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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[OKKL] human gut metagenome; human gut
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182848883
OKKL01001768
[OKKL] human gut metagenome; human gut
47
122
+
Trp
CCA
[ENA]
¢þ
>WENV182848876
OKKL01001008
[OKKL] human gut metagenome; human gut
72
147
+
Thr
GGT
[ENA]
¢þ
>WENV182848888
OKKL01002112
[OKKL] human gut metagenome; human gut
225
131
-
SeC
TCA
[ENA]
¢þ
>WENV182848890
OKKL01002634
[OKKL] human gut metagenome; human gut
328
403
+
Thr
TGT
[ENA]
¢þ
>WENV182848891
OKKL01002634
[OKKL] human gut metagenome; human gut
412
496
+
Tyr
GTA
[ENA]
¢þ
>WENV182848868
OKKL01000390
[OKKL] human gut metagenome; human gut
425
350
-
Thr
CGT
[ENA]
¢þ
>WENV182848878
OKKL01001217
[OKKL] human gut metagenome; human gut
473
399
-
Arg
CCT
[ENA]
¢þ
>WENV182848889
OKKL01002401
[OKKL] human gut metagenome; human gut
487
411
-
Arg
TCT
[ENA]
¢þ
>WENV182848879
OKKL01001387
[OKKL] human gut metagenome; human gut
556
643
+
Ser
GGA
[ENA]
¢þ
>WENV182848870
OKKL01000460
[OKKL] human gut metagenome; human gut
576
651
+
Phe
GAA
[ENA]
¢þ
>WENV182848887
OKKL01001935
[OKKL] human gut metagenome; human gut
610
535
-
Ala
GGC
[ENA]
¢þ
>WENV182848871
OKKL01000691
[OKKL] human gut metagenome; human gut
617
541
-
fMet
CAT
[ENA]
¢þ
>WENV182848884
OKKL01001784
[OKKL] human gut metagenome; human gut
676
751
+
Asn
GTT
[ENA]
¢þ
>WENV182848880
OKKL01001611
[OKKL] human gut metagenome; human gut
726
801
+
Ile2
CAT
[ENA]
¢þ
>WENV182848886
OKKL01001935
[OKKL] human gut metagenome; human gut
729
653
-
Ile
GAT
[ENA]
¢þ
>WENV182848885
OKKL01001784
[OKKL] human gut metagenome; human gut
754
829
+
Thr
TGT
[ENA]
¢þ
>WENV182848877
OKKL01001135
[OKKL] human gut metagenome; human gut
795
871
+
Pro
GGG
[ENA]
¢þ
>WENV182848881
OKKL01001611
[OKKL] human gut metagenome; human gut
809
885
+
Arg
TCG
[ENA]
¢þ
>WENV182848872
OKKL01000865
[OKKL] human gut metagenome; human gut
813
738
-
Asn
GTT
[ENA]
¢þ
>WENV182848882
OKKL01001611
[OKKL] human gut metagenome; human gut
899
975
+
Arg
TCT
[ENA]
¢þ
>WENV182848869
OKKL01000439
[OKKL] human gut metagenome; human gut
932
1007
+
Gly
GCC
[ENA]
¢þ
>WENV182848873
OKKL01000970
[OKKL] human gut metagenome; human gut
1325
1401
+
Val
GAC
[ENA]
¢þ
>WENV182848874
OKKL01000970
[OKKL] human gut metagenome; human gut
1406
1482
+
Val
GAC
[ENA]
¢þ
>WENV182848875
OKKL01000997
[OKKL] human gut metagenome; human gut
1489
1403
-
Leu
TAA
[ENA]
¢þ
>WENV182848861
OKKL01000197
[OKKL] human gut metagenome; human gut
1711
1795
+
Leu
CAA
[ENA]
¢þ
>WENV182848864
OKKL01000263
[OKKL] human gut metagenome; human gut
1999
2073
+
Asn
GTT
[ENA]
¢þ
>WENV182848865
OKKL01000263
[OKKL] human gut metagenome; human gut
2079
2154
+
Thr
TGT
[ENA]
¢þ
>WENV182848866
OKKL01000293
[OKKL] human gut metagenome; human gut
2143
2218
+
Val
TAC
[ENA]
¢þ
>WENV182848867
OKKL01000293
[OKKL] human gut metagenome; human gut
2223
2298
+
Lys
TTT
[ENA]
¢þ
>WENV182848863
OKKL01000223
[OKKL] human gut metagenome; human gut
2828
2736
-
Ser
GCT
[ENA]
¢þ
>WENV182848862
OKKL01000214
[OKKL] human gut metagenome; human gut
2852
2768
-
Tyr
GTA
[ENA]
¢þ
>WENV182848856
OKKL01000081
[OKKL] human gut metagenome; human gut
3322
3408
+
Leu
CAG
[ENA]
¢þ
>WENV182848857
OKKL01000081
[OKKL] human gut metagenome; human gut
3451
3527
+
Pro
TGG
[ENA]
¢þ
>WENV182848859
OKKL01000154
[OKKL] human gut metagenome; human gut
3465
3390
-
Ile2
CAT
[ENA]
¢þ
>WENV182848860
OKKL01000162
[OKKL] human gut metagenome; human gut
3922
3995
+
Gly
CCC
[ENA]
¢þ
>WENV182848858
OKKL01000086
[OKKL] human gut metagenome; human gut
4916
4841
-
Glu
TTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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