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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKNJ] human gut metagenome; human gut
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182856258
OKNJ01000036
[OKNJ] human gut metagenome; human gut
4
74
+
Thr
GGT
[ENA]
¢þ
>WENV182856304
OKNJ01001466
[OKNJ] human gut metagenome; human gut
61
135
+
Glu
TTC
[ENA]
¢þ
>WENV182856295
OKNJ01001343
[OKNJ] human gut metagenome; human gut
78
149
+
Gly
GCC
[ENA]
¢þ
>WENV182856275
OKNJ01000197
[OKNJ] human gut metagenome; human gut
83
158
+
Trp
CCA
[ENA]
¢þ
>WENV182856278
OKNJ01000216
[OKNJ] human gut metagenome; human gut
99
174
+
Lys
CTT
[ENA]
¢þ
>WENV182856289
OKNJ01000860
[OKNJ] human gut metagenome; human gut
104
180
+
Arg
TCG
[ENA]
¢þ
>WENV182856264
OKNJ01000095
[OKNJ] human gut metagenome; human gut
132
57
-
Pro
TGG
[ENA]
¢þ
>WENV182856305
OKNJ01001466
[OKNJ] human gut metagenome; human gut
141
216
+
Val
TAC
[ENA]
¢þ
>WENV182856296
OKNJ01001343
[OKNJ] human gut metagenome; human gut
157
242
+
Leu
TAA
[ENA]
¢þ
>WENV182856309
OKNJ01002701
[OKNJ] human gut metagenome; human gut
164
74
-
Ser
GCT
[ENA]
¢þ
>WENV182856291
OKNJ01001147
[OKNJ] human gut metagenome; human gut
170
254
+
Leu
TAG
[ENA]
¢þ
>WENV182856276
OKNJ01000197
[OKNJ] human gut metagenome; human gut
187
262
+
Trp
CCA
[ENA]
¢þ
>WENV182856288
OKNJ01000778
[OKNJ] human gut metagenome; human gut
258
332
+
Glu
TTC
[ENA]
¢þ
>WENV182856297
OKNJ01001343
[OKNJ] human gut metagenome; human gut
262
335
+
Arg
ACG
[ENA]
¢þ
>WENV182856303
OKNJ01001452
[OKNJ] human gut metagenome; human gut
311
235
-
Met
CAT
[ENA]
¢þ
>WENV182856307
OKNJ01001647
[OKNJ] human gut metagenome; human gut
349
436
+
Ser
GGA
[ENA]
¢þ
>WENV182856298
OKNJ01001343
[OKNJ] human gut metagenome; human gut
354
429
+
Pro
TGG
[ENA]
¢þ
>WENV182856302
OKNJ01001452
[OKNJ] human gut metagenome; human gut
392
317
-
Thr
GGT
[ENA]
¢þ
>WENV182856301
OKNJ01001452
[OKNJ] human gut metagenome; human gut
499
424
-
fMet
CAT
[ENA]
¢þ
>WENV182856300
OKNJ01001452
[OKNJ] human gut metagenome; human gut
589
505
-
Tyr
GTA
[ENA]
¢þ
>WENV182856308
OKNJ01001905
[OKNJ] human gut metagenome; human gut
647
573
-
Asn
GTT
[ENA]
¢þ
>WENV182856299
OKNJ01001452
[OKNJ] human gut metagenome; human gut
675
600
-
Thr
TGT
[ENA]
¢þ
>WENV182856306
OKNJ01001575
[OKNJ] human gut metagenome; human gut
679
589
-
Ser
CGA
[ENA]
¢þ
>WENV182856294
OKNJ01001282
[OKNJ] human gut metagenome; human gut
734
658
-
Arg
TCT
[ENA]
¢þ
>WENV182856284
OKNJ01000384
[OKNJ] human gut metagenome; human gut
770
680
-
Ser
GCT
[ENA]
¢þ
>WENV182856283
OKNJ01000384
[OKNJ] human gut metagenome; human gut
866
776
-
Ser
TGA
[ENA]
¢þ
>WENV182856290
OKNJ01001005
[OKNJ] human gut metagenome; human gut
882
794
-
Ser
TGA
[ENA]
¢þ
>WENV182856293
OKNJ01001282
[OKNJ] human gut metagenome; human gut
914
841
-
Gly
TCC
[ENA]
¢þ
>WENV182856292
OKNJ01001282
[OKNJ] human gut metagenome; human gut
1001
925
-
Pro
TGG
[ENA]
¢þ
>WENV182856285
OKNJ01000479
[OKNJ] human gut metagenome; human gut
1202
1126
-
Arg
CCT
[ENA]
¢þ
>WENV182856266
OKNJ01000131
[OKNJ] human gut metagenome; human gut
1399
1473
+
Gly
GCC
[ENA]
¢þ
>WENV182856286
OKNJ01000639
[OKNJ] human gut metagenome; human gut
1417
1343
-
Ile2
CAT
[ENA]
¢þ
>WENV182856267
OKNJ01000131
[OKNJ] human gut metagenome; human gut
1481
1556
+
Asn
GTT
[ENA]
¢þ
>WENV182856268
OKNJ01000131
[OKNJ] human gut metagenome; human gut
1560
1635
+
Lys
TTT
[ENA]
¢þ
>WENV182856274
OKNJ01000193
[OKNJ] human gut metagenome; human gut
1566
1492
-
Cys
GCA
[ENA]
¢þ
>WENV182856273
OKNJ01000193
[OKNJ] human gut metagenome; human gut
1645
1572
-
Gly
TCC
[ENA]
¢þ
>WENV182856272
OKNJ01000193
[OKNJ] human gut metagenome; human gut
1723
1649
-
Gly
GCC
[ENA]
¢þ
>WENV182856282
OKNJ01000375
[OKNJ] human gut metagenome; human gut
1729
1803
+
Arg
CCT
[ENA]
¢þ
>WENV182856271
OKNJ01000193
[OKNJ] human gut metagenome; human gut
1804
1729
-
Phe
GAA
[ENA]
¢þ
>WENV182856287
OKNJ01000751
[OKNJ] human gut metagenome; human gut
2085
1995
-
Ser
GGA
[ENA]
¢þ
>WENV182856277
OKNJ01000213
[OKNJ] human gut metagenome; human gut
2559
2484
-
fMet
CAT
[ENA]
¢þ
>WENV182856281
OKNJ01000368
[OKNJ] human gut metagenome; human gut
4014
3939
-
Ala
TGC
[ENA]
¢þ
>WENV182856280
OKNJ01000368
[OKNJ] human gut metagenome; human gut
4096
4020
-
Ile2
CAT
[ENA]
¢þ
>WENV182856279
OKNJ01000258
[OKNJ] human gut metagenome; human gut
5356
5441
+
Leu
GAG
[ENA]
¢þ
>WENV182856265
OKNJ01000125
[OKNJ] human gut metagenome; human gut
6234
6308
+
Asn
GTT
[ENA]
¢þ
>WENV182856270
OKNJ01000190
[OKNJ] human gut metagenome; human gut
6892
6804
-
Leu
TAA
[ENA]
¢þ
>WENV182856269
OKNJ01000190
[OKNJ] human gut metagenome; human gut
6985
6909
-
Met
CAT
[ENA]
¢þ
>WENV182856262
OKNJ01000060
[OKNJ] human gut metagenome; human gut
7385
7296
-
Ser
GGA
[ENA]
¢þ
>WENV182856261
OKNJ01000049
[OKNJ] human gut metagenome; human gut
12703
12628
-
fMet
CAT
[ENA]
¢þ
>WENV182856263
OKNJ01000064
[OKNJ] human gut metagenome; human gut
14969
15045
+
Arg
ACG
[ENA]
¢þ
>WENV182856259
OKNJ01000037
[OKNJ] human gut metagenome; human gut
18696
18781
+
Leu
AAG
[ENA]
¢þ
>WENV182856260
OKNJ01000037
[OKNJ] human gut metagenome; human gut
19980
20052
+
Thr
CGT
[ENA]
¢þ
>WENV182856234
OKNJ01000010
[OKNJ] human gut metagenome; human gut
21133
21058
-
Arg
TCT
[ENA]
¢þ
>WENV182856232
OKNJ01000010
[OKNJ] human gut metagenome; human gut
21929
22002
+
Glu
TTC
[ENA]
¢þ
>WENV182856233
OKNJ01000010
[OKNJ] human gut metagenome; human gut
22032
22105
+
Asn
GTT
[ENA]
¢þ
>WENV182856257
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28074
27985
-
Ser
GCT
[ENA]
¢þ
>WENV182856256
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28158
28083
-
Ile
GAT
[ENA]
¢þ
>WENV182856255
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28258
28188
-
Gly
TCC
[ENA]
¢þ
>WENV182856254
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28350
28278
-
Phe
GAA
[ENA]
¢þ
>WENV182856253
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28429
28356
-
fMet
CAT
[ENA]
¢þ
>WENV182856252
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28532
28443
-
Ser
TGA
[ENA]
¢þ
>WENV182856251
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28630
28555
-
Ile2
CAT
[ENA]
¢þ
>WENV182856250
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28725
28650
-
Met
CAT
[ENA]
¢þ
>WENV182856249
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28804
28729
-
Pro
TGG
[ENA]
¢þ
>WENV182856248
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28883
28808
-
Arg
ACG
[ENA]
¢þ
>WENV182856219
OKNJ01000002
[OKNJ] human gut metagenome; human gut
28883
28971
+
Ser
CGA
[ENA]
¢þ
>WENV182856247
OKNJ01000028
[OKNJ] human gut metagenome; human gut
28985
28900
-
Leu
TAA
[ENA]
¢þ
>WENV182856246
OKNJ01000028
[OKNJ] human gut metagenome; human gut
29064
28993
-
Gly
GCC
[ENA]
¢þ
>WENV182856245
OKNJ01000028
[OKNJ] human gut metagenome; human gut
29152
29080
-
Thr
TGT
[ENA]
¢þ
>WENV182856244
OKNJ01000028
[OKNJ] human gut metagenome; human gut
29250
29167
-
Leu
TAG
[ENA]
¢þ
>WENV182856243
OKNJ01000028
[OKNJ] human gut metagenome; human gut
29331
29259
-
Lys
TTT
[ENA]
¢þ
>WENV182856241
OKNJ01000021
[OKNJ] human gut metagenome; human gut
29385
29469
+
Ser
GGA
[ENA]
¢þ
>WENV182856236
OKNJ01000013
[OKNJ] human gut metagenome; human gut
36207
36278
+
Arg
CCT
[ENA]
¢þ
>WENV182856239
OKNJ01000018
[OKNJ] human gut metagenome; human gut
39417
39346
-
Arg
CCG
[ENA]
¢þ
>WENV182856238
OKNJ01000018
[OKNJ] human gut metagenome; human gut
40885
40811
-
Gln
TTG
[ENA]
¢þ
>WENV182856237
OKNJ01000018
[OKNJ] human gut metagenome; human gut
40998
40918
-
Tyr
GTA
[ENA]
¢þ
>WENV182856235
OKNJ01000011
[OKNJ] human gut metagenome; human gut
41192
41119
-
Lys
CTT
[ENA]
¢þ
>WENV182856242
OKNJ01000022
[OKNJ] human gut metagenome; human gut
41674
41599
-
Thr
GGT
[ENA]
¢þ
>WENV182856240
OKNJ01000019
[OKNJ] human gut metagenome; human gut
47042
47112
+
Cys
GCA
[ENA]
¢þ
>WENV182856231
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90089
90004
-
Leu
CAA
[ENA]
¢þ
>WENV182856230
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90168
90095
-
Gln
TTG
[ENA]
¢þ
>WENV182856229
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90251
90177
-
His
GTG
[ENA]
¢þ
>WENV182856228
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90333
90261
-
Trp
CCA
[ENA]
¢þ
>WENV182856227
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90417
90337
-
Tyr
GTA
[ENA]
¢þ
>WENV182856226
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90507
90435
-
Phe
GAA
[ENA]
¢þ
>WENV182856225
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90586
90513
-
fMet
CAT
[ENA]
¢þ
>WENV182856224
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90689
90600
-
Ser
TGA
[ENA]
¢þ
>WENV182856223
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90771
90698
-
Glu
TTC
[ENA]
¢þ
>WENV182856222
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90855
90780
-
Ile
GAT
[ENA]
¢þ
>WENV182856221
OKNJ01000006
[OKNJ] human gut metagenome; human gut
90955
90885
-
Gly
TCC
[ENA]
¢þ
>WENV182856220
OKNJ01000006
[OKNJ] human gut metagenome; human gut
91044
90972
-
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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