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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OKJU] human gut metagenome; human gut
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846961
OKJU01002729
[OKJU] human gut metagenome; human gut
44
116
+
Thr
CGT
[ENA]
¢þ
>WENV182846912
OKJU01000303
[OKJU] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182846950
OKJU01001575
[OKJU] human gut metagenome; human gut
63
138
+
Asn
GTT
[ENA]
¢þ
>WENV182846964
OKJU01004149
[OKJU] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¢þ
>WENV182846911
OKJU01000218
[OKJU] human gut metagenome; human gut
86
172
+
Leu
CAG
[ENA]
¢þ
>WENV182846962
OKJU01003071
[OKJU] human gut metagenome; human gut
102
177
+
Trp
CCA
[ENA]
¢þ
>WENV182846924
OKJU01000450
[OKJU] human gut metagenome; human gut
131
205
+
Gln
CTG
[ENA]
¢þ
>WENV182846887
OKJU01000130
[OKJU] human gut metagenome; human gut
132
204
+
Ala
TGC
[ENA]
¢þ
>WENV182846951
OKJU01001575
[OKJU] human gut metagenome; human gut
147
221
+
Glu
TTC
[ENA]
¢þ
>WENV182846913
OKJU01000303
[OKJU] human gut metagenome; human gut
176
266
+
Ser
GGA
[ENA]
¢þ
>WENV182846932
OKJU01000814
[OKJU] human gut metagenome; human gut
177
102
-
Val
TAC
[ENA]
¢þ
>WENV182846965
OKJU01004149
[OKJU] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¢þ
>WENV182846972
OKJU01004285
[OKJU] human gut metagenome; human gut
186
261
+
Trp
CCA
[ENA]
¢þ
>WENV182846956
OKJU01002140
[OKJU] human gut metagenome; human gut
203
279
+
Arg
TCT
[ENA]
¢þ
>WENV182846985
OKJU01006202
[OKJU] human gut metagenome; human gut
204
280
+
Ile
GAT
[ENA]
¢þ
>WENV182846952
OKJU01001575
[OKJU] human gut metagenome; human gut
227
302
+
Val
TAC
[ENA]
¢þ
>WENV182846945
OKJU01001333
[OKJU] human gut metagenome; human gut
236
161
-
Lys
CTT
[ENA]
¢þ
>WENV182846987
OKJU01006603
[OKJU] human gut metagenome; human gut
238
167
-
Trp
CCA
[ENA]
¢þ
>WENV182846921
OKJU01000393
[OKJU] human gut metagenome; human gut
239
163
-
Arg
CCT
[ENA]
¢þ
>WENV182846966
OKJU01004149
[OKJU] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¢þ
>WENV182846914
OKJU01000303
[OKJU] human gut metagenome; human gut
282
355
+
Glu
TTC
[ENA]
¢þ
>WENV182846942
OKJU01001247
[OKJU] human gut metagenome; human gut
283
359
+
Arg
ACG
[ENA]
¢þ
>WENV182846978
OKJU01004538
[OKJU] human gut metagenome; human gut
311
235
-
Met
CAT
[ENA]
¢þ
>WENV182846983
OKJU01005121
[OKJU] human gut metagenome; human gut
311
384
+
Lys
TTT
[ENA]
¢þ
>WENV182846982
OKJU01004857
[OKJU] human gut metagenome; human gut
345
434
+
Ser
CGA
[ENA]
¢þ
>WENV182846967
OKJU01004149
[OKJU] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¢þ
>WENV182846928
OKJU01000511
[OKJU] human gut metagenome; human gut
351
276
-
Thr
GGT
[ENA]
¢þ
>WENV182846973
OKJU01004285
[OKJU] human gut metagenome; human gut
374
450
+
Arg
ACG
[ENA]
¢þ
>WENV182846949
OKJU01001536
[OKJU] human gut metagenome; human gut
386
313
-
Ile2
CAT
[ENA]
¢þ
>WENV182846984
OKJU01005906
[OKJU] human gut metagenome; human gut
388
464
+
Arg
TCT
[ENA]
¢þ
>WENV182846944
OKJU01001307
[OKJU] human gut metagenome; human gut
391
305
-
Leu
GAG
[ENA]
¢þ
>WENV182846977
OKJU01004538
[OKJU] human gut metagenome; human gut
392
317
-
Thr
GGT
[ENA]
¢þ
>WENV182846986
OKJU01006202
[OKJU] human gut metagenome; human gut
411
486
+
Ala
TGC
[ENA]
¢þ
>WENV182846927
OKJU01000511
[OKJU] human gut metagenome; human gut
431
357
-
Gly
TCC
[ENA]
¢þ
>WENV182846968
OKJU01004149
[OKJU] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¢þ
>WENV182846988
OKJU01007024
[OKJU] human gut metagenome; human gut
477
401
-
Arg
TCT
[ENA]
¢þ
>WENV182846976
OKJU01004538
[OKJU] human gut metagenome; human gut
499
424
-
fMet
CAT
[ENA]
¢þ
>WENV182846969
OKJU01004149
[OKJU] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¢þ
>WENV182846975
OKJU01004538
[OKJU] human gut metagenome; human gut
589
505
-
Tyr
GTA
[ENA]
¢þ
>WENV182846926
OKJU01000511
[OKJU] human gut metagenome; human gut
631
547
-
Tyr
GTA
[ENA]
¢þ
>WENV182846947
OKJU01001515
[OKJU] human gut metagenome; human gut
640
566
-
Arg
TCT
[ENA]
¢þ
>WENV182846970
OKJU01004149
[OKJU] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¢þ
>WENV182846980
OKJU01004689
[OKJU] human gut metagenome; human gut
661
573
-
Leu
TAA
[ENA]
¢þ
>WENV182846974
OKJU01004538
[OKJU] human gut metagenome; human gut
675
600
-
Thr
TGT
[ENA]
¢þ
>WENV182846981
OKJU01004856
[OKJU] human gut metagenome; human gut
706
781
+
Thr
CGT
[ENA]
¢þ
>WENV182846925
OKJU01000511
[OKJU] human gut metagenome; human gut
717
642
-
Thr
TGT
[ENA]
¢þ
>WENV182846971
OKJU01004149
[OKJU] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¢þ
>WENV182846979
OKJU01004689
[OKJU] human gut metagenome; human gut
750
676
-
Cys
GCA
[ENA]
¢þ
>WENV182846955
OKJU01002069
[OKJU] human gut metagenome; human gut
820
895
+
Asn
GTT
[ENA]
¢þ
>WENV182846960
OKJU01002694
[OKJU] human gut metagenome; human gut
853
777
-
Arg
TCT
[ENA]
¢þ
>WENV182846922
OKJU01000429
[OKJU] human gut metagenome; human gut
896
812
-
Leu
CAA
[ENA]
¢þ
>WENV182846963
OKJU01003766
[OKJU] human gut metagenome; human gut
903
989
+
Leu
CAG
[ENA]
¢þ
>WENV182846959
OKJU01002694
[OKJU] human gut metagenome; human gut
1028
955
-
Gly
TCC
[ENA]
¢þ
>WENV182846929
OKJU01000678
[OKJU] human gut metagenome; human gut
1036
1109
+
Gly
CCC
[ENA]
¢þ
>WENV182846958
OKJU01002694
[OKJU] human gut metagenome; human gut
1115
1039
-
Pro
TGG
[ENA]
¢þ
>WENV182846948
OKJU01001520
[OKJU] human gut metagenome; human gut
1183
1111
-
Arg
CCT
[ENA]
¢þ
>WENV182846954
OKJU01001931
[OKJU] human gut metagenome; human gut
1251
1157
-
SeC
TCA
[ENA]
¢þ
>WENV182846953
OKJU01001801
[OKJU] human gut metagenome; human gut
1280
1368
+
Ser
TGA
[ENA]
¢þ
>WENV182846919
OKJU01000373
[OKJU] human gut metagenome; human gut
1306
1381
+
Phe
GAA
[ENA]
¢þ
>WENV182846920
OKJU01000373
[OKJU] human gut metagenome; human gut
1387
1461
+
Thr
TGT
[ENA]
¢þ
>WENV182846946
OKJU01001368
[OKJU] human gut metagenome; human gut
1418
1489
+
Trp
CCA
[ENA]
¢þ
>WENV182846939
OKJU01001068
[OKJU] human gut metagenome; human gut
1429
1504
+
Phe
GAA
[ENA]
¢þ
>WENV182846884
OKJU01000090
[OKJU] human gut metagenome; human gut
1442
1352
-
Ser
CGA
[ENA]
¢þ
>WENV182846957
OKJU01002239
[OKJU] human gut metagenome; human gut
1497
1410
-
Ser
GGA
[ENA]
¢þ
>WENV182846941
OKJU01001190
[OKJU] human gut metagenome; human gut
1543
1468
-
Ile2
CAT
[ENA]
¢þ
>WENV182846940
OKJU01001091
[OKJU] human gut metagenome; human gut
1556
1481
-
Arg
TCT
[ENA]
¢þ
>WENV182846934
OKJU01000890
[OKJU] human gut metagenome; human gut
1694
1607
-
Ser
TGA
[ENA]
¢þ
>WENV182846938
OKJU01001002
[OKJU] human gut metagenome; human gut
1924
1999
+
Phe
GAA
[ENA]
¢þ
>WENV182846943
OKJU01001296
[OKJU] human gut metagenome; human gut
2179
2089
-
Ser
GGA
[ENA]
¢þ
>WENV182846937
OKJU01000925
[OKJU] human gut metagenome; human gut
2361
2276
-
Leu
GAG
[ENA]
¢þ
>WENV182846936
OKJU01000925
[OKJU] human gut metagenome; human gut
2449
2374
-
Phe
GAA
[ENA]
¢þ
>WENV182846933
OKJU01000815
[OKJU] human gut metagenome; human gut
2497
2407
-
Ser
GCT
[ENA]
¢þ
>WENV182846935
OKJU01000925
[OKJU] human gut metagenome; human gut
2530
2455
-
Asp
GTC
[ENA]
¢þ
>WENV182846916
OKJU01000328
[OKJU] human gut metagenome; human gut
2795
2881
+
Leu
GAG
[ENA]
¢þ
>WENV182846930
OKJU01000814
[OKJU] human gut metagenome; human gut
2876
2951
+
Ala
GGC
[ENA]
¢þ
>WENV182846931
OKJU01000814
[OKJU] human gut metagenome; human gut
2993
3068
+
Ala
GGC
[ENA]
¢þ
>WENV182846874
OKJU01000031
[OKJU] human gut metagenome; human gut
3445
3361
-
Leu
CAA
[ENA]
¢þ
>WENV182846888
OKJU01000130
[OKJU] human gut metagenome; human gut
3519
3593
+
Val
TAC
[ENA]
¢þ
>WENV182846889
OKJU01000130
[OKJU] human gut metagenome; human gut
3598
3672
+
Lys
TTT
[ENA]
¢þ
>WENV182846890
OKJU01000130
[OKJU] human gut metagenome; human gut
3687
3770
+
Leu
TAG
[ENA]
¢þ
>WENV182846891
OKJU01000130
[OKJU] human gut metagenome; human gut
3776
3851
+
Thr
TGT
[ENA]
¢þ
>WENV182846892
OKJU01000130
[OKJU] human gut metagenome; human gut
3856
3927
+
Gly
GCC
[ENA]
¢þ
>WENV182846893
OKJU01000130
[OKJU] human gut metagenome; human gut
3943
4028
+
Leu
TAA
[ENA]
¢þ
>WENV182846894
OKJU01000130
[OKJU] human gut metagenome; human gut
4043
4116
+
Arg
ACG
[ENA]
¢þ
>WENV182846895
OKJU01000130
[OKJU] human gut metagenome; human gut
4128
4201
+
Pro
TGG
[ENA]
¢þ
>WENV182846923
OKJU01000449
[OKJU] human gut metagenome; human gut
4712
4788
+
Pro
CGG
[ENA]
¢þ
>WENV182846918
OKJU01000368
[OKJU] human gut metagenome; human gut
6079
6162
+
Leu
CAA
[ENA]
¢þ
>WENV182846873
OKJU01000027
[OKJU] human gut metagenome; human gut
6134
6209
+
Phe
GAA
[ENA]
¢þ
>WENV182846917
OKJU01000328
[OKJU] human gut metagenome; human gut
6812
6888
+
fMet
CAT
[ENA]
¢þ
>WENV182846915
OKJU01000323
[OKJU] human gut metagenome; human gut
7125
7199
+
Arg
CCG
[ENA]
¢þ
>WENV182846886
OKJU01000115
[OKJU] human gut metagenome; human gut
8000
7924
-
Asp
GTC
[ENA]
¢þ
>WENV182846903
OKJU01000173
[OKJU] human gut metagenome; human gut
9141
9055
-
Leu
TAA
[ENA]
¢þ
>WENV182846902
OKJU01000173
[OKJU] human gut metagenome; human gut
9228
9155
-
Cys
GCA
[ENA]
¢þ
>WENV182846901
OKJU01000173
[OKJU] human gut metagenome; human gut
9344
9269
-
Gly
GCC
[ENA]
¢þ
>WENV182846909
OKJU01000206
[OKJU] human gut metagenome; human gut
11289
11364
+
His
GTG
[ENA]
¢þ
>WENV182846910
OKJU01000206
[OKJU] human gut metagenome; human gut
11389
11463
+
Gln
TTG
[ENA]
¢þ
>WENV182846904
OKJU01000180
[OKJU] human gut metagenome; human gut
12221
12297
+
Met
CAT
[ENA]
¢þ
>WENV182846905
OKJU01000180
[OKJU] human gut metagenome; human gut
12306
12390
+
Leu
TAG
[ENA]
¢þ
>WENV182846906
OKJU01000180
[OKJU] human gut metagenome; human gut
12414
12488
+
Gln
TTG
[ENA]
¢þ
>WENV182846907
OKJU01000180
[OKJU] human gut metagenome; human gut
12525
12599
+
Gln
TTG
[ENA]
¢þ
>WENV182846908
OKJU01000180
[OKJU] human gut metagenome; human gut
12623
12699
+
Met
CAT
[ENA]
¢þ
>WENV182846880
OKJU01000051
[OKJU] human gut metagenome; human gut
12771
12684
-
Ser
TGA
[ENA]
¢þ
>WENV182846900
OKJU01000160
[OKJU] human gut metagenome; human gut
13212
13136
-
Pro
TGG
[ENA]
¢þ
>WENV182846899
OKJU01000160
[OKJU] human gut metagenome; human gut
13341
13255
-
Leu
CAG
[ENA]
¢þ
>WENV182846898
OKJU01000160
[OKJU] human gut metagenome; human gut
13440
13365
-
His
GTG
[ENA]
¢þ
>WENV182846876
OKJU01000034
[OKJU] human gut metagenome; human gut
13492
13568
+
Pro
GGG
[ENA]
¢þ
>WENV182846897
OKJU01000160
[OKJU] human gut metagenome; human gut
13572
13496
-
Arg
CCG
[ENA]
¢þ
>WENV182846883
OKJU01000085
[OKJU] human gut metagenome; human gut
13644
13560
-
Leu
TAG
[ENA]
¢þ
>WENV182846896
OKJU01000153
[OKJU] human gut metagenome; human gut
14031
14123
+
Ser
GCT
[ENA]
¢þ
>WENV182846867
OKJU01000007
[OKJU] human gut metagenome; human gut
15334
15245
-
Ser
CGA
[ENA]
¢þ
>WENV182846863
OKJU01000007
[OKJU] human gut metagenome; human gut
16326
16401
+
Asn
GTT
[ENA]
¢þ
>WENV182846868
OKJU01000008
[OKJU] human gut metagenome; human gut
17379
17305
-
Arg
CCT
[ENA]
¢þ
>WENV182846885
OKJU01000102
[OKJU] human gut metagenome; human gut
17968
17892
-
Arg
TCT
[ENA]
¢þ
>WENV182846881
OKJU01000080
[OKJU] human gut metagenome; human gut
21466
21550
+
Tyr
GTA
[ENA]
¢þ
>WENV182846864
OKJU01000007
[OKJU] human gut metagenome; human gut
21566
21641
+
Asn
GTT
[ENA]
¢þ
>WENV182846882
OKJU01000080
[OKJU] human gut metagenome; human gut
21766
21850
+
Tyr
GTA
[ENA]
¢þ
>WENV182846869
OKJU01000010
[OKJU] human gut metagenome; human gut
27687
27762
+
Phe
GAA
[ENA]
¢þ
>WENV182846879
OKJU01000040
[OKJU] human gut metagenome; human gut
30441
30366
-
Thr
CGT
[ENA]
¢þ
>WENV182846866
OKJU01000007
[OKJU] human gut metagenome; human gut
30564
30489
-
Asn
GTT
[ENA]
¢þ
>WENV182846865
OKJU01000007
[OKJU] human gut metagenome; human gut
32322
32397
+
Asn
GTT
[ENA]
¢þ
>WENV182846872
OKJU01000024
[OKJU] human gut metagenome; human gut
36880
36954
+
Ile2
CAT
[ENA]
¢þ
>WENV182846878
OKJU01000035
[OKJU] human gut metagenome; human gut
38144
38069
-
Trp
CCA
[ENA]
¢þ
>WENV182846877
OKJU01000035
[OKJU] human gut metagenome; human gut
38274
38198
-
Asp
GTC
[ENA]
¢þ
>WENV182846875
OKJU01000032
[OKJU] human gut metagenome; human gut
40275
40200
-
Ile2
CAT
[ENA]
¢þ
>WENV182846871
OKJU01000013
[OKJU] human gut metagenome; human gut
53045
52972
-
Gly
CCC
[ENA]
¢þ
>WENV182846870
OKJU01000012
[OKJU] human gut metagenome; human gut
56986
56910
-
Val
GAC
[ENA]
¢þ
>WENV182846862
OKJU01000006
[OKJU] human gut metagenome; human gut
69150
69075
-
Lys
TTT
[ENA]
¢þ
>WENV182846861
OKJU01000006
[OKJU] human gut metagenome; human gut
69372
69297
-
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK