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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKJO] human gut metagenome; human gut
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846573
OKJO01001440
[OKJO] human gut metagenome; human gut
44
119
+
Thr
TGT
[ENA]
¢þ
>WENV182846561
OKJO01000806
[OKJO] human gut metagenome; human gut
64
153
+
Ser
GCT
[ENA]
¢þ
>WENV182846525
OKJO01000070
[OKJO] human gut metagenome; human gut
96
170
+
Gln
CTG
[ENA]
¢þ
>WENV182846568
OKJO01001198
[OKJO] human gut metagenome; human gut
120
195
+
Glu
TTC
[ENA]
¢þ
>WENV182846574
OKJO01001440
[OKJO] human gut metagenome; human gut
124
195
+
Gly
GCC
[ENA]
¢þ
>WENV182846550
OKJO01000247
[OKJO] human gut metagenome; human gut
132
204
+
Ala
TGC
[ENA]
¢þ
>WENV182846485
OKJO01000002
[OKJO] human gut metagenome; human gut
133
59
-
Gly
TCC
[ENA]
¢þ
>WENV182846500
OKJO01000015
[OKJO] human gut metagenome; human gut
134
59
-
Val
TAC
[ENA]
¢þ
>WENV182846494
OKJO01000009
[OKJO] human gut metagenome; human gut
149
62
-
Ser
GGA
[ENA]
¢þ
>WENV182846556
OKJO01000803
[OKJO] human gut metagenome; human gut
164
239
+
Thr
TGT
[ENA]
¢þ
>WENV182846562
OKJO01000806
[OKJO] human gut metagenome; human gut
167
240
+
Glu
TTC
[ENA]
¢þ
>WENV182846570
OKJO01001380
[OKJO] human gut metagenome; human gut
183
265
+
Tyr
GTA
[ENA]
¢þ
>WENV182846526
OKJO01000070
[OKJO] human gut metagenome; human gut
205
279
+
Gln
CTG
[ENA]
¢þ
>WENV182846575
OKJO01001440
[OKJO] human gut metagenome; human gut
211
296
+
Leu
TAA
[ENA]
¢þ
>WENV182846557
OKJO01000803
[OKJO] human gut metagenome; human gut
250
334
+
Tyr
GTA
[ENA]
¢þ
>WENV182846563
OKJO01000806
[OKJO] human gut metagenome; human gut
252
341
+
Ser
TGA
[ENA]
¢þ
>WENV182846571
OKJO01001380
[OKJO] human gut metagenome; human gut
273
346
+
Gln
TTG
[ENA]
¢þ
>WENV182846576
OKJO01001440
[OKJO] human gut metagenome; human gut
311
384
+
Arg
ACG
[ENA]
¢þ
>WENV182846484
OKJO01000002
[OKJO] human gut metagenome; human gut
334
250
-
Tyr
GTA
[ENA]
¢þ
>WENV182846558
OKJO01000803
[OKJO] human gut metagenome; human gut
340
415
+
fMet
CAT
[ENA]
¢þ
>WENV182846553
OKJO01000444
[OKJO] human gut metagenome; human gut
347
422
+
Trp
CCA
[ENA]
¢þ
>WENV182846572
OKJO01001380
[OKJO] human gut metagenome; human gut
371
441
+
Cys
GCA
[ENA]
¢þ
>WENV182846564
OKJO01000806
[OKJO] human gut metagenome; human gut
374
449
+
fMet
CAT
[ENA]
¢þ
>WENV182846483
OKJO01000002
[OKJO] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¢þ
>WENV182846569
OKJO01001213
[OKJO] human gut metagenome; human gut
440
365
-
Arg
TCT
[ENA]
¢þ
>WENV182846559
OKJO01000803
[OKJO] human gut metagenome; human gut
447
522
+
Thr
GGT
[ENA]
¢þ
>WENV182846565
OKJO01000806
[OKJO] human gut metagenome; human gut
487
563
+
Asp
GTC
[ENA]
¢þ
>WENV182846560
OKJO01000803
[OKJO] human gut metagenome; human gut
528
604
+
Met
CAT
[ENA]
¢þ
>WENV182846554
OKJO01000444
[OKJO] human gut metagenome; human gut
535
611
+
Arg
ACG
[ENA]
¢þ
>WENV182846533
OKJO01000104
[OKJO] human gut metagenome; human gut
563
653
+
Ser
GCT
[ENA]
¢þ
>WENV182846566
OKJO01000806
[OKJO] human gut metagenome; human gut
565
635
+
Gly
TCC
[ENA]
¢þ
>WENV182846567
OKJO01000806
[OKJO] human gut metagenome; human gut
644
719
+
Ile
GAT
[ENA]
¢þ
>WENV182846555
OKJO01000480
[OKJO] human gut metagenome; human gut
990
917
-
Gly
CCC
[ENA]
¢þ
>WENV182846548
OKJO01000215
[OKJO] human gut metagenome; human gut
1363
1439
+
Arg
CCT
[ENA]
¢þ
>WENV182846543
OKJO01000156
[OKJO] human gut metagenome; human gut
1797
1870
+
Gly
TCC
[ENA]
¢þ
>WENV182846544
OKJO01000156
[OKJO] human gut metagenome; human gut
1972
2048
+
Arg
TCT
[ENA]
¢þ
>WENV182846531
OKJO01000094
[OKJO] human gut metagenome; human gut
2326
2241
-
Leu
GAG
[ENA]
¢þ
>WENV182846516
OKJO01000034
[OKJO] human gut metagenome; human gut
2400
2325
-
Asn
GTT
[ENA]
¢þ
>WENV182846547
OKJO01000186
[OKJO] human gut metagenome; human gut
2401
2327
-
Arg
CCG
[ENA]
¢þ
>WENV182846530
OKJO01000094
[OKJO] human gut metagenome; human gut
2414
2339
-
Phe
GAA
[ENA]
¢þ
>WENV182846529
OKJO01000094
[OKJO] human gut metagenome; human gut
2495
2420
-
Asp
GTC
[ENA]
¢þ
>WENV182846545
OKJO01000161
[OKJO] human gut metagenome; human gut
2644
2570
-
Ile2
CAT
[ENA]
¢þ
>WENV182846546
OKJO01000185
[OKJO] human gut metagenome; human gut
2692
2604
-
Ser
TGA
[ENA]
¢þ
>WENV182846497
OKJO01000015
[OKJO] human gut metagenome; human gut
2828
2903
+
Ala
GGC
[ENA]
¢þ
>WENV182846498
OKJO01000015
[OKJO] human gut metagenome; human gut
2945
3020
+
Ala
GGC
[ENA]
¢þ
>WENV182846549
OKJO01000216
[OKJO] human gut metagenome; human gut
3038
2963
-
Lys
CTT
[ENA]
¢þ
>WENV182846551
OKJO01000247
[OKJO] human gut metagenome; human gut
3519
3593
+
Val
TAC
[ENA]
¢þ
>WENV182846552
OKJO01000247
[OKJO] human gut metagenome; human gut
3598
3672
+
Lys
TTT
[ENA]
¢þ
>WENV182846514
OKJO01000034
[OKJO] human gut metagenome; human gut
4149
4224
+
Asn
GTT
[ENA]
¢þ
>WENV182846519
OKJO01000042
[OKJO] human gut metagenome; human gut
5294
5219
-
Thr
CGT
[ENA]
¢þ
>WENV182846534
OKJO01000130
[OKJO] human gut metagenome; human gut
5859
5776
-
Leu
CAA
[ENA]
¢þ
>WENV182846528
OKJO01000083
[OKJO] human gut metagenome; human gut
7704
7788
+
Leu
TAG
[ENA]
¢þ
>WENV182846535
OKJO01000143
[OKJO] human gut metagenome; human gut
7841
7916
+
His
GTG
[ENA]
¢þ
>WENV182846536
OKJO01000143
[OKJO] human gut metagenome; human gut
7941
8015
+
Gln
TTG
[ENA]
¢þ
>WENV182846537
OKJO01000143
[OKJO] human gut metagenome; human gut
8020
8095
+
Lys
TTT
[ENA]
¢þ
>WENV182846538
OKJO01000143
[OKJO] human gut metagenome; human gut
8101
8175
+
Glu
TTC
[ENA]
¢þ
>WENV182846482
OKJO01000002
[OKJO] human gut metagenome; human gut
8117
8041
-
Pro
TGG
[ENA]
¢þ
>WENV182846539
OKJO01000143
[OKJO] human gut metagenome; human gut
8181
8256
+
Val
TAC
[ENA]
¢þ
>WENV182846540
OKJO01000143
[OKJO] human gut metagenome; human gut
8260
8334
+
Gly
GCC
[ENA]
¢þ
>WENV182846541
OKJO01000143
[OKJO] human gut metagenome; human gut
8344
8418
+
Cys
GCA
[ENA]
¢þ
>WENV182846542
OKJO01000143
[OKJO] human gut metagenome; human gut
8433
8521
+
Leu
TAA
[ENA]
¢þ
>WENV182846532
OKJO01000100
[OKJO] human gut metagenome; human gut
9629
9719
+
Ser
GGA
[ENA]
¢þ
>WENV182846504
OKJO01000016
[OKJO] human gut metagenome; human gut
10070
9995
-
Asn
GTT
[ENA]
¢þ
>WENV182846471
OKJO01000001
[OKJO] human gut metagenome; human gut
10321
10394
+
Gly
CCC
[ENA]
¢þ
>WENV182846524
OKJO01000066
[OKJO] human gut metagenome; human gut
10579
10669
+
Ser
CGA
[ENA]
¢þ
>WENV182846492
OKJO01000007
[OKJO] human gut metagenome; human gut
11708
11632
-
Pro
GGG
[ENA]
¢þ
>WENV182846527
OKJO01000079
[OKJO] human gut metagenome; human gut
19130
19046
-
Leu
CAA
[ENA]
¢þ
>WENV182846515
OKJO01000034
[OKJO] human gut metagenome; human gut
19739
19664
-
Asn
GTT
[ENA]
¢þ
>WENV182846499
OKJO01000015
[OKJO] human gut metagenome; human gut
19821
19749
-
Arg
CCT
[ENA]
¢þ
>WENV182846523
OKJO01000065
[OKJO] human gut metagenome; human gut
22908
22833
-
Arg
TCT
[ENA]
¢þ
>WENV182846522
OKJO01000059
[OKJO] human gut metagenome; human gut
25665
25590
-
Arg
TCT
[ENA]
¢þ
>WENV182846521
OKJO01000059
[OKJO] human gut metagenome; human gut
25743
25669
-
Asn
GTT
[ENA]
¢þ
>WENV182846496
OKJO01000012
[OKJO] human gut metagenome; human gut
27292
27205
-
Ser
TGA
[ENA]
¢þ
>WENV182846520
OKJO01000050
[OKJO] human gut metagenome; human gut
33620
33695
+
Ile2
CAT
[ENA]
¢þ
>WENV182846495
OKJO01000012
[OKJO] human gut metagenome; human gut
33727
33640
-
Ser
TGA
[ENA]
¢þ
>WENV182846518
OKJO01000042
[OKJO] human gut metagenome; human gut
34754
34678
-
Asp
GTC
[ENA]
¢þ
>WENV182846513
OKJO01000029
[OKJO] human gut metagenome; human gut
42406
42320
-
Leu
CAG
[ENA]
¢þ
>WENV182846517
OKJO01000037
[OKJO] human gut metagenome; human gut
45882
45807
-
Lys
TTT
[ENA]
¢þ
>WENV182846489
OKJO01000005
[OKJO] human gut metagenome; human gut
51670
51746
+
Val
GAC
[ENA]
¢þ
>WENV182846490
OKJO01000005
[OKJO] human gut metagenome; human gut
51751
51827
+
Val
GAC
[ENA]
¢þ
>WENV182846509
OKJO01000026
[OKJO] human gut metagenome; human gut
63072
63148
+
Met
CAT
[ENA]
¢þ
>WENV182846510
OKJO01000026
[OKJO] human gut metagenome; human gut
63157
63241
+
Leu
TAG
[ENA]
¢þ
>WENV182846511
OKJO01000026
[OKJO] human gut metagenome; human gut
63265
63339
+
Gln
TTG
[ENA]
¢þ
>WENV182846512
OKJO01000026
[OKJO] human gut metagenome; human gut
63357
63433
+
Met
CAT
[ENA]
¢þ
>WENV182846481
OKJO01000002
[OKJO] human gut metagenome; human gut
64524
64448
-
Pro
TGG
[ENA]
¢þ
>WENV182846480
OKJO01000002
[OKJO] human gut metagenome; human gut
64655
64569
-
Leu
CAG
[ENA]
¢þ
>WENV182846479
OKJO01000002
[OKJO] human gut metagenome; human gut
64752
64677
-
His
GTG
[ENA]
¢þ
>WENV182846478
OKJO01000002
[OKJO] human gut metagenome; human gut
64896
64820
-
Arg
CCG
[ENA]
¢þ
>WENV182846508
OKJO01000024
[OKJO] human gut metagenome; human gut
65851
65776
-
Trp
CCA
[ENA]
¢þ
>WENV182846507
OKJO01000020
[OKJO] human gut metagenome; human gut
67175
67250
+
Phe
GAA
[ENA]
¢þ
>WENV182846487
OKJO01000003
[OKJO] human gut metagenome; human gut
73225
73149
-
fMet
CAT
[ENA]
¢þ
>WENV182846486
OKJO01000003
[OKJO] human gut metagenome; human gut
75133
75047
-
Leu
GAG
[ENA]
¢þ
>WENV182846501
OKJO01000016
[OKJO] human gut metagenome; human gut
75620
75695
+
Gly
GCC
[ENA]
¢þ
>WENV182846502
OKJO01000016
[OKJO] human gut metagenome; human gut
75747
75820
+
Cys
GCA
[ENA]
¢þ
>WENV182846503
OKJO01000016
[OKJO] human gut metagenome; human gut
75832
75918
+
Leu
TAA
[ENA]
¢þ
>WENV182846476
OKJO01000001
[OKJO] human gut metagenome; human gut
86891
86815
-
fMet
CAT
[ENA]
¢þ
>WENV182846506
OKJO01000017
[OKJO] human gut metagenome; human gut
99277
99202
-
Gly
GCC
[ENA]
¢þ
>WENV182846505
OKJO01000017
[OKJO] human gut metagenome; human gut
99398
99323
-
Gly
GCC
[ENA]
¢þ
>WENV182846491
OKJO01000006
[OKJO] human gut metagenome; human gut
117496
117580
+
Tyr
GTA
[ENA]
¢þ
>WENV182846493
OKJO01000009
[OKJO] human gut metagenome; human gut
125965
126041
+
Arg
TCT
[ENA]
¢þ
>WENV182846477
OKJO01000002
[OKJO] human gut metagenome; human gut
136718
136812
+
SeC
TCA
[ENA]
¢þ
>WENV182846488
OKJO01000004
[OKJO] human gut metagenome; human gut
143292
143368
+
Arg
TCT
[ENA]
¢þ
>WENV182846472
OKJO01000001
[OKJO] human gut metagenome; human gut
196204
196296
+
Ser
GCT
[ENA]
¢þ
>WENV182846473
OKJO01000001
[OKJO] human gut metagenome; human gut
196301
196377
+
Arg
ACG
[ENA]
¢þ
>WENV182846474
OKJO01000001
[OKJO] human gut metagenome; human gut
196442
196518
+
Arg
ACG
[ENA]
¢þ
>WENV182846475
OKJO01000001
[OKJO] human gut metagenome; human gut
196583
196659
+
Arg
ACG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK