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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OKMB] human gut metagenome; human gut
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182852744
OKMB01000879
[OKMB] human gut metagenome; human gut
74
148
+
Gly
GCC
[ENA]
¢þ
>WENV182852736
OKMB01000767
[OKMB] human gut metagenome; human gut
74
148
+
Phe
GAA
[ENA]
¢þ
>WENV182852745
OKMB01000879
[OKMB] human gut metagenome; human gut
160
248
+
Leu
TAA
[ENA]
¢þ
>WENV182852737
OKMB01000767
[OKMB] human gut metagenome; human gut
161
234
+
His
GTG
[ENA]
¢þ
>WENV182852738
OKMB01000767
[OKMB] human gut metagenome; human gut
245
316
+
Gln
TTG
[ENA]
¢þ
>WENV182852746
OKMB01000879
[OKMB] human gut metagenome; human gut
261
337
+
Arg
ACG
[ENA]
¢þ
>WENV182852739
OKMB01000767
[OKMB] human gut metagenome; human gut
322
395
+
Cys
GCA
[ENA]
¢þ
>WENV182852747
OKMB01000879
[OKMB] human gut metagenome; human gut
364
438
+
Pro
TGG
[ENA]
¢þ
>WENV182852742
OKMB01000868
[OKMB] human gut metagenome; human gut
366
452
+
Leu
GAG
[ENA]
¢þ
>WENV182852748
OKMB01000879
[OKMB] human gut metagenome; human gut
452
527
+
Ala
TGC
[ENA]
¢þ
>WENV182852743
OKMB01000868
[OKMB] human gut metagenome; human gut
474
547
+
Gly
TCC
[ENA]
¢þ
>WENV182852740
OKMB01000767
[OKMB] human gut metagenome; human gut
520
603
+
Leu
CAA
[ENA]
¢þ
>WENV182852741
OKMB01000798
[OKMB] human gut metagenome; human gut
610
520
-
Ser
GGA
[ENA]
¢þ
>WENV182852735
OKMB01000052
[OKMB] human gut metagenome; human gut
6014
5943
-
Arg
CCG
[ENA]
¢þ
>WENV182852734
OKMB01000015
[OKMB] human gut metagenome; human gut
7765
7857
+
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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