This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKJQ] human gut metagenome; human gut
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846697
OKJQ01000474
[OKJQ] human gut metagenome; human gut
90
166
+
fMet
CAT
[ENA]
¢þ
>WENV182846700
OKJQ01000646
[OKJQ] human gut metagenome; human gut
100
175
+
Val
TAC
[ENA]
¢þ
>WENV182846664
OKJQ01000088
[OKJQ] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182846701
OKJQ01000691
[OKJQ] human gut metagenome; human gut
109
33
-
Val
GAC
[ENA]
¢þ
>WENV182846649
OKJQ01000041
[OKJQ] human gut metagenome; human gut
133
59
-
Gly
TCC
[ENA]
¢þ
>WENV182846696
OKJQ01000422
[OKJQ] human gut metagenome; human gut
137
61
-
Pro
TGG
[ENA]
¢þ
>WENV182846710
OKJQ01000895
[OKJQ] human gut metagenome; human gut
154
69
-
Leu
CAA
[ENA]
¢þ
>WENV182846702
OKJQ01000711
[OKJQ] human gut metagenome; human gut
196
121
-
Phe
GAA
[ENA]
¢þ
>WENV182846699
OKJQ01000579
[OKJQ] human gut metagenome; human gut
231
306
+
Ala
TGC
[ENA]
¢þ
>WENV182846686
OKJQ01000267
[OKJQ] human gut metagenome; human gut
235
141
-
SeC
TCA
[ENA]
¢þ
>WENV182846709
OKJQ01000895
[OKJQ] human gut metagenome; human gut
237
167
-
Cys
GCA
[ENA]
¢þ
>WENV182846695
OKJQ01000403
[OKJQ] human gut metagenome; human gut
293
218
-
Arg
TCT
[ENA]
¢þ
>WENV182846708
OKJQ01000895
[OKJQ] human gut metagenome; human gut
314
243
-
Gln
TTG
[ENA]
¢þ
>WENV182846648
OKJQ01000041
[OKJQ] human gut metagenome; human gut
334
250
-
Tyr
GTA
[ENA]
¢þ
>WENV182846711
OKJQ01001174
[OKJQ] human gut metagenome; human gut
373
458
+
Leu
CAA
[ENA]
¢þ
>WENV182846707
OKJQ01000895
[OKJQ] human gut metagenome; human gut
398
325
-
His
GTG
[ENA]
¢þ
>WENV182846647
OKJQ01000041
[OKJQ] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¢þ
>WENV182846706
OKJQ01000895
[OKJQ] human gut metagenome; human gut
485
411
-
Phe
GAA
[ENA]
¢þ
>WENV182846705
OKJQ01000895
[OKJQ] human gut metagenome; human gut
578
503
-
Asp
GTC
[ENA]
¢þ
>WENV182846704
OKJQ01000895
[OKJQ] human gut metagenome; human gut
662
587
-
fMet
CAT
[ENA]
¢þ
>WENV182846703
OKJQ01000895
[OKJQ] human gut metagenome; human gut
768
676
-
Ser
TGA
[ENA]
¢þ
>WENV182846698
OKJQ01000503
[OKJQ] human gut metagenome; human gut
886
810
-
Ile2
CAT
[ENA]
¢þ
>WENV182846633
OKJQ01000010
[OKJQ] human gut metagenome; human gut
1170
1087
-
Leu
CAA
[ENA]
¢þ
>WENV182846679
OKJQ01000140
[OKJQ] human gut metagenome; human gut
1595
1506
-
Ser
CGA
[ENA]
¢þ
>WENV182846666
OKJQ01000103
[OKJQ] human gut metagenome; human gut
1915
1821
-
SeC
TCA
[ENA]
¢þ
>WENV182846675
OKJQ01000140
[OKJQ] human gut metagenome; human gut
2587
2662
+
Asn
GTT
[ENA]
¢þ
>WENV182846680
OKJQ01000147
[OKJQ] human gut metagenome; human gut
2706
2781
+
Ala
GGC
[ENA]
¢þ
>WENV182846682
OKJQ01000187
[OKJQ] human gut metagenome; human gut
3434
3345
-
Ser
TGA
[ENA]
¢þ
>WENV182846692
OKJQ01000350
[OKJQ] human gut metagenome; human gut
4005
4078
+
Arg
CCT
[ENA]
¢þ
>WENV182846690
OKJQ01000338
[OKJQ] human gut metagenome; human gut
4185
4110
-
Ala
GGC
[ENA]
¢þ
>WENV182846693
OKJQ01000356
[OKJQ] human gut metagenome; human gut
5156
5231
+
Lys
TTT
[ENA]
¢þ
>WENV182846634
OKJQ01000012
[OKJQ] human gut metagenome; human gut
5204
5291
+
Ser
GGA
[ENA]
¢þ
>WENV182846694
OKJQ01000356
[OKJQ] human gut metagenome; human gut
5257
5332
+
Lys
TTT
[ENA]
¢þ
>WENV182846691
OKJQ01000348
[OKJQ] human gut metagenome; human gut
5554
5479
-
Ala
TGC
[ENA]
¢þ
>WENV182846687
OKJQ01000324
[OKJQ] human gut metagenome; human gut
5879
5972
+
Ser
GCT
[ENA]
¢þ
>WENV182846674
OKJQ01000137
[OKJQ] human gut metagenome; human gut
5986
5900
-
Leu
TAA
[ENA]
¢þ
>WENV182846688
OKJQ01000324
[OKJQ] human gut metagenome; human gut
5997
6073
+
Arg
ACG
[ENA]
¢þ
>WENV182846673
OKJQ01000137
[OKJQ] human gut metagenome; human gut
6071
5998
-
Cys
GCA
[ENA]
¢þ
>WENV182846689
OKJQ01000324
[OKJQ] human gut metagenome; human gut
6127
6203
+
Arg
ACG
[ENA]
¢þ
>WENV182846672
OKJQ01000137
[OKJQ] human gut metagenome; human gut
6198
6123
-
Gly
GCC
[ENA]
¢þ
>WENV182846624
OKJQ01000005
[OKJQ] human gut metagenome; human gut
6375
6302
-
Gly
CCC
[ENA]
¢þ
>WENV182846685
OKJQ01000224
[OKJQ] human gut metagenome; human gut
7413
7498
+
Leu
GAG
[ENA]
¢þ
>WENV182846635
OKJQ01000012
[OKJQ] human gut metagenome; human gut
8111
8198
+
Ser
GGA
[ENA]
¢þ
>WENV182846646
OKJQ01000041
[OKJQ] human gut metagenome; human gut
8131
8055
-
Pro
TGG
[ENA]
¢þ
>WENV182846668
OKJQ01000127
[OKJQ] human gut metagenome; human gut
8235
8151
-
Leu
CAA
[ENA]
¢þ
>WENV182846676
OKJQ01000140
[OKJQ] human gut metagenome; human gut
8306
8381
+
Asn
GTT
[ENA]
¢þ
>WENV182846667
OKJQ01000112
[OKJQ] human gut metagenome; human gut
9407
9483
+
Asp
GTC
[ENA]
¢þ
>WENV182846650
OKJQ01000044
[OKJQ] human gut metagenome; human gut
10611
10535
-
Pro
CGG
[ENA]
¢þ
>WENV182846658
OKJQ01000069
[OKJQ] human gut metagenome; human gut
10903
10989
+
Leu
GAG
[ENA]
¢þ
>WENV182846663
OKJQ01000072
[OKJQ] human gut metagenome; human gut
12114
12039
-
Gly
GCC
[ENA]
¢þ
>WENV182846622
OKJQ01000003
[OKJQ] human gut metagenome; human gut
12231
12155
-
Pro
GGG
[ENA]
¢þ
>WENV182846662
OKJQ01000072
[OKJQ] human gut metagenome; human gut
12235
12160
-
Gly
GCC
[ENA]
¢þ
>WENV182846661
OKJQ01000072
[OKJQ] human gut metagenome; human gut
12356
12281
-
Gly
GCC
[ENA]
¢þ
>WENV182846684
OKJQ01000212
[OKJQ] human gut metagenome; human gut
13413
13339
-
Gln
CTG
[ENA]
¢þ
>WENV182846683
OKJQ01000212
[OKJQ] human gut metagenome; human gut
13522
13448
-
Gln
CTG
[ENA]
¢þ
>WENV182846659
OKJQ01000069
[OKJQ] human gut metagenome; human gut
14920
14996
+
fMet
CAT
[ENA]
¢þ
>WENV182846678
OKJQ01000140
[OKJQ] human gut metagenome; human gut
17298
17223
-
Asn
GTT
[ENA]
¢þ
>WENV182846681
OKJQ01000171
[OKJQ] human gut metagenome; human gut
18709
18634
-
Trp
CCA
[ENA]
¢þ
>WENV182846677
OKJQ01000140
[OKJQ] human gut metagenome; human gut
19056
19131
+
Asn
GTT
[ENA]
¢þ
>WENV182846652
OKJQ01000048
[OKJQ] human gut metagenome; human gut
19607
19682
+
Asn
GTT
[ENA]
¢þ
>WENV182846665
OKJQ01000089
[OKJQ] human gut metagenome; human gut
22196
22121
-
Thr
TGT
[ENA]
¢þ
>WENV182846653
OKJQ01000048
[OKJQ] human gut metagenome; human gut
22864
22939
+
Asn
GTT
[ENA]
¢þ
>WENV182846644
OKJQ01000035
[OKJQ] human gut metagenome; human gut
24315
24390
+
Phe
GAA
[ENA]
¢þ
>WENV182846669
OKJQ01000133
[OKJQ] human gut metagenome; human gut
24339
24423
+
Tyr
GTA
[ENA]
¢þ
>WENV182846670
OKJQ01000133
[OKJQ] human gut metagenome; human gut
24458
24542
+
Tyr
GTA
[ENA]
¢þ
>WENV182846671
OKJQ01000133
[OKJQ] human gut metagenome; human gut
24577
24661
+
Tyr
GTA
[ENA]
¢þ
>WENV182846632
OKJQ01000009
[OKJQ] human gut metagenome; human gut
27459
27383
-
Pro
GGG
[ENA]
¢þ
>WENV182846641
OKJQ01000017
[OKJQ] human gut metagenome; human gut
30434
30359
-
Ile2
CAT
[ENA]
¢þ
>WENV182846651
OKJQ01000045
[OKJQ] human gut metagenome; human gut
34324
34400
+
Arg
TCT
[ENA]
¢þ
>WENV182846637
OKJQ01000012
[OKJQ] human gut metagenome; human gut
35906
35819
-
Ser
TGA
[ENA]
¢þ
>WENV182846655
OKJQ01000048
[OKJQ] human gut metagenome; human gut
36644
36569
-
Asn
GTT
[ENA]
¢þ
>WENV182846645
OKJQ01000036
[OKJQ] human gut metagenome; human gut
37721
37627
-
SeC
TCA
[ENA]
¢þ
>WENV182846654
OKJQ01000048
[OKJQ] human gut metagenome; human gut
38393
38468
+
Asn
GTT
[ENA]
¢þ
>WENV182846636
OKJQ01000012
[OKJQ] human gut metagenome; human gut
41448
41361
-
Ser
TGA
[ENA]
¢þ
>WENV182846617
OKJQ01000001
[OKJQ] human gut metagenome; human gut
42346
42270
-
Arg
TCT
[ENA]
¢þ
>WENV182846660
OKJQ01000072
[OKJQ] human gut metagenome; human gut
45539
45614
+
Phe
GAA
[ENA]
¢þ
>WENV182846640
OKJQ01000015
[OKJQ] human gut metagenome; human gut
45864
45788
-
fMet
CAT
[ENA]
¢þ
>WENV182846639
OKJQ01000015
[OKJQ] human gut metagenome; human gut
47737
47651
-
Leu
GAG
[ENA]
¢þ
>WENV182846656
OKJQ01000053
[OKJQ] human gut metagenome; human gut
48548
48472
-
Asp
GTC
[ENA]
¢þ
>WENV182846657
OKJQ01000055
[OKJQ] human gut metagenome; human gut
50118
50191
+
Gly
CCC
[ENA]
¢þ
>WENV182846643
OKJQ01000032
[OKJQ] human gut metagenome; human gut
55567
55491
-
Val
GAC
[ENA]
¢þ
>WENV182846642
OKJQ01000032
[OKJQ] human gut metagenome; human gut
55648
55572
-
Val
GAC
[ENA]
¢þ
>WENV182846625
OKJQ01000006
[OKJQ] human gut metagenome; human gut
60562
60638
+
Val
GAC
[ENA]
¢þ
>WENV182846626
OKJQ01000006
[OKJQ] human gut metagenome; human gut
60643
60719
+
Val
GAC
[ENA]
¢þ
>WENV182846638
OKJQ01000013
[OKJQ] human gut metagenome; human gut
72665
72590
-
Phe
GAA
[ENA]
¢þ
>WENV182846621
OKJQ01000002
[OKJQ] human gut metagenome; human gut
74738
74662
-
fMet
CAT
[ENA]
¢þ
>WENV182846620
OKJQ01000002
[OKJQ] human gut metagenome; human gut
74986
74910
-
fMet
CAT
[ENA]
¢þ
>WENV182846619
OKJQ01000002
[OKJQ] human gut metagenome; human gut
75234
75158
-
fMet
CAT
[ENA]
¢þ
>WENV182846630
OKJQ01000008
[OKJQ] human gut metagenome; human gut
78554
78641
+
Ser
TGA
[ENA]
¢þ
>WENV182846623
OKJQ01000005
[OKJQ] human gut metagenome; human gut
102914
102989
+
Phe
GAA
[ENA]
¢þ
>WENV182846627
OKJQ01000007
[OKJQ] human gut metagenome; human gut
108991
109063
+
Arg
CCT
[ENA]
¢þ
>WENV182846631
OKJQ01000008
[OKJQ] human gut metagenome; human gut
122214
122127
-
Ser
GGA
[ENA]
¢þ
>WENV182846629
OKJQ01000007
[OKJQ] human gut metagenome; human gut
127286
127211
-
Ala
GGC
[ENA]
¢þ
>WENV182846628
OKJQ01000007
[OKJQ] human gut metagenome; human gut
127403
127328
-
Ala
GGC
[ENA]
¢þ
>WENV182846618
OKJQ01000002
[OKJQ] human gut metagenome; human gut
188578
188670
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK