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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKMO] human gut metagenome; human gut
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182853988
OKMO01001338
[OKMO] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¢þ
>WENV182853935
OKMO01000016
[OKMO] human gut metagenome; human gut
83
7
-
Arg
ACG
[ENA]
¢þ
>WENV182853989
OKMO01001338
[OKMO] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¢þ
>WENV182853950
OKMO01000054
[OKMO] human gut metagenome; human gut
166
91
-
Lys
TTT
[ENA]
¢þ
>WENV182853934
OKMO01000016
[OKMO] human gut metagenome; human gut
179
87
-
Ser
GCT
[ENA]
¢þ
>WENV182853987
OKMO01001021
[OKMO] human gut metagenome; human gut
213
140
-
Lys
TTT
[ENA]
¢þ
>WENV182853969
OKMO01000258
[OKMO] human gut metagenome; human gut
379
304
-
Thr
GGT
[ENA]
¢þ
>WENV182853990
OKMO01001466
[OKMO] human gut metagenome; human gut
432
506
+
Leu
TAA
[ENA]
¢þ
>WENV182853968
OKMO01000258
[OKMO] human gut metagenome; human gut
460
386
-
Gly
TCC
[ENA]
¢þ
>WENV182853984
OKMO01000821
[OKMO] human gut metagenome; human gut
491
416
-
Arg
TCT
[ENA]
¢þ
>WENV182853983
OKMO01000768
[OKMO] human gut metagenome; human gut
557
484
-
Arg
CCG
[ENA]
¢þ
>WENV182853971
OKMO01000463
[OKMO] human gut metagenome; human gut
587
515
-
Thr
GGT
[ENA]
¢þ
>WENV182853967
OKMO01000258
[OKMO] human gut metagenome; human gut
661
577
-
Tyr
GTA
[ENA]
¢þ
>WENV182853945
OKMO01000037
[OKMO] human gut metagenome; human gut
737
812
+
Ala
GGC
[ENA]
¢þ
>WENV182853966
OKMO01000258
[OKMO] human gut metagenome; human gut
745
670
-
Thr
TGT
[ENA]
¢þ
>WENV182853970
OKMO01000393
[OKMO] human gut metagenome; human gut
814
889
+
Arg
CCT
[ENA]
¢þ
>WENV182853982
OKMO01000678
[OKMO] human gut metagenome; human gut
849
776
-
Glu
TTC
[ENA]
¢þ
>WENV182853981
OKMO01000678
[OKMO] human gut metagenome; human gut
936
863
-
Ile
GAT
[ENA]
¢þ
>WENV182853986
OKMO01000892
[OKMO] human gut metagenome; human gut
948
1023
+
Glu
TTC
[ENA]
¢þ
>WENV182853980
OKMO01000678
[OKMO] human gut metagenome; human gut
1020
950
-
Gly
TCC
[ENA]
¢þ
>WENV182853954
OKMO01000077
[OKMO] human gut metagenome; human gut
1021
937
-
Leu
CAA
[ENA]
¢þ
>WENV182853953
OKMO01000068
[OKMO] human gut metagenome; human gut
1087
1011
-
Arg
TCT
[ENA]
¢þ
>WENV182853979
OKMO01000678
[OKMO] human gut metagenome; human gut
1098
1022
-
Asp
GTC
[ENA]
¢þ
>WENV182853985
OKMO01000868
[OKMO] human gut metagenome; human gut
1106
1019
-
Leu
CAG
[ENA]
¢þ
>WENV182853978
OKMO01000678
[OKMO] human gut metagenome; human gut
1221
1146
-
fMet
CAT
[ENA]
¢þ
>WENV182853977
OKMO01000678
[OKMO] human gut metagenome; human gut
1343
1254
-
Ser
TGA
[ENA]
¢þ
>WENV182853976
OKMO01000678
[OKMO] human gut metagenome; human gut
1451
1376
-
Ile2
CAT
[ENA]
¢þ
>WENV182853975
OKMO01000678
[OKMO] human gut metagenome; human gut
1545
1470
-
Met
CAT
[ENA]
¢þ
>WENV182853974
OKMO01000678
[OKMO] human gut metagenome; human gut
1640
1568
-
Ala
TGC
[ENA]
¢þ
>WENV182853944
OKMO01000031
[OKMO] human gut metagenome; human gut
1806
1720
-
Leu
CAG
[ENA]
¢þ
>WENV182853956
OKMO01000134
[OKMO] human gut metagenome; human gut
1839
1752
-
Ser
GGA
[ENA]
¢þ
>WENV182853973
OKMO01000496
[OKMO] human gut metagenome; human gut
2202
2127
-
Ala
TGC
[ENA]
¢þ
>WENV182853972
OKMO01000496
[OKMO] human gut metagenome; human gut
2321
2245
-
Ile
GAT
[ENA]
¢þ
>WENV182853965
OKMO01000182
[OKMO] human gut metagenome; human gut
2473
2559
+
Leu
GAG
[ENA]
¢þ
>WENV182853957
OKMO01000159
[OKMO] human gut metagenome; human gut
3358
3432
+
Val
TAC
[ENA]
¢þ
>WENV182853958
OKMO01000159
[OKMO] human gut metagenome; human gut
3437
3511
+
Lys
TTT
[ENA]
¢þ
>WENV182853959
OKMO01000159
[OKMO] human gut metagenome; human gut
3526
3609
+
Leu
TAG
[ENA]
¢þ
>WENV182853960
OKMO01000159
[OKMO] human gut metagenome; human gut
3615
3690
+
Thr
TGT
[ENA]
¢þ
>WENV182853961
OKMO01000159
[OKMO] human gut metagenome; human gut
3695
3766
+
Gly
GCC
[ENA]
¢þ
>WENV182853962
OKMO01000159
[OKMO] human gut metagenome; human gut
3782
3867
+
Leu
TAA
[ENA]
¢þ
>WENV182853963
OKMO01000159
[OKMO] human gut metagenome; human gut
3882
3955
+
Arg
ACG
[ENA]
¢þ
>WENV182853964
OKMO01000159
[OKMO] human gut metagenome; human gut
3967
4040
+
Pro
TGG
[ENA]
¢þ
>WENV182853955
OKMO01000119
[OKMO] human gut metagenome; human gut
7981
8057
+
Asp
GTC
[ENA]
¢þ
>WENV182853937
OKMO01000019
[OKMO] human gut metagenome; human gut
8255
8179
-
Pro
GGG
[ENA]
¢þ
>WENV182853946
OKMO01000038
[OKMO] human gut metagenome; human gut
8488
8412
-
Pro
CGG
[ENA]
¢þ
>WENV182853910
OKMO01000001
[OKMO] human gut metagenome; human gut
10640
10566
-
Arg
CCT
[ENA]
¢þ
>WENV182853952
OKMO01000065
[OKMO] human gut metagenome; human gut
11067
11142
+
Phe
GAA
[ENA]
¢þ
>WENV182853926
OKMO01000012
[OKMO] human gut metagenome; human gut
16409
16325
-
Tyr
GTA
[ENA]
¢þ
>WENV182853913
OKMO01000003
[OKMO] human gut metagenome; human gut
17968
18043
+
Gly
GCC
[ENA]
¢þ
>WENV182853914
OKMO01000003
[OKMO] human gut metagenome; human gut
18097
18170
+
Cys
GCA
[ENA]
¢þ
>WENV182853915
OKMO01000003
[OKMO] human gut metagenome; human gut
18183
18269
+
Leu
TAA
[ENA]
¢þ
>WENV182853951
OKMO01000061
[OKMO] human gut metagenome; human gut
20907
20982
+
Thr
CGT
[ENA]
¢þ
>WENV182853917
OKMO01000006
[OKMO] human gut metagenome; human gut
27742
27667
-
Phe
GAA
[ENA]
¢þ
>WENV182853920
OKMO01000009
[OKMO] human gut metagenome; human gut
28905
28829
-
Val
GAC
[ENA]
¢þ
>WENV182853919
OKMO01000009
[OKMO] human gut metagenome; human gut
28986
28910
-
Val
GAC
[ENA]
¢þ
>WENV182853949
OKMO01000052
[OKMO] human gut metagenome; human gut
29373
29297
-
Arg
ACG
[ENA]
¢þ
>WENV182853948
OKMO01000052
[OKMO] human gut metagenome; human gut
29512
29436
-
Arg
ACG
[ENA]
¢þ
>WENV182853927
OKMO01000014
[OKMO] human gut metagenome; human gut
32302
32215
-
Ser
TGA
[ENA]
¢þ
>WENV182853947
OKMO01000048
[OKMO] human gut metagenome; human gut
32748
32842
+
SeC
TCA
[ENA]
¢þ
>WENV182853942
OKMO01000025
[OKMO] human gut metagenome; human gut
33889
33800
-
Ser
CGA
[ENA]
¢þ
>WENV182853938
OKMO01000025
[OKMO] human gut metagenome; human gut
34881
34956
+
Asn
GTT
[ENA]
¢þ
>WENV182853921
OKMO01000010
[OKMO] human gut metagenome; human gut
35855
35931
+
Met
CAT
[ENA]
¢þ
>WENV182853922
OKMO01000010
[OKMO] human gut metagenome; human gut
35940
36024
+
Leu
TAG
[ENA]
¢þ
>WENV182853923
OKMO01000010
[OKMO] human gut metagenome; human gut
36048
36122
+
Gln
TTG
[ENA]
¢þ
>WENV182853924
OKMO01000010
[OKMO] human gut metagenome; human gut
36138
36214
+
Met
CAT
[ENA]
¢þ
>WENV182853925
OKMO01000010
[OKMO] human gut metagenome; human gut
36262
36336
+
Gln
CTG
[ENA]
¢þ
>WENV182853936
OKMO01000017
[OKMO] human gut metagenome; human gut
41752
41828
+
fMet
CAT
[ENA]
¢þ
>WENV182853943
OKMO01000026
[OKMO] human gut metagenome; human gut
45431
45518
+
Ser
GGA
[ENA]
¢þ
>WENV182853941
OKMO01000025
[OKMO] human gut metagenome; human gut
48434
48359
-
Asn
GTT
[ENA]
¢þ
>WENV182853939
OKMO01000025
[OKMO] human gut metagenome; human gut
50183
50258
+
Asn
GTT
[ENA]
¢þ
>WENV182853933
OKMO01000015
[OKMO] human gut metagenome; human gut
51686
51610
-
Pro
TGG
[ENA]
¢þ
>WENV182853932
OKMO01000015
[OKMO] human gut metagenome; human gut
51815
51729
-
Leu
CAG
[ENA]
¢þ
>WENV182853931
OKMO01000015
[OKMO] human gut metagenome; human gut
51911
51836
-
His
GTG
[ENA]
¢þ
>WENV182853930
OKMO01000015
[OKMO] human gut metagenome; human gut
52046
51970
-
Arg
CCG
[ENA]
¢þ
>WENV182853940
OKMO01000025
[OKMO] human gut metagenome; human gut
52592
52667
+
Asn
GTT
[ENA]
¢þ
>WENV182853918
OKMO01000008
[OKMO] human gut metagenome; human gut
56499
56424
-
Ile2
CAT
[ENA]
¢þ
>WENV182853929
OKMO01000015
[OKMO] human gut metagenome; human gut
87466
87391
-
Trp
CCA
[ENA]
¢þ
>WENV182853928
OKMO01000015
[OKMO] human gut metagenome; human gut
87551
87475
-
Asp
GTC
[ENA]
¢þ
>WENV182853911
OKMO01000002
[OKMO] human gut metagenome; human gut
105418
105504
+
Leu
GAG
[ENA]
¢þ
>WENV182853912
OKMO01000002
[OKMO] human gut metagenome; human gut
109287
109363
+
fMet
CAT
[ENA]
¢þ
>WENV182853916
OKMO01000006
[OKMO] human gut metagenome; human gut
139058
139131
+
Gly
CCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK