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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKJI] human gut metagenome; human gut
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846035
OKJI01002866
[OKJI] human gut metagenome; human gut
59
134
+
His
GTG
[ENA]
¢þ
>WENV182846029
OKJI01000981
[OKJI] human gut metagenome; human gut
59
143
+
Tyr
GTA
[ENA]
¢þ
>WENV182846033
OKJI01001357
[OKJI] human gut metagenome; human gut
60
135
+
Lys
CTT
[ENA]
¢þ
>WENV182846030
OKJI01001099
[OKJI] human gut metagenome; human gut
64
139
+
Phe
GAA
[ENA]
¢þ
>WENV182846004
OKJI01000283
[OKJI] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182846036
OKJI01002866
[OKJI] human gut metagenome; human gut
140
214
+
Gln
TTG
[ENA]
¢þ
>WENV182846031
OKJI01001099
[OKJI] human gut metagenome; human gut
145
215
+
Cys
GCA
[ENA]
¢þ
>WENV182846005
OKJI01000283
[OKJI] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182846027
OKJI01000719
[OKJI] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¢þ
>WENV182846043
OKJI01003430
[OKJI] human gut metagenome; human gut
167
242
+
fMet
CAT
[ENA]
¢þ
>WENV182846034
OKJI01001833
[OKJI] human gut metagenome; human gut
188
113
-
Thr
GGT
[ENA]
¢þ
>WENV182846023
OKJI01000537
[OKJI] human gut metagenome; human gut
206
280
+
Val
CAC
[ENA]
¢þ
>WENV182845980
OKJI01000095
[OKJI] human gut metagenome; human gut
218
146
-
Gln
CTG
[ENA]
¢þ
>WENV182846037
OKJI01002866
[OKJI] human gut metagenome; human gut
218
293
+
Lys
TTT
[ENA]
¢þ
>WENV182846032
OKJI01001099
[OKJI] human gut metagenome; human gut
228
313
+
Leu
CAA
[ENA]
¢þ
>WENV182846006
OKJI01000283
[OKJI] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182846026
OKJI01000719
[OKJI] human gut metagenome; human gut
252
178
-
Asn
GTT
[ENA]
¢þ
>WENV182846038
OKJI01002866
[OKJI] human gut metagenome; human gut
298
381
+
Leu
TAG
[ENA]
¢þ
>WENV182845991
OKJI01000164
[OKJI] human gut metagenome; human gut
305
379
+
Glu
CTC
[ENA]
¢þ
>WENV182846007
OKJI01000283
[OKJI] human gut metagenome; human gut
324
396
+
Thr
TGT
[ENA]
¢þ
>WENV182846039
OKJI01002866
[OKJI] human gut metagenome; human gut
385
459
+
Gly
GCC
[ENA]
¢þ
>WENV182846008
OKJI01000283
[OKJI] human gut metagenome; human gut
408
479
+
Gly
GCC
[ENA]
¢þ
>WENV182846025
OKJI01000680
[OKJI] human gut metagenome; human gut
458
376
-
Leu
CAA
[ENA]
¢þ
>WENV182846040
OKJI01002866
[OKJI] human gut metagenome; human gut
466
539
+
Gly
TCC
[ENA]
¢þ
>WENV182846009
OKJI01000283
[OKJI] human gut metagenome; human gut
495
580
+
Leu
TAA
[ENA]
¢þ
>WENV182846042
OKJI01003144
[OKJI] human gut metagenome; human gut
547
476
-
Arg
CCT
[ENA]
¢þ
>WENV182846041
OKJI01002866
[OKJI] human gut metagenome; human gut
550
626
+
Arg
TCT
[ENA]
¢þ
>WENV182846010
OKJI01000283
[OKJI] human gut metagenome; human gut
590
666
+
Arg
ACG
[ENA]
¢þ
>WENV182845951
OKJI01000024
[OKJI] human gut metagenome; human gut
622
547
-
Pro
TGG
[ENA]
¢þ
>WENV182845998
OKJI01000211
[OKJI] human gut metagenome; human gut
689
617
-
Thr
CGT
[ENA]
¢þ
>WENV182846018
OKJI01000379
[OKJI] human gut metagenome; human gut
1462
1534
+
Thr
GGT
[ENA]
¢þ
>WENV182846028
OKJI01000867
[OKJI] human gut metagenome; human gut
1670
1755
+
Leu
CAG
[ENA]
¢þ
>WENV182846013
OKJI01000345
[OKJI] human gut metagenome; human gut
1725
1799
+
Arg
TCT
[ENA]
¢þ
>WENV182846024
OKJI01000670
[OKJI] human gut metagenome; human gut
2528
2453
-
Ala
TGC
[ENA]
¢þ
>WENV182846000
OKJI01000231
[OKJI] human gut metagenome; human gut
3086
3161
+
Arg
CCG
[ENA]
¢þ
>WENV182845999
OKJI01000214
[OKJI] human gut metagenome; human gut
3093
3165
+
Gln
TTG
[ENA]
¢þ
>WENV182846021
OKJI01000433
[OKJI] human gut metagenome; human gut
3221
3146
-
Arg
TCT
[ENA]
¢þ
>WENV182846014
OKJI01000346
[OKJI] human gut metagenome; human gut
3400
3327
-
Lys
CTT
[ENA]
¢þ
>WENV182846012
OKJI01000327
[OKJI] human gut metagenome; human gut
3561
3488
-
Arg
CCG
[ENA]
¢þ
>WENV182846022
OKJI01000453
[OKJI] human gut metagenome; human gut
3637
3550
-
Ser
CGA
[ENA]
¢þ
>WENV182846019
OKJI01000390
[OKJI] human gut metagenome; human gut
3917
4001
+
Leu
GAG
[ENA]
¢þ
>WENV182846020
OKJI01000402
[OKJI] human gut metagenome; human gut
4400
4488
+
Ser
CGA
[ENA]
¢þ
>WENV182845976
OKJI01000078
[OKJI] human gut metagenome; human gut
4664
4591
-
Ala
GGC
[ENA]
¢þ
>WENV182845966
OKJI01000042
[OKJI] human gut metagenome; human gut
4688
4599
-
Ser
CGA
[ENA]
¢þ
>WENV182846002
OKJI01000244
[OKJI] human gut metagenome; human gut
5312
5228
-
Leu
CAG
[ENA]
¢þ
>WENV182845963
OKJI01000039
[OKJI] human gut metagenome; human gut
5330
5257
-
Trp
CCA
[ENA]
¢þ
>WENV182845992
OKJI01000164
[OKJI] human gut metagenome; human gut
5653
5729
+
Ile2
CAT
[ENA]
¢þ
>WENV182845993
OKJI01000164
[OKJI] human gut metagenome; human gut
5734
5809
+
Ala
TGC
[ENA]
¢þ
>WENV182845994
OKJI01000164
[OKJI] human gut metagenome; human gut
5812
5887
+
Ile
GAT
[ENA]
¢þ
>WENV182845995
OKJI01000164
[OKJI] human gut metagenome; human gut
5896
5985
+
Ser
GCT
[ENA]
¢þ
>WENV182845996
OKJI01000164
[OKJI] human gut metagenome; human gut
5999
6072
+
Glu
TTC
[ENA]
¢þ
>WENV182846017
OKJI01000355
[OKJI] human gut metagenome; human gut
6198
6125
-
Gln
TTG
[ENA]
¢þ
>WENV182846016
OKJI01000355
[OKJI] human gut metagenome; human gut
6284
6211
-
His
GTG
[ENA]
¢þ
>WENV182846015
OKJI01000355
[OKJI] human gut metagenome; human gut
6394
6321
-
Trp
CCA
[ENA]
¢þ
>WENV182845988
OKJI01000119
[OKJI] human gut metagenome; human gut
6818
6744
-
Asp
GTC
[ENA]
¢þ
>WENV182845987
OKJI01000119
[OKJI] human gut metagenome; human gut
6943
6870
-
Glu
TTC
[ENA]
¢þ
>WENV182845952
OKJI01000026
[OKJI] human gut metagenome; human gut
6985
6911
-
Lys
CTT
[ENA]
¢þ
>WENV182845953
OKJI01000031
[OKJI] human gut metagenome; human gut
7488
7561
+
Arg
CCG
[ENA]
¢þ
>WENV182846011
OKJI01000303
[OKJI] human gut metagenome; human gut
8273
8345
+
Thr
CGT
[ENA]
¢þ
>WENV182845969
OKJI01000052
[OKJI] human gut metagenome; human gut
9166
9083
-
Leu
TAG
[ENA]
¢þ
>WENV182846003
OKJI01000248
[OKJI] human gut metagenome; human gut
9425
9355
-
Gly
CCC
[ENA]
¢þ
>WENV182845984
OKJI01000100
[OKJI] human gut metagenome; human gut
10027
10100
+
Arg
CCT
[ENA]
¢þ
>WENV182846001
OKJI01000237
[OKJI] human gut metagenome; human gut
10889
10964
+
Ile2
CAT
[ENA]
¢þ
>WENV182845973
OKJI01000064
[OKJI] human gut metagenome; human gut
11360
11287
-
Gln
TTG
[ENA]
¢þ
>WENV182845972
OKJI01000064
[OKJI] human gut metagenome; human gut
11446
11366
-
Tyr
GTA
[ENA]
¢þ
>WENV182845968
OKJI01000052
[OKJI] human gut metagenome; human gut
11711
11635
-
Lys
CTT
[ENA]
¢þ
>WENV182845967
OKJI01000052
[OKJI] human gut metagenome; human gut
11824
11748
-
Lys
CTT
[ENA]
¢þ
>WENV182845971
OKJI01000056
[OKJI] human gut metagenome; human gut
12112
12037
-
Arg
TCT
[ENA]
¢þ
>WENV182845989
OKJI01000128
[OKJI] human gut metagenome; human gut
12268
12194
-
Pro
CGG
[ENA]
¢þ
>WENV182845970
OKJI01000056
[OKJI] human gut metagenome; human gut
12996
13071
+
His
GTG
[ENA]
¢þ
>WENV182845975
OKJI01000077
[OKJI] human gut metagenome; human gut
13933
13861
-
Val
GAC
[ENA]
¢þ
>WENV182845974
OKJI01000077
[OKJI] human gut metagenome; human gut
14007
13934
-
Gly
GCC
[ENA]
¢þ
>WENV182845990
OKJI01000162
[OKJI] human gut metagenome; human gut
15168
15095
-
Gly
CCC
[ENA]
¢þ
>WENV182845997
OKJI01000165
[OKJI] human gut metagenome; human gut
15592
15505
-
Ser
GGA
[ENA]
¢þ
>WENV182845986
OKJI01000114
[OKJI] human gut metagenome; human gut
18225
18299
+
Leu
CAA
[ENA]
¢þ
>WENV182845985
OKJI01000100
[OKJI] human gut metagenome; human gut
19669
19742
+
Ala
CGC
[ENA]
¢þ
>WENV182845981
OKJI01000096
[OKJI] human gut metagenome; human gut
20228
20303
+
Thr
TGT
[ENA]
¢þ
>WENV182845944
OKJI01000009
[OKJI] human gut metagenome; human gut
21089
21006
-
Leu
TAA
[ENA]
¢þ
>WENV182845977
OKJI01000093
[OKJI] human gut metagenome; human gut
21119
21194
+
Thr
CGT
[ENA]
¢þ
>WENV182845943
OKJI01000009
[OKJI] human gut metagenome; human gut
21197
21106
-
Ile
TAT
[ENA]
¢þ
>WENV182845942
OKJI01000009
[OKJI] human gut metagenome; human gut
21341
21266
-
Val
TAC
[ENA]
¢þ
>WENV182845949
OKJI01000020
[OKJI] human gut metagenome; human gut
21404
21330
-
Met
CAT
[ENA]
¢þ
>WENV182845948
OKJI01000020
[OKJI] human gut metagenome; human gut
21518
21445
-
Thr
GGT
[ENA]
¢þ
>WENV182845947
OKJI01000020
[OKJI] human gut metagenome; human gut
21725
21643
-
Tyr
GTA
[ENA]
¢þ
>WENV182845978
OKJI01000094
[OKJI] human gut metagenome; human gut
23074
23150
+
Ile
GAT
[ENA]
¢þ
>WENV182845979
OKJI01000094
[OKJI] human gut metagenome; human gut
23338
23413
+
Ala
TGC
[ENA]
¢þ
>WENV182845964
OKJI01000040
[OKJI] human gut metagenome; human gut
24495
24567
+
Gln
CTG
[ENA]
¢þ
>WENV182845983
OKJI01000099
[OKJI] human gut metagenome; human gut
26059
25984
-
Glu
CTC
[ENA]
¢þ
>WENV182845982
OKJI01000099
[OKJI] human gut metagenome; human gut
26167
26094
-
Glu
CTC
[ENA]
¢þ
>WENV182845937
OKJI01000002
[OKJI] human gut metagenome; human gut
27748
27673
-
Arg
ACG
[ENA]
¢þ
>WENV182845936
OKJI01000002
[OKJI] human gut metagenome; human gut
28139
28051
-
Ser
GCT
[ENA]
¢þ
>WENV182845935
OKJI01000002
[OKJI] human gut metagenome; human gut
30159
30073
-
Ser
TGA
[ENA]
¢þ
>WENV182845950
OKJI01000021
[OKJI] human gut metagenome; human gut
31544
31633
+
Leu
GAG
[ENA]
¢þ
>WENV182845962
OKJI01000037
[OKJI] human gut metagenome; human gut
35706
35633
-
Pro
TGG
[ENA]
¢þ
>WENV182845961
OKJI01000037
[OKJI] human gut metagenome; human gut
35809
35733
-
Arg
ACG
[ENA]
¢þ
>WENV182845960
OKJI01000037
[OKJI] human gut metagenome; human gut
35910
35822
-
Leu
TAA
[ENA]
¢þ
>WENV182845959
OKJI01000037
[OKJI] human gut metagenome; human gut
35996
35922
-
Gly
GCC
[ENA]
¢þ
>WENV182845958
OKJI01000037
[OKJI] human gut metagenome; human gut
36088
36014
-
Lys
TTT
[ENA]
¢þ
>WENV182845957
OKJI01000037
[OKJI] human gut metagenome; human gut
36169
36094
-
Thr
TGT
[ENA]
¢þ
>WENV182845956
OKJI01000037
[OKJI] human gut metagenome; human gut
36251
36176
-
Val
TAC
[ENA]
¢þ
>WENV182845965
OKJI01000042
[OKJI] human gut metagenome; human gut
36303
36228
-
Asn
GTT
[ENA]
¢þ
>WENV182845955
OKJI01000037
[OKJI] human gut metagenome; human gut
36330
36257
-
Glu
TTC
[ENA]
¢þ
>WENV182845954
OKJI01000037
[OKJI] human gut metagenome; human gut
36405
36331
-
Asn
GTT
[ENA]
¢þ
>WENV182845940
OKJI01000008
[OKJI] human gut metagenome; human gut
38371
38296
-
Lys
TTT
[ENA]
¢þ
>WENV182845941
OKJI01000009
[OKJI] human gut metagenome; human gut
38475
38403
-
Asn
GTT
[ENA]
¢þ
>WENV182845946
OKJI01000011
[OKJI] human gut metagenome; human gut
44479
44552
+
Gly
TCC
[ENA]
¢þ
>WENV182845934
OKJI01000001
[OKJI] human gut metagenome; human gut
47808
47883
+
Arg
CCT
[ENA]
¢þ
>WENV182845945
OKJI01000010
[OKJI] human gut metagenome; human gut
50178
50253
+
Arg
CCT
[ENA]
¢þ
>WENV182845939
OKJI01000007
[OKJI] human gut metagenome; human gut
55194
55120
-
fMet
CAT
[ENA]
¢þ
>WENV182845938
OKJI01000005
[OKJI] human gut metagenome; human gut
61017
60943
-
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK