This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKNB] human gut metagenome; human gut
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182855585
OKNB01002595
[OKNB] human gut metagenome; human gut
42
118
+
Arg
CCG
[ENA]
¢þ
>WENV182855580
OKNB01002481
[OKNB] human gut metagenome; human gut
64
137
+
Pro
TGG
[ENA]
¢þ
>WENV182855599
OKNB01002907
[OKNB] human gut metagenome; human gut
75
1
-
Arg
ACG
[ENA]
¢þ
>WENV182855593
OKNB01002643
[OKNB] human gut metagenome; human gut
75
2
-
Arg
ACG
[ENA]
¢þ
>WENV182855565
OKNB01000645
[OKNB] human gut metagenome; human gut
81
154
+
Phe
GAA
[ENA]
¢þ
>WENV182855576
OKNB01001948
[OKNB] human gut metagenome; human gut
112
28
-
Leu
CAA
[ENA]
¢þ
>WENV182855562
OKNB01000451
[OKNB] human gut metagenome; human gut
140
64
-
Ile
GAT
[ENA]
¢þ
>WENV182855581
OKNB01002481
[OKNB] human gut metagenome; human gut
154
229
+
Ala
TGC
[ENA]
¢þ
>WENV182855592
OKNB01002643
[OKNB] human gut metagenome; human gut
175
90
-
Leu
TAA
[ENA]
¢þ
>WENV182855598
OKNB01002907
[OKNB] human gut metagenome; human gut
176
88
-
Leu
TAA
[ENA]
¢þ
>WENV182855529
OKNB01000112
[OKNB] human gut metagenome; human gut
183
109
-
Gly
TCC
[ENA]
¢þ
>WENV182855586
OKNB01002595
[OKNB] human gut metagenome; human gut
186
260
+
His
GTG
[ENA]
¢þ
>WENV182855570
OKNB01000708
[OKNB] human gut metagenome; human gut
195
122
-
Asn
GTT
[ENA]
¢þ
>WENV182855509
OKNB01000045
[OKNB] human gut metagenome; human gut
230
148
-
Tyr
GTA
[ENA]
¢þ
>WENV182855582
OKNB01002481
[OKNB] human gut metagenome; human gut
254
328
+
Met
CAT
[ENA]
¢þ
>WENV182855597
OKNB01002907
[OKNB] human gut metagenome; human gut
262
188
-
Gly
GCC
[ENA]
¢þ
>WENV182855591
OKNB01002643
[OKNB] human gut metagenome; human gut
262
191
-
Gly
GCC
[ENA]
¢þ
>WENV182855587
OKNB01002595
[OKNB] human gut metagenome; human gut
283
369
+
Leu
CAG
[ENA]
¢þ
>WENV182855579
OKNB01002132
[OKNB] human gut metagenome; human gut
300
372
+
Val
CAC
[ENA]
¢þ
>WENV182855550
OKNB01000269
[OKNB] human gut metagenome; human gut
304
377
+
Thr
TGT
[ENA]
¢þ
>WENV182855590
OKNB01002643
[OKNB] human gut metagenome; human gut
342
267
-
Thr
TGT
[ENA]
¢þ
>WENV182855596
OKNB01002907
[OKNB] human gut metagenome; human gut
354
280
-
Lys
TTT
[ENA]
¢þ
>WENV182855583
OKNB01002481
[OKNB] human gut metagenome; human gut
355
428
+
Ile2
CAT
[ENA]
¢þ
>WENV182855594
OKNB01002898
[OKNB] human gut metagenome; human gut
366
293
-
Gly
CCC
[ENA]
¢þ
>WENV182855574
OKNB01001349
[OKNB] human gut metagenome; human gut
416
340
-
Pro
TGG
[ENA]
¢þ
>WENV182855589
OKNB01002643
[OKNB] human gut metagenome; human gut
431
348
-
Leu
TAG
[ENA]
¢þ
>WENV182855595
OKNB01002907
[OKNB] human gut metagenome; human gut
435
360
-
Thr
TGT
[ENA]
¢þ
>WENV182855584
OKNB01002481
[OKNB] human gut metagenome; human gut
437
528
+
Ser
TGA
[ENA]
¢þ
>WENV182855588
OKNB01002643
[OKNB] human gut metagenome; human gut
520
446
-
Lys
TTT
[ENA]
¢þ
>WENV182855575
OKNB01001885
[OKNB] human gut metagenome; human gut
526
600
+
Lys
CTT
[ENA]
¢þ
>WENV182855578
OKNB01002040
[OKNB] human gut metagenome; human gut
533
608
+
Asn
GTT
[ENA]
¢þ
>WENV182855525
OKNB01000094
[OKNB] human gut metagenome; human gut
618
691
+
Gly
CCC
[ENA]
¢þ
>WENV182855577
OKNB01001975
[OKNB] human gut metagenome; human gut
732
645
-
Ser
TGA
[ENA]
¢þ
>WENV182855535
OKNB01000151
[OKNB] human gut metagenome; human gut
744
671
-
Gly
TCC
[ENA]
¢þ
>WENV182855572
OKNB01000916
[OKNB] human gut metagenome; human gut
765
692
-
Glu
CTC
[ENA]
¢þ
>WENV182855534
OKNB01000151
[OKNB] human gut metagenome; human gut
852
766
-
Leu
GAG
[ENA]
¢þ
>WENV182855571
OKNB01000916
[OKNB] human gut metagenome; human gut
876
804
-
Gln
CTG
[ENA]
¢þ
>WENV182855546
OKNB01000225
[OKNB] human gut metagenome; human gut
935
1023
+
Ser
GCT
[ENA]
¢þ
>WENV182855528
OKNB01000112
[OKNB] human gut metagenome; human gut
1262
1336
+
Pro
TGG
[ENA]
¢þ
>WENV182855573
OKNB01000930
[OKNB] human gut metagenome; human gut
1447
1523
+
Leu
TAA
[ENA]
¢þ
>WENV182855558
OKNB01000342
[OKNB] human gut metagenome; human gut
1866
1941
+
Arg
CCT
[ENA]
¢þ
>WENV182855523
OKNB01000087
[OKNB] human gut metagenome; human gut
1950
1874
-
fMet
CAT
[ENA]
¢þ
>WENV182855566
OKNB01000687
[OKNB] human gut metagenome; human gut
2007
2083
+
Met
CAT
[ENA]
¢þ
>WENV182855530
OKNB01000115
[OKNB] human gut metagenome; human gut
2040
2115
+
Thr
CGT
[ENA]
¢þ
>WENV182855567
OKNB01000687
[OKNB] human gut metagenome; human gut
2092
2176
+
Leu
TAG
[ENA]
¢þ
>WENV182855569
OKNB01000707
[OKNB] human gut metagenome; human gut
2193
2117
-
Asp
GTC
[ENA]
¢þ
>WENV182855568
OKNB01000687
[OKNB] human gut metagenome; human gut
2200
2274
+
His
ATG
[ENA]
¢þ
>WENV182855563
OKNB01000527
[OKNB] human gut metagenome; human gut
2212
2137
-
Glu
TTC
[ENA]
¢þ
>WENV182855564
OKNB01000539
[OKNB] human gut metagenome; human gut
2816
2891
+
Arg
TCT
[ENA]
¢þ
>WENV182855500
OKNB01000025
[OKNB] human gut metagenome; human gut
3151
3225
+
Asn
GTT
[ENA]
¢þ
>WENV182855554
OKNB01000314
[OKNB] human gut metagenome; human gut
3221
3296
+
His
GTG
[ENA]
¢þ
>WENV182855501
OKNB01000025
[OKNB] human gut metagenome; human gut
3228
3318
+
Ser
GCT
[ENA]
¢þ
>WENV182855559
OKNB01000349
[OKNB] human gut metagenome; human gut
3342
3417
+
Val
TAC
[ENA]
¢þ
>WENV182855561
OKNB01000413
[OKNB] human gut metagenome; human gut
3537
3611
+
Leu
CAA
[ENA]
¢þ
>WENV182855560
OKNB01000385
[OKNB] human gut metagenome; human gut
4317
4391
+
Ile2
CAT
[ENA]
¢þ
>WENV182855545
OKNB01000179
[OKNB] human gut metagenome; human gut
5289
5201
-
Ser
CGA
[ENA]
¢þ
>WENV182855556
OKNB01000332
[OKNB] human gut metagenome; human gut
5292
5209
-
Leu
CAA
[ENA]
¢þ
>WENV182855557
OKNB01000336
[OKNB] human gut metagenome; human gut
5316
5243
-
Ala
TGC
[ENA]
¢þ
>WENV182855551
OKNB01000298
[OKNB] human gut metagenome; human gut
5611
5686
+
Thr
GGT
[ENA]
¢þ
>WENV182855552
OKNB01000298
[OKNB] human gut metagenome; human gut
5725
5798
+
Met
CAT
[ENA]
¢þ
>WENV182855555
OKNB01000314
[OKNB] human gut metagenome; human gut
5759
5834
+
Lys
CTT
[ENA]
¢þ
>WENV182855553
OKNB01000298
[OKNB] human gut metagenome; human gut
5937
6010
+
Trp
CCA
[ENA]
¢þ
>WENV182855549
OKNB01000265
[OKNB] human gut metagenome; human gut
6939
6866
-
Pro
TGG
[ENA]
¢þ
>WENV182855548
OKNB01000250
[OKNB] human gut metagenome; human gut
7328
7400
+
Gln
TTG
[ENA]
¢þ
>WENV182855537
OKNB01000175
[OKNB] human gut metagenome; human gut
7399
7472
+
fMet
CAT
[ENA]
¢þ
>WENV182855538
OKNB01000175
[OKNB] human gut metagenome; human gut
7487
7562
+
Asp
GTC
[ENA]
¢þ
>WENV182855539
OKNB01000175
[OKNB] human gut metagenome; human gut
7572
7646
+
Phe
GAA
[ENA]
¢þ
>WENV182855540
OKNB01000175
[OKNB] human gut metagenome; human gut
7659
7734
+
His
GTG
[ENA]
¢þ
>WENV182855536
OKNB01000165
[OKNB] human gut metagenome; human gut
7709
7621
-
Ser
GGA
[ENA]
¢þ
>WENV182855541
OKNB01000175
[OKNB] human gut metagenome; human gut
7752
7825
+
Gly
TCC
[ENA]
¢þ
>WENV182855542
OKNB01000175
[OKNB] human gut metagenome; human gut
7835
7909
+
Asn
GTT
[ENA]
¢þ
>WENV182855543
OKNB01000175
[OKNB] human gut metagenome; human gut
7910
7983
+
Glu
TTC
[ENA]
¢þ
>WENV182855547
OKNB01000225
[OKNB] human gut metagenome; human gut
7935
8008
+
Arg
ACG
[ENA]
¢þ
>WENV182855544
OKNB01000175
[OKNB] human gut metagenome; human gut
8034
8124
+
Ser
GGA
[ENA]
¢þ
>WENV182855522
OKNB01000085
[OKNB] human gut metagenome; human gut
8764
8840
+
Arg
TCT
[ENA]
¢þ
>WENV182855532
OKNB01000123
[OKNB] human gut metagenome; human gut
9888
9972
+
Ser
TGA
[ENA]
¢þ
>WENV182855531
OKNB01000119
[OKNB] human gut metagenome; human gut
10164
10091
-
Ala
GGC
[ENA]
¢þ
>WENV182855533
OKNB01000150
[OKNB] human gut metagenome; human gut
10504
10578
+
Pro
CGG
[ENA]
¢þ
>WENV182855524
OKNB01000091
[OKNB] human gut metagenome; human gut
10821
10913
+
Ser
TGA
[ENA]
¢þ
>WENV182855503
OKNB01000028
[OKNB] human gut metagenome; human gut
14186
14097
-
Ser
CGA
[ENA]
¢þ
>WENV182855526
OKNB01000098
[OKNB] human gut metagenome; human gut
14267
14193
-
Arg
CCG
[ENA]
¢þ
>WENV182855527
OKNB01000100
[OKNB] human gut metagenome; human gut
16523
16610
+
Leu
CAG
[ENA]
¢þ
>WENV182855521
OKNB01000083
[OKNB] human gut metagenome; human gut
18207
18122
-
Leu
CAA
[ENA]
¢þ
>WENV182855520
OKNB01000083
[OKNB] human gut metagenome; human gut
18290
18220
-
Cys
GCA
[ENA]
¢þ
>WENV182855519
OKNB01000083
[OKNB] human gut metagenome; human gut
18388
18315
-
Gln
TTG
[ENA]
¢þ
>WENV182855518
OKNB01000083
[OKNB] human gut metagenome; human gut
18474
18401
-
His
GTG
[ENA]
¢þ
>WENV182855517
OKNB01000083
[OKNB] human gut metagenome; human gut
18584
18511
-
Trp
CCA
[ENA]
¢þ
>WENV182855516
OKNB01000083
[OKNB] human gut metagenome; human gut
18670
18588
-
Tyr
GTA
[ENA]
¢þ
>WENV182855515
OKNB01000083
[OKNB] human gut metagenome; human gut
18747
18675
-
Phe
GAA
[ENA]
¢þ
>WENV182855514
OKNB01000083
[OKNB] human gut metagenome; human gut
18868
18793
-
Asp
GTC
[ENA]
¢þ
>WENV182855513
OKNB01000083
[OKNB] human gut metagenome; human gut
18952
18878
-
Val
TAC
[ENA]
¢þ
>WENV182855493
OKNB01000004
[OKNB] human gut metagenome; human gut
20605
20678
+
Arg
CCG
[ENA]
¢þ
>WENV182855504
OKNB01000029
[OKNB] human gut metagenome; human gut
21187
21113
-
Arg
TCT
[ENA]
¢þ
>WENV182855498
OKNB01000012
[OKNB] human gut metagenome; human gut
28030
27954
-
Arg
TCT
[ENA]
¢þ
>WENV182855512
OKNB01000048
[OKNB] human gut metagenome; human gut
28590
28515
-
Arg
TCT
[ENA]
¢þ
>WENV182855511
OKNB01000048
[OKNB] human gut metagenome; human gut
28668
28594
-
Asn
GTT
[ENA]
¢þ
>WENV182855510
OKNB01000047
[OKNB] human gut metagenome; human gut
29425
29350
-
Arg
TCT
[ENA]
¢þ
>WENV182855508
OKNB01000042
[OKNB] human gut metagenome; human gut
32287
32216
-
Arg
CCG
[ENA]
¢þ
>WENV182855506
OKNB01000031
[OKNB] human gut metagenome; human gut
32750
32824
+
Glu
TTC
[ENA]
¢þ
>WENV182855507
OKNB01000031
[OKNB] human gut metagenome; human gut
32830
32902
+
Asp
GTC
[ENA]
¢þ
>WENV182855499
OKNB01000021
[OKNB] human gut metagenome; human gut
35900
35973
+
Glu
TTC
[ENA]
¢þ
>WENV182855505
OKNB01000030
[OKNB] human gut metagenome; human gut
41415
41340
-
Thr
CGT
[ENA]
¢þ
>WENV182855502
OKNB01000028
[OKNB] human gut metagenome; human gut
45907
45832
-
Asn
GTT
[ENA]
¢þ
>WENV182855497
OKNB01000008
[OKNB] human gut metagenome; human gut
68714
68642
-
Thr
GGT
[ENA]
¢þ
>WENV182855495
OKNB01000006
[OKNB] human gut metagenome; human gut
70734
70659
-
Arg
TCT
[ENA]
¢þ
>WENV182855489
OKNB01000001
[OKNB] human gut metagenome; human gut
106824
106752
-
Thr
CGT
[ENA]
¢þ
>WENV182855494
OKNB01000006
[OKNB] human gut metagenome; human gut
120067
120142
+
Arg
CCT
[ENA]
¢þ
>WENV182855496
OKNB01000008
[OKNB] human gut metagenome; human gut
122452
122523
+
Trp
CCA
[ENA]
¢þ
>WENV182855492
OKNB01000002
[OKNB] human gut metagenome; human gut
238169
238096
-
Gln
TTG
[ENA]
¢þ
>WENV182855491
OKNB01000002
[OKNB] human gut metagenome; human gut
238259
238177
-
Tyr
GTA
[ENA]
¢þ
>WENV182855490
OKNB01000002
[OKNB] human gut metagenome; human gut
249592
249506
-
Leu
GAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK