro
GGG
[ENA]
¢þ
>WENV182842341
OKID01000487
[OKID] human gut metagenome; human gut
2119
2194
+
Val
TAC
[ENA]
¢þ
>WENV182842255
OKID01000035
[OKID] human gut metagenome; human gut
2120
2196
+
His
GTG
[ENA]
¢þ
>WENV182842340
OKID01000478
[OKID] human gut metagenome; human gut
2199
2124
-
Ala
TGC
[ENA]
¢þ
>WENV182842339
OKID01000478
[OKID] human gut metagenome; human gut
2381
2305
-
Ile
GAT
[ENA]
¢þ
>WENV182842272
OKID01000043
[OKID] human gut metagenome; human gut
2554
2640
+
Leu
GAG
[ENA]
¢þ
>WENV182842320
OKID01000149
[OKID] human gut metagenome; human gut
3279
3203
-
fMet
CAT
[ENA]
¢þ
>WENV182842319
OKID01000149
[OKID] human gut metagenome; human gut
3438
3362
-
fMet
CAT
[ENA]
¢þ
>WENV182842333
OKID01000236
[OKID] human gut metagenome; human gut
3796
3712
-
Leu
CAG
[ENA]
¢þ
>WENV182842251
OKID01000030
[OKID] human gut metagenome; human gut
4152
4076
-
Arg
CCT
[ENA]
¢þ
>WENV182842334
OKID01000245
[OKID] human gut metagenome; human gut
4235
4310
+
Phe
GAA
[ENA]
¢þ
>WENV182842273
OKID01000043
[OKID] human gut metagenome; human gut
4461
4537
+
fMet
CAT
[ENA]
¢þ
>WENV182842330
OKID01000210
[OKID] human gut metagenome; human gut
4675
4599
-
Asn
GTT
[ENA]
¢þ
>WENV182842324
OKID01000161
[OKID] human gut metagenome; human gut
5173
5256
+
Leu
CAA
[ENA]
¢þ
>WENV182842278
OKID01000058
[OKID] human gut metagenome; human gut
5184
5273
+
Ser
TGA
[ENA]
¢þ
>WENV182842276
OKID01000056
[OKID] human gut metagenome; human gut
5835
5911
+
Met
CAT
[ENA]
¢þ
>WENV182842277
OKID01000056
[OKID] human gut metagenome; human gut
5967
6041
+
Gln
CTG
[ENA]
¢þ
>WENV182842325
OKID01000187
[OKID] human gut metagenome; human gut
6106
6179
+
Gly
CCC
[ENA]
¢þ
>WENV182842292
OKID01000064
[OKID] human gut metagenome; human gut
6567
6653
+
Leu
TAA
[ENA]
¢þ
>WENV182842317
OKID01000127
[OKID] human gut metagenome; human gut
6717
6792
+
Arg
TCT
[ENA]
¢þ
>WENV182842327
OKID01000194
[OKID] human gut metagenome; human gut
7193
7268
+
Ala
CGC
[ENA]
¢þ
>WENV182842249
OKID01000024
[OKID] human gut metagenome; human gut
7688
7763
+
Ile2
CAT
[ENA]
¢þ
>WENV182842231
OKID01000006
[OKID] human gut metagenome; human gut
8131
8055
-
Pro
TGG
[ENA]
¢þ
>WENV182842301
OKID01000093
[OKID] human gut metagenome; human gut
8328
8404
+
Pro
CGG
[ENA]
¢þ
>WENV182842326
OKID01000187
[OKID] human gut metagenome; human gut
8362
8436
+
Gly
GCC
[ENA]
¢þ
>WENV182842302
OKID01000093
[OKID] human gut metagenome; human gut
8545
8621
+
Pro
CGG
[ENA]
¢þ
>WENV182842323
OKID01000160
[OKID] human gut metagenome; human gut
8933
9008
+
Lys
TTT
[ENA]
¢þ
>WENV182842250
OKID01000028
[OKID] human gut metagenome; human gut
9416
9491
+
Thr
CGT
[ENA]
¢þ
>WENV182842240
OKID01000011
[OKID] human gut metagenome; human gut
9540
9616
+
Asp
GTC
[ENA]
¢þ
>WENV182842316
OKID01000121
[OKID] human gut metagenome; human gut
9614
9519
-
SeC
TCA
[ENA]
¢þ
>WENV182842315
OKID01000113
[OKID] human gut metagenome; human gut
10257
10172
-
Leu
CAA
[ENA]
¢þ
>WENV182842307
OKID01000101
[OKID] human gut metagenome; human gut
10398
10472
+
Val
CAC
[ENA]
¢þ
>WENV182842328
OKID01000194
[OKID] human gut metagenome; human gut
11325
11400
+
Phe
GAA
[ENA]
¢þ
>WENV182842329
OKID01000194
[OKID] human gut metagenome; human gut
11472
11547
+
Phe
GAA
[ENA]
¢þ
>WENV182842256
OKID01000035
[OKID] human gut metagenome; human gut
11694
11769
+
Lys
CTT
[ENA]
¢þ
>WENV182842226
OKID01000005
[OKID] human gut metagenome; human gut
11882
11976
+
SeC
TCA
[ENA]
¢þ
>WENV182842298
OKID01000080
[OKID] human gut metagenome; human gut
11955
12047
+
Ser
GCT
[ENA]
¢þ
>WENV182842257
OKID01000035
[OKID] human gut metagenome; human gut
11968
12043
+
Lys
CTT
[ENA]
¢þ
>WENV182842275
OKID01000050
[OKID] human gut metagenome; human gut
12212
12137
-
Thr
TGT
[ENA]
¢þ
>WENV182842314
OKID01000113
[OKID] human gut metagenome; human gut
12560
12485
-
Glu
TTC
[ENA]
¢þ
>WENV182842313
OKID01000113
[OKID] human gut metagenome; human gut
12690
12615
-
Ala
GGC
[ENA]
¢þ
>WENV182842312
OKID01000113
[OKID] human gut metagenome; human gut
12810
12735
-
Glu
TTC
[ENA]
¢þ
>WENV182842311
OKID01000113
[OKID] human gut metagenome; human gut
12940
12865
-
Ala
GGC
[ENA]
¢þ
>WENV182842258
OKID01000035
[OKID] human gut metagenome; human gut
12971
13055
+
Leu
TAG
[ENA]
¢þ
>WENV182842310
OKID01000113
[OKID] human gut metagenome; human gut
13200
13125
-
Glu
TTC
[ENA]
¢þ
>WENV182842309
OKID01000113
[OKID] human gut metagenome; human gut
13330
13255
-
Ala
GGC
[ENA]
¢þ
>WENV182842303
OKID01000098
[OKID] human gut metagenome; human gut
13975
14051
+
Asn
GTT
[ENA]
¢þ
>WENV182842254
OKID01000031
[OKID] human gut metagenome; human gut
16946
16860
-
Leu
CAG
[ENA]
¢þ
>WENV182842253
OKID01000031
[OKID] human gut metagenome; human gut
17064
16979
-
Leu
CAG
[ENA]
¢þ
>WENV182842252
OKID01000031
[OKID] human gut metagenome; human gut
17179
17093
-
Leu
CAG
[ENA]
¢þ
>WENV182842318
OKID01000149
[OKID] human gut metagenome; human gut
18686
18602
-
Leu
GAG
[ENA]
¢þ
>WENV182842259
OKID01000035
[OKID] human gut metagenome; human gut
19757
19831
+
Val
TAC
[ENA]
¢þ
>WENV182842260
OKID01000035
[OKID] human gut metagenome; human gut
19858
19934
+
Asp
GTC
[ENA]
¢þ
>WENV182842300
OKID01000087
[OKID] human gut metagenome; human gut
20279
20355
+
Arg
TCT
[ENA]
¢þ
>WENV182842289
OKID01000063
[OKID] human gut metagenome; human gut
20598
20670
+
Arg
CCT
[ENA]
¢þ
>WENV182842304
OKID01000098
[OKID] human gut metagenome; human gut
22190
22264
+
Val
GAC
[ENA]
¢þ
>WENV182842299
OKID01000083
[OKID] human gut metagenome; human gut
22603
22527
-
Arg
CCG
[ENA]
¢þ
>WENV182842285
OKID01000059
[OKID] human gut metagenome; human gut
22873
22799
-
Gln
CTG
[ENA]
¢þ
>WENV182842288
OKID01000062
[OKID] human gut metagenome; human gut
22914
22838
-
fMet
CAT
[ENA]
¢þ
>WENV182842284
OKID01000059
[OKID] human gut metagenome; human gut
22982
22908
-
Gln
CTG
[ENA]
¢þ
>WENV182842287
OKID01000062
[OKID] human gut metagenome; human gut
23035
22959
-
fMet
CAT
[ENA]
¢þ
>WENV182842283
OKID01000059
[OKID] human gut metagenome; human gut
23100
23024
-
Met
CAT
[ENA]
¢þ
>WENV182842286
OKID01000062
[OKID] human gut metagenome; human gut
23156
23080
-
fMet
CAT
[ENA]
¢þ
>WENV182842282
OKID01000059
[OKID] human gut metagenome; human gut
23192
23118
-
Gln
TTG
[ENA]
¢þ
>WENV182842281
OKID01000059
[OKID] human gut metagenome; human gut
23299
23225
-
Gln
TTG
[ENA]
¢þ
>WENV182842280
OKID01000059
[OKID] human gut metagenome; human gut
23407
23323
-
Leu
TAG
[ENA]
¢þ
>WENV182842279
OKID01000059
[OKID] human gut metagenome; human gut
23492
23416
-
Met
CAT
[ENA]
¢þ
>WENV182842297
OKID01000064
[OKID] human gut metagenome; human gut
24371
24298
-
Cys
GCA
[ENA]
¢þ
>WENV182842296
OKID01000064
[OKID] human gut metagenome; human gut
24513
24438
-
Gly
GCC
[ENA]
¢þ
>WENV182842295
OKID01000064
[OKID] human gut metagenome; human gut
24731
24656
-
Gly
GCC
[ENA]
¢þ
>WENV182842308
OKID01000102
[OKID] human gut metagenome; human gut
26427
26352
-
Lys
TTT
[ENA]
¢þ
>WENV182842261
OKID01000035
[OKID] human gut metagenome; human gut
27016
27106
+
Ser
CGA
[ENA]
¢þ
>WENV182842294
OKID01000064
[OKID] human gut metagenome; human gut
30132
30057
-
Gly
GCC
[ENA]
¢þ
>WENV182842269
OKID01000037
[OKID] human gut metagenome; human gut
31341
31255
-
Leu
TAA
[ENA]
¢þ
>WENV182842268
OKID01000037
[OKID] human gut metagenome; human gut
31426
31353
-
Cys
GCA
[ENA]
¢þ
>WENV182842267
OKID01000037
[OKID] human gut metagenome; human gut
31553
31478
-
Gly
GCC
[ENA]
¢þ
>WENV182842293
OKID01000064
[OKID] human gut metagenome; human gut
33405
33330
-
Gly
GCC
[ENA]
¢þ
>WENV182842266
OKID01000036
[OKID] human gut metagenome; human gut
35007
34932
-
Trp
CCA
[ENA]
¢þ
>WENV182842265
OKID01000036
[OKID] human gut metagenome; human gut
36417
36342
-
Thr
GGT
[ENA]
¢þ
>WENV182842264
OKID01000036
[OKID] human gut metagenome; human gut
36540
36467
-
Gly
TCC
[ENA]
¢þ
>WENV182842263
OKID01000036
[OKID] human gut metagenome; human gut
36650
36565
-
Tyr
GTA
[ENA]
¢þ
>WENV182842274
OKID01000044
[OKID] human gut metagenome; human gut
38391
38466
+
Ile2
CAT
[ENA]
¢þ
>WENV182842291
OKID01000063
[OKID] human gut metagenome; human gut
38893
38818
-
Ala
GGC
[ENA]
¢þ
>WENV182842290
OKID01000063
[OKID] human gut metagenome; human gut
39010
38935
-
Ala
GGC
[ENA]
¢þ
>WENV182842241
OKID01000011
[OKID] human gut metagenome; human gut
39045
39120
+
Thr
CGT
[ENA]
¢þ
>WENV182842243
OKID01000015
[OKID] human gut metagenome; human gut
40728
40804
+
Val
GAC
[ENA]
¢þ
>WENV182842244
OKID01000015
[OKID] human gut metagenome; human gut
40809
40885
+
Val
GAC
[ENA]
¢þ
>WENV182842218
OKID01000001
[OKID] human gut metagenome; human gut
41079
41166
+
Ser
TGA
[ENA]
¢þ
>WENV182842235
OKID01000008
[OKID] human gut metagenome; human gut
44750
44825
+
Asn
GTT
[ENA]
¢þ
>WENV182842262
OKID01000036
[OKID] human gut metagenome; human gut
46190
46114
-
Gln
TTG
[ENA]
¢þ
>WENV182842248
OKID01000022
[OKID] human gut metagenome; human gut
46436
46512
+
Pro
GGG
[ENA]
¢þ
>WENV182842219
OKID01000001
[OKID] human gut metagenome; human gut
46621
46708
+
Ser
TGA
[ENA]
¢þ
>WENV182842245
OKID01000017
[OKID] human gut metagenome; human gut
50572
50499
-
Gly
CCC
[ENA]
¢þ
>WENV182842271
OKID01000039
[OKID] human gut metagenome; human gut
50886
50810
-
Arg
ACG
[ENA]
¢þ
>WENV182842270
OKID01000039
[OKID] human gut metagenome; human gut
51027
50951
-
Arg
ACG
[ENA]
¢þ
>WENV182842236
OKID01000008
[OKID] human gut metagenome; human gut
55694
55769
+
Asn
GTT
[ENA]
¢þ
>WENV182842230
OKID01000006
[OKID] human gut metagenome; human gut
64510
64434
-
Pro
TGG
[ENA]
¢þ
>WENV182842229
OKID01000006
[OKID] human gut metagenome; human gut
64641
64555
-
Leu
CAG
[ENA]
¢þ
>WENV182842228
OKID01000006
[OKID] human gut metagenome; human gut
64738
64663
-
His
GTG
[ENA]
¢þ
>WENV182842227
OKID01000006
[OKID] human gut metagenome; human gut
64882
64806
-
Arg
CCG
[ENA]
¢þ
>WENV182842238
OKID01000008
[OKID] human gut metagenome; human gut
69537
69462
-
Asn
GTT
[ENA]
¢þ
>WENV182842237
OKID01000008
[OKID] human gut metagenome; human gut
71286
71361
+
Asn
GTT
[ENA]
¢þ
>WENV182842221
OKID01000001
[OKID] human gut metagenome; human gut
79712
79625
-
Ser
GGA
[ENA]
¢þ
>WENV182842220
OKID01000001
[OKID] human gut metagenome; human gut
82630
82543
-
Ser
GGA
[ENA]
¢þ
>WENV182842242
OKID01000013
[OKID] human gut metagenome; human gut
94743
94827
+
Tyr
GTA
[ENA]
¢þ
>WENV182842225
OKID01000002
[OKID] human gut metagenome; human gut
115036
114961
-
Gly
GCC
[ENA]
¢þ
>WENV182842224
OKID01000002
[OKID] human gut metagenome; human gut
115157
115082
-
Gly
GCC
[ENA]
¢þ
>WENV182842223
OKID01000002
[OKID] human gut metagenome; human gut
115278
115203
-
Gly
GCC
[ENA]
¢þ
>WENV182842222
OKID01000002
[OKID] human gut metagenome; human gut
148501
148576
+
Phe
GAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK