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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OKJW] human gut metagenome; human gut
HIT:
152 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182847305
OKJW01000591
[OKJW] human gut metagenome; human gut
1
76
+
Ile2
CAT
[ENA]
¢þ
>WENV182847283
OKJW01000522
[OKJW] human gut metagenome; human gut
9
85
+
Pro
CGG
[ENA]
¢þ
>WENV182847276
OKJW01000479
[OKJW] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182847267
OKJW01000368
[OKJW] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182847196
OKJW01000063
[OKJW] human gut metagenome; human gut
134
60
-
Gln
TTG
[ENA]
¢þ
>WENV182847277
OKJW01000479
[OKJW] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182847306
OKJW01000654
[OKJW] human gut metagenome; human gut
150
58
-
Ser
GCT
[ENA]
¢þ
>WENV182847316
OKJW01001747
[OKJW] human gut metagenome; human gut
166
91
-
Lys
TTT
[ENA]
¢þ
>WENV182847195
OKJW01000063
[OKJW] human gut metagenome; human gut
213
138
-
His
GTG
[ENA]
¢þ
>WENV182847278
OKJW01000479
[OKJW] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182847320
OKJW01003402
[OKJW] human gut metagenome; human gut
282
368
+
Leu
GAG
[ENA]
¢þ
>WENV182847319
OKJW01002476
[OKJW] human gut metagenome; human gut
296
371
+
Phe
GAA
[ENA]
¢þ
>WENV182847279
OKJW01000479
[OKJW] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182847322
OKJW01003962
[OKJW] human gut metagenome; human gut
364
440
+
Arg
TCT
[ENA]
¢þ
>WENV182847280
OKJW01000479
[OKJW] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182847321
OKJW01003807
[OKJW] human gut metagenome; human gut
417
511
+
SeC
TCA
[ENA]
¢þ
>WENV182847311
OKJW01001619
[OKJW] human gut metagenome; human gut
450
526
+
Ile
GAT
[ENA]
¢þ
>WENV182847309
OKJW01000992
[OKJW] human gut metagenome; human gut
474
398
-
Arg
ACG
[ENA]
¢þ
>WENV182847310
OKJW01001334
[OKJW] human gut metagenome; human gut
477
390
-
Ser
TGA
[ENA]
¢þ
>WENV182847235
OKJW01000239
[OKJW] human gut metagenome; human gut
501
418
-
Leu
CAG
[ENA]
¢þ
>WENV182847281
OKJW01000479
[OKJW] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182847324
OKJW01004280
[OKJW] human gut metagenome; human gut
510
435
-
Ala
TGC
[ENA]
¢þ
>WENV182847323
OKJW01004103
[OKJW] human gut metagenome; human gut
510
584
+
Arg
CCT
[ENA]
¢þ
>WENV182847312
OKJW01001619
[OKJW] human gut metagenome; human gut
569
644
+
Ala
TGC
[ENA]
¢þ
>WENV182847308
OKJW01000992
[OKJW] human gut metagenome; human gut
584
508
-
Arg
ACG
[ENA]
¢þ
>WENV182847301
OKJW01000550
[OKJW] human gut metagenome; human gut
626
714
+
Ser
CGA
[ENA]
¢þ
>WENV182847282
OKJW01000479
[OKJW] human gut metagenome; human gut
667
740
+
Pro
TGG
[ENA]
¢þ
>WENV182847238
OKJW01000242
[OKJW] human gut metagenome; human gut
668
593
-
Val
TAC
[ENA]
¢þ
>WENV182847317
OKJW01001905
[OKJW] human gut metagenome; human gut
688
761
+
Thr
CGT
[ENA]
¢þ
>WENV182847237
OKJW01000242
[OKJW] human gut metagenome; human gut
750
676
-
Glu
TTC
[ENA]
¢þ
>WENV182847304
OKJW01000585
[OKJW] human gut metagenome; human gut
765
840
+
Phe
GAA
[ENA]
¢þ
>WENV182847307
OKJW01000992
[OKJW] human gut metagenome; human gut
783
708
-
Trp
CCA
[ENA]
¢þ
>WENV182847236
OKJW01000242
[OKJW] human gut metagenome; human gut
830
755
-
Asn
GTT
[ENA]
¢þ
>WENV182847265
OKJW01000342
[OKJW] human gut metagenome; human gut
1038
963
-
Lys
CTT
[ENA]
¢þ
>WENV182847318
OKJW01002473
[OKJW] human gut metagenome; human gut
1041
968
-
Gly
CCC
[ENA]
¢þ
>WENV182847253
OKJW01000302
[OKJW] human gut metagenome; human gut
1079
1004
-
Thr
CGT
[ENA]
¢þ
>WENV182847313
OKJW01001729
[OKJW] human gut metagenome; human gut
1108
1183
+
Thr
TGT
[ENA]
¢þ
>WENV182847314
OKJW01001729
[OKJW] human gut metagenome; human gut
1192
1276
+
Tyr
GTA
[ENA]
¢þ
>WENV182847199
OKJW01000070
[OKJW] human gut metagenome; human gut
1241
1147
-
SeC
TCA
[ENA]
¢þ
>WENV182847315
OKJW01001729
[OKJW] human gut metagenome; human gut
1393
1467
+
Gly
TCC
[ENA]
¢þ
>WENV182847264
OKJW01000341
[OKJW] human gut metagenome; human gut
1610
1536
-
Gln
CTG
[ENA]
¢þ
>WENV182847191
OKJW01000017
[OKJW] human gut metagenome; human gut
1704
1628
-
Met
CAT
[ENA]
¢þ
>WENV182847268
OKJW01000372
[OKJW] human gut metagenome; human gut
1707
1636
-
Trp
CCA
[ENA]
¢þ
>WENV182847263
OKJW01000341
[OKJW] human gut metagenome; human gut
1722
1648
-
Gln
CTG
[ENA]
¢þ
>WENV182847190
OKJW01000017
[OKJW] human gut metagenome; human gut
1789
1714
-
Thr
GGT
[ENA]
¢þ
>WENV182847262
OKJW01000341
[OKJW] human gut metagenome; human gut
1847
1771
-
Met
CAT
[ENA]
¢þ
>WENV182847189
OKJW01000017
[OKJW] human gut metagenome; human gut
1877
1802
-
fMet
CAT
[ENA]
¢þ
>WENV182847261
OKJW01000341
[OKJW] human gut metagenome; human gut
1937
1863
-
Gln
TTG
[ENA]
¢þ
>WENV182847188
OKJW01000017
[OKJW] human gut metagenome; human gut
1967
1883
-
Tyr
GTA
[ENA]
¢þ
>WENV182847260
OKJW01000341
[OKJW] human gut metagenome; human gut
2046
1972
-
Gln
TTG
[ENA]
¢þ
>WENV182847187
OKJW01000017
[OKJW] human gut metagenome; human gut
2051
1976
-
Thr
TGT
[ENA]
¢þ
>WENV182847259
OKJW01000341
[OKJW] human gut metagenome; human gut
2154
2070
-
Leu
TAG
[ENA]
¢þ
>WENV182847258
OKJW01000341
[OKJW] human gut metagenome; human gut
2239
2163
-
Met
CAT
[ENA]
¢þ
>WENV182847252
OKJW01000291
[OKJW] human gut metagenome; human gut
2374
2449
+
Asn
GTT
[ENA]
¢þ
>WENV182847257
OKJW01000332
[OKJW] human gut metagenome; human gut
2414
2339
-
Arg
CCT
[ENA]
¢þ
>WENV182847251
OKJW01000288
[OKJW] human gut metagenome; human gut
2532
2619
+
Ser
TGA
[ENA]
¢þ
>WENV182847300
OKJW01000529
[OKJW] human gut metagenome; human gut
3034
2961
-
Glu
TTC
[ENA]
¢þ
>WENV182847303
OKJW01000575
[OKJW] human gut metagenome; human gut
3049
3122
+
Gly
CCC
[ENA]
¢þ
>WENV182847299
OKJW01000529
[OKJW] human gut metagenome; human gut
3137
3048
-
Ser
GCT
[ENA]
¢þ
>WENV182847298
OKJW01000529
[OKJW] human gut metagenome; human gut
3221
3146
-
Ile
GAT
[ENA]
¢þ
>WENV182847297
OKJW01000529
[OKJW] human gut metagenome; human gut
3300
3230
-
Gly
TCC
[ENA]
¢þ
>WENV182847296
OKJW01000529
[OKJW] human gut metagenome; human gut
3388
3311
-
Phe
GAA
[ENA]
¢þ
>WENV182847275
OKJW01000438
[OKJW] human gut metagenome; human gut
3435
3360
-
Ala
GGC
[ENA]
¢þ
>WENV182847206
OKJW01000087
[OKJW] human gut metagenome; human gut
3465
3390
-
Ala
GGC
[ENA]
¢þ
>WENV182847295
OKJW01000529
[OKJW] human gut metagenome; human gut
3467
3392
-
Asp
GTC
[ENA]
¢þ
>WENV182847274
OKJW01000438
[OKJW] human gut metagenome; human gut
3550
3475
-
Ala
GGC
[ENA]
¢þ
>WENV182847294
OKJW01000529
[OKJW] human gut metagenome; human gut
3589
3514
-
fMet
CAT
[ENA]
¢þ
>WENV182847271
OKJW01000433
[OKJW] human gut metagenome; human gut
3621
3535
-
Leu
TAA
[ENA]
¢þ
>WENV182847270
OKJW01000433
[OKJW] human gut metagenome; human gut
3707
3634
-
Cys
GCA
[ENA]
¢þ
>WENV182847293
OKJW01000529
[OKJW] human gut metagenome; human gut
3711
3622
-
Ser
TGA
[ENA]
¢þ
>WENV182847302
OKJW01000574
[OKJW] human gut metagenome; human gut
3740
3666
-
Lys
CTT
[ENA]
¢þ
>WENV182847292
OKJW01000529
[OKJW] human gut metagenome; human gut
3796
3723
-
Glu
TTC
[ENA]
¢þ
>WENV182847269
OKJW01000433
[OKJW] human gut metagenome; human gut
3836
3761
-
Gly
GCC
[ENA]
¢þ
>WENV182847291
OKJW01000529
[OKJW] human gut metagenome; human gut
3884
3809
-
Ile
GAT
[ENA]
¢þ
>WENV182847290
OKJW01000529
[OKJW] human gut metagenome; human gut
3963
3893
-
Gly
TCC
[ENA]
¢þ
>WENV182847289
OKJW01000529
[OKJW] human gut metagenome; human gut
4041
3965
-
Asp
GTC
[ENA]
¢þ
>WENV182847288
OKJW01000529
[OKJW] human gut metagenome; human gut
4154
4079
-
fMet
CAT
[ENA]
¢þ
>WENV182847239
OKJW01000274
[OKJW] human gut metagenome; human gut
4269
4181
-
Ser
TGA
[ENA]
¢þ
>WENV182847287
OKJW01000529
[OKJW] human gut metagenome; human gut
4276
4187
-
Ser
TGA
[ENA]
¢þ
>WENV182847255
OKJW01000322
[OKJW] human gut metagenome; human gut
4347
4272
-
Asn
GTT
[ENA]
¢þ
>WENV182847286
OKJW01000529
[OKJW] human gut metagenome; human gut
4384
4309
-
Ile2
CAT
[ENA]
¢þ
>WENV182847285
OKJW01000529
[OKJW] human gut metagenome; human gut
4478
4403
-
Met
CAT
[ENA]
¢þ
>WENV182847284
OKJW01000529
[OKJW] human gut metagenome; human gut
4573
4499
-
Ala
TGC
[ENA]
¢þ
>WENV182847226
OKJW01000199
[OKJW] human gut metagenome; human gut
5297
5373
+
Pro
GGG
[ENA]
¢þ
>WENV182847220
OKJW01000153
[OKJW] human gut metagenome; human gut
5304
5394
+
Ser
GGA
[ENA]
¢þ
>WENV182847254
OKJW01000322
[OKJW] human gut metagenome; human gut
5339
5428
+
Ser
CGA
[ENA]
¢þ
>WENV182847240
OKJW01000276
[OKJW] human gut metagenome; human gut
5713
5787
+
Arg
CCT
[ENA]
¢þ
>WENV182847225
OKJW01000197
[OKJW] human gut metagenome; human gut
5986
5914
-
Thr
CGT
[ENA]
¢þ
>WENV182847272
OKJW01000438
[OKJW] human gut metagenome; human gut
6249
6324
+
Val
TAC
[ENA]
¢þ
>WENV182847273
OKJW01000438
[OKJW] human gut metagenome; human gut
6371
6446
+
Val
TAC
[ENA]
¢þ
>WENV182847234
OKJW01000235
[OKJW] human gut metagenome; human gut
6693
6609
-
Tyr
GTA
[ENA]
¢þ
>WENV182847256
OKJW01000328
[OKJW] human gut metagenome; human gut
6694
6610
-
Leu
CAA
[ENA]
¢þ
>WENV182847183
OKJW01000009
[OKJW] human gut metagenome; human gut
6738
6662
-
Arg
TCT
[ENA]
¢þ
>WENV182847233
OKJW01000235
[OKJW] human gut metagenome; human gut
6811
6727
-
Tyr
GTA
[ENA]
¢þ
>WENV182847182
OKJW01000009
[OKJW] human gut metagenome; human gut
7051
6978
-
Gly
TCC
[ENA]
¢þ
>WENV182847181
OKJW01000009
[OKJW] human gut metagenome; human gut
7137
7061
-
Pro
TGG
[ENA]
¢þ
>WENV182847266
OKJW01000361
[OKJW] human gut metagenome; human gut
7212
7302
+
Ser
GCT
[ENA]
¢þ
>WENV182847222
OKJW01000174
[OKJW] human gut metagenome; human gut
8761
8837
+
Arg
TCT
[ENA]
¢þ
>WENV182847205
OKJW01000080
[OKJW] human gut metagenome; human gut
9570
9494
-
fMet
CAT
[ENA]
¢þ
>WENV182847250
OKJW01000284
[OKJW] human gut metagenome; human gut
9813
9724
-
Ser
CGA
[ENA]
¢þ
>WENV182847249
OKJW01000280
[OKJW] human gut metagenome; human gut
11297
11212
-
Leu
CAA
[ENA]
¢þ
>WENV182847248
OKJW01000280
[OKJW] human gut metagenome; human gut
11380
11310
-
Cys
GCA
[ENA]
¢þ
>WENV182847247
OKJW01000280
[OKJW] human gut metagenome; human gut
11478
11405
-
Gln
TTG
[ENA]
¢þ
>WENV182847192
OKJW01000026
[OKJW] human gut metagenome; human gut
11487
11561
+
Arg
CCG
[ENA]
¢þ
>WENV182847246
OKJW01000280
[OKJW] human gut metagenome; human gut
11564
11491
-
His
GTG
[ENA]
¢þ
>WENV182847245
OKJW01000280
[OKJW] human gut metagenome; human gut
11674
11601
-
Trp
CCA
[ENA]
¢þ
>WENV182847244
OKJW01000280
[OKJW] human gut metagenome; human gut
11760
11678
-
Tyr
GTA
[ENA]
¢þ
>WENV182847243
OKJW01000280
[OKJW] human gut metagenome; human gut
11837
11765
-
Phe
GAA
[ENA]
¢þ
>WENV182847242
OKJW01000280
[OKJW] human gut metagenome; human gut
11958
11883
-
Asp
GTC
[ENA]
¢þ
>WENV182847241
OKJW01000280
[OKJW] human gut metagenome; human gut
12042
11968
-
Val
TAC
[ENA]
¢þ
>WENV182847204
OKJW01000080
[OKJW] human gut metagenome; human gut
13436
13350
-
Leu
GAG
[ENA]
¢þ
>WENV182847230
OKJW01000200
[OKJW] human gut metagenome; human gut
14019
13943
-
Pro
TGG
[ENA]
¢þ
>WENV182847229
OKJW01000200
[OKJW] human gut metagenome; human gut
14148
14062
-
Leu
CAG
[ENA]
¢þ
>WENV182847228
OKJW01000200
[OKJW] human gut metagenome; human gut
14244
14169
-
His
GTG
[ENA]
¢þ
>WENV182847232
OKJW01000217
[OKJW] human gut metagenome; human gut
14248
14173
-
Thr
CGT
[ENA]
¢þ
>WENV182847227
OKJW01000200
[OKJW] human gut metagenome; human gut
14379
14303
-
Arg
CCG
[ENA]
¢þ
>WENV182847224
OKJW01000192
[OKJW] human gut metagenome; human gut
15130
15057
-
Arg
CCG
[ENA]
¢þ
>WENV182847231
OKJW01000204
[OKJW] human gut metagenome; human gut
15624
15698
+
Ile2
CAT
[ENA]
¢þ
>WENV182847211
OKJW01000124
[OKJW] human gut metagenome; human gut
15793
15717
-
Asp
GTC
[ENA]
¢þ
>WENV182847223
OKJW01000180
[OKJW] human gut metagenome; human gut
15889
15814
-
Asn
GTT
[ENA]
¢þ
>WENV182847213
OKJW01000125
[OKJW] human gut metagenome; human gut
16119
16043
-
Val
GAC
[ENA]
¢þ
>WENV182847212
OKJW01000125
[OKJW] human gut metagenome; human gut
16200
16124
-
Val
GAC
[ENA]
¢þ
>WENV182847221
OKJW01000156
[OKJW] human gut metagenome; human gut
17707
17791
+
Leu
TAG
[ENA]
¢þ
>WENV182847201
OKJW01000075
[OKJW] human gut metagenome; human gut
20810
20737
-
Gln
TTG
[ENA]
¢þ
>WENV182847200
OKJW01000075
[OKJW] human gut metagenome; human gut
20900
20818
-
Tyr
GTA
[ENA]
¢þ
>WENV182847214
OKJW01000133
[OKJW] human gut metagenome; human gut
21579
21653
+
Gly
GCC
[ENA]
¢þ
>WENV182847215
OKJW01000133
[OKJW] human gut metagenome; human gut
21661
21736
+
Asn
GTT
[ENA]
¢þ
>WENV182847216
OKJW01000133
[OKJW] human gut metagenome; human gut
21771
21845
+
Gln
CTG
[ENA]
¢þ
>WENV182847217
OKJW01000133
[OKJW] human gut metagenome; human gut
21854
21929
+
Lys
TTT
[ENA]
¢þ
>WENV182847218
OKJW01000133
[OKJW] human gut metagenome; human gut
21936
22010
+
Glu
TTC
[ENA]
¢þ
>WENV182847219
OKJW01000133
[OKJW] human gut metagenome; human gut
22018
22093
+
Val
TAC
[ENA]
¢þ
>WENV182847207
OKJW01000100
[OKJW] human gut metagenome; human gut
22366
22291
-
Arg
TCT
[ENA]
¢þ
>WENV182847208
OKJW01000110
[OKJW] human gut metagenome; human gut
23951
24037
+
Leu
GAG
[ENA]
¢þ
>WENV182847210
OKJW01000124
[OKJW] human gut metagenome; human gut
24018
23942
-
Asp
GTC
[ENA]
¢þ
>WENV182847176
OKJW01000007
[OKJW] human gut metagenome; human gut
25364
25439
+
Asp
GTC
[ENA]
¢þ
>WENV182847177
OKJW01000007
[OKJW] human gut metagenome; human gut
25445
25520
+
Phe
GAA
[ENA]
¢þ
>WENV182847178
OKJW01000007
[OKJW] human gut metagenome; human gut
25526
25600
+
Gly
GCC
[ENA]
¢þ
>WENV182847179
OKJW01000007
[OKJW] human gut metagenome; human gut
25608
25682
+
Cys
GCA
[ENA]
¢þ
>WENV182847209
OKJW01000112
[OKJW] human gut metagenome; human gut
25628
25704
+
Arg
CCT
[ENA]
¢þ
>WENV182847180
OKJW01000007
[OKJW] human gut metagenome; human gut
25698
25786
+
Leu
TAA
[ENA]
¢þ
>WENV182847186
OKJW01000017
[OKJW] human gut metagenome; human gut
26923
26838
-
Leu
GAG
[ENA]
¢þ
>WENV182847185
OKJW01000017
[OKJW] human gut metagenome; human gut
27016
26941
-
Phe
GAA
[ENA]
¢þ
>WENV182847184
OKJW01000017
[OKJW] human gut metagenome; human gut
27137
27062
-
Asp
GTC
[ENA]
¢þ
>WENV182847197
OKJW01000068
[OKJW] human gut metagenome; human gut
28483
28411
-
Thr
GGT
[ENA]
¢þ
>WENV182847203
OKJW01000079
[OKJW] human gut metagenome; human gut
29718
29642
-
Arg
ACG
[ENA]
¢þ
>WENV182847202
OKJW01000079
[OKJW] human gut metagenome; human gut
29858
29782
-
Arg
ACG
[ENA]
¢þ
>WENV182847198
OKJW01000069
[OKJW] human gut metagenome; human gut
30080
30005
-
Asn
GTT
[ENA]
¢þ
>WENV182847194
OKJW01000045
[OKJW] human gut metagenome; human gut
34739
34652
-
Ser
GGA
[ENA]
¢þ
>WENV182847193
OKJW01000030
[OKJW] human gut metagenome; human gut
41745
41670
-
Phe
GAA
[ENA]
¢þ
>WENV182847175
OKJW01000004
[OKJW] human gut metagenome; human gut
42849
42762
-
Ser
GGA
[ENA]
¢þ
>WENV182847173
OKJW01000001
[OKJW] human gut metagenome; human gut
57138
57221
+
Leu
CAA
[ENA]
¢þ
>WENV182847174
OKJW01000003
[OKJW] human gut metagenome; human gut
61215
61142
-
Gly
CCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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