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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OKNV] human gut metagenome; human gut
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182857250
OKNV01000317
[OKNV] human gut metagenome; human gut
1
77
+
fMet
CAT
[ENA]
¢þ
>WENV182857270
OKNV01000779
[OKNV] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182857212
OKNV01000029
[OKNV] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182857260
OKNV01000710
[OKNV] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¢þ
>WENV182857238
OKNV01000083
[OKNV] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182857218
OKNV01000038
[OKNV] human gut metagenome; human gut
79
4
-
Val
TAC
[ENA]
¢þ
>WENV182857219
OKNV01000039
[OKNV] human gut metagenome; human gut
89
175
+
Leu
CAG
[ENA]
¢þ
>WENV182857269
OKNV01000766
[OKNV] human gut metagenome; human gut
95
23
-
Thr
CGT
[ENA]
¢þ
>WENV182857239
OKNV01000083
[OKNV] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182857261
OKNV01000710
[OKNV] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¢þ
>WENV182857220
OKNV01000039
[OKNV] human gut metagenome; human gut
210
296
+
Leu
CAG
[ENA]
¢þ
>WENV182857240
OKNV01000083
[OKNV] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182857262
OKNV01000710
[OKNV] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¢þ
>WENV182857241
OKNV01000083
[OKNV] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¢þ
>WENV182857263
OKNV01000710
[OKNV] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¢þ
>WENV182857242
OKNV01000083
[OKNV] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¢þ
>WENV182857259
OKNV01000702
[OKNV] human gut metagenome; human gut
440
351
-
Ser
CGA
[ENA]
¢þ
>WENV182857264
OKNV01000710
[OKNV] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¢þ
>WENV182857243
OKNV01000083
[OKNV] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¢þ
>WENV182857265
OKNV01000710
[OKNV] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¢þ
>WENV182857244
OKNV01000083
[OKNV] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¢þ
>WENV182857266
OKNV01000710
[OKNV] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¢þ
>WENV182857268
OKNV01000714
[OKNV] human gut metagenome; human gut
692
763
+
Trp
CCA
[ENA]
¢þ
>WENV182857267
OKNV01000710
[OKNV] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¢þ
>WENV182857245
OKNV01000083
[OKNV] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¢þ
>WENV182857258
OKNV01000604
[OKNV] human gut metagenome; human gut
841
768
-
Glu
TTC
[ENA]
¢þ
>WENV182857251
OKNV01000352
[OKNV] human gut metagenome; human gut
912
840
-
Thr
GGT
[ENA]
¢þ
>WENV182857257
OKNV01000604
[OKNV] human gut metagenome; human gut
929
854
-
Ile
GAT
[ENA]
¢þ
>WENV182857256
OKNV01000604
[OKNV] human gut metagenome; human gut
1008
938
-
Gly
TCC
[ENA]
¢þ
>WENV182857255
OKNV01000604
[OKNV] human gut metagenome; human gut
1086
1010
-
Asp
GTC
[ENA]
¢þ
>WENV182857254
OKNV01000604
[OKNV] human gut metagenome; human gut
1209
1134
-
fMet
CAT
[ENA]
¢þ
>WENV182857196
OKNV01000004
[OKNV] human gut metagenome; human gut
1226
1150
-
Arg
TCT
[ENA]
¢þ
>WENV182857253
OKNV01000604
[OKNV] human gut metagenome; human gut
1331
1242
-
Ser
TGA
[ENA]
¢þ
>WENV182857252
OKNV01000456
[OKNV] human gut metagenome; human gut
1384
1459
+
Arg
TCT
[ENA]
¢þ
>WENV182857235
OKNV01000062
[OKNV] human gut metagenome; human gut
2017
1942
-
Thr
CGT
[ENA]
¢þ
>WENV182857217
OKNV01000038
[OKNV] human gut metagenome; human gut
2778
2853
+
Ala
GGC
[ENA]
¢þ
>WENV182857200
OKNV01000010
[OKNV] human gut metagenome; human gut
3922
3836
-
Leu
GAG
[ENA]
¢þ
>WENV182857225
OKNV01000051
[OKNV] human gut metagenome; human gut
4465
4376
-
Ser
CGA
[ENA]
¢þ
>WENV182857249
OKNV01000245
[OKNV] human gut metagenome; human gut
4922
4995
+
Arg
CCG
[ENA]
¢þ
>WENV182857224
OKNV01000051
[OKNV] human gut metagenome; human gut
5457
5532
+
Asn
GTT
[ENA]
¢þ
>WENV182857201
OKNV01000011
[OKNV] human gut metagenome; human gut
7022
7106
+
Tyr
GTA
[ENA]
¢þ
>WENV182857248
OKNV01000180
[OKNV] human gut metagenome; human gut
7494
7567
+
Lys
CTT
[ENA]
¢þ
>WENV182857247
OKNV01000123
[OKNV] human gut metagenome; human gut
8203
8279
+
Asp
GTC
[ENA]
¢þ
>WENV182857236
OKNV01000075
[OKNV] human gut metagenome; human gut
8679
8753
+
Arg
CCT
[ENA]
¢þ
>WENV182857237
OKNV01000079
[OKNV] human gut metagenome; human gut
14966
15041
+
Arg
CCT
[ENA]
¢þ
>WENV182857246
OKNV01000086
[OKNV] human gut metagenome; human gut
15137
15221
+
Leu
CAA
[ENA]
¢þ
>WENV182857211
OKNV01000028
[OKNV] human gut metagenome; human gut
17755
17831
+
Pro
CGG
[ENA]
¢þ
>WENV182857232
OKNV01000058
[OKNV] human gut metagenome; human gut
18926
19001
+
Gly
GCC
[ENA]
¢þ
>WENV182857233
OKNV01000058
[OKNV] human gut metagenome; human gut
19055
19128
+
Cys
GCA
[ENA]
¢þ
>WENV182857234
OKNV01000058
[OKNV] human gut metagenome; human gut
19141
19227
+
Leu
TAA
[ENA]
¢þ
>WENV182857231
OKNV01000054
[OKNV] human gut metagenome; human gut
21542
21467
-
Asn
GTT
[ENA]
¢þ
>WENV182857230
OKNV01000054
[OKNV] human gut metagenome; human gut
23291
23366
+
Asn
GTT
[ENA]
¢þ
>WENV182857229
OKNV01000053
[OKNV] human gut metagenome; human gut
31181
31106
-
Thr
GGT
[ENA]
¢þ
>WENV182857228
OKNV01000053
[OKNV] human gut metagenome; human gut
31262
31188
-
Gly
TCC
[ENA]
¢þ
>WENV182857227
OKNV01000053
[OKNV] human gut metagenome; human gut
31463
31379
-
Tyr
GTA
[ENA]
¢þ
>WENV182857226
OKNV01000053
[OKNV] human gut metagenome; human gut
31547
31472
-
Thr
TGT
[ENA]
¢þ
>WENV182857221
OKNV01000044
[OKNV] human gut metagenome; human gut
32165
32240
+
Ile2
CAT
[ENA]
¢þ
>WENV182857222
OKNV01000044
[OKNV] human gut metagenome; human gut
32248
32324
+
Arg
TCG
[ENA]
¢þ
>WENV182857223
OKNV01000044
[OKNV] human gut metagenome; human gut
32338
32414
+
Arg
TCT
[ENA]
¢þ
>WENV182857209
OKNV01000025
[OKNV] human gut metagenome; human gut
32426
32352
-
Gln
CTG
[ENA]
¢þ
>WENV182857208
OKNV01000025
[OKNV] human gut metagenome; human gut
32538
32464
-
Gln
CTG
[ENA]
¢þ
>WENV182857207
OKNV01000025
[OKNV] human gut metagenome; human gut
32663
32587
-
Met
CAT
[ENA]
¢þ
>WENV182857213
OKNV01000029
[OKNV] human gut metagenome; human gut
34607
34683
+
Arg
CCG
[ENA]
¢þ
>WENV182857214
OKNV01000029
[OKNV] human gut metagenome; human gut
34742
34817
+
His
GTG
[ENA]
¢þ
>WENV182857215
OKNV01000029
[OKNV] human gut metagenome; human gut
34838
34924
+
Leu
CAG
[ENA]
¢þ
>WENV182857216
OKNV01000029
[OKNV] human gut metagenome; human gut
34967
35043
+
Pro
TGG
[ENA]
¢þ
>WENV182857206
OKNV01000022
[OKNV] human gut metagenome; human gut
39152
39246
+
SeC
TCA
[ENA]
¢þ
>WENV182857199
OKNV01000008
[OKNV] human gut metagenome; human gut
56610
56537
-
Gly
CCC
[ENA]
¢þ
>WENV182857210
OKNV01000027
[OKNV] human gut metagenome; human gut
59365
59440
+
Phe
GAA
[ENA]
¢þ
>WENV182857205
OKNV01000019
[OKNV] human gut metagenome; human gut
61603
61527
-
Pro
GGG
[ENA]
¢þ
>WENV182857195
OKNV01000003
[OKNV] human gut metagenome; human gut
69598
69523
-
Phe
GAA
[ENA]
¢þ
>WENV182857202
OKNV01000018
[OKNV] human gut metagenome; human gut
76241
76333
+
Ser
GCT
[ENA]
¢þ
>WENV182857203
OKNV01000018
[OKNV] human gut metagenome; human gut
76337
76413
+
Arg
ACG
[ENA]
¢þ
>WENV182857204
OKNV01000018
[OKNV] human gut metagenome; human gut
76476
76552
+
Arg
ACG
[ENA]
¢þ
>WENV182857197
OKNV01000005
[OKNV] human gut metagenome; human gut
91367
91292
-
Ile2
CAT
[ENA]
¢þ
>WENV182857192
OKNV01000003
[OKNV] human gut metagenome; human gut
98464
98539
+
Gly
GCC
[ENA]
¢þ
>WENV182857193
OKNV01000003
[OKNV] human gut metagenome; human gut
98575
98650
+
Gly
GCC
[ENA]
¢þ
>WENV182857194
OKNV01000003
[OKNV] human gut metagenome; human gut
98686
98761
+
Gly
GCC
[ENA]
¢þ
>WENV182857198
OKNV01000006
[OKNV] human gut metagenome; human gut
108622
108709
+
Ser
GGA
[ENA]
¢þ
>WENV182857191
OKNV01000002
[OKNV] human gut metagenome; human gut
142757
142670
-
Ser
GGA
[ENA]
¢þ
>WENV182857190
OKNV01000002
[OKNV] human gut metagenome; human gut
238145
238058
-
Ser
TGA
[ENA]
¢þ
>WENV182857189
OKNV01000001
[OKNV] human gut metagenome; human gut
267675
267599
-
Val
GAC
[ENA]
¢þ
>WENV182857188
OKNV01000001
[OKNV] human gut metagenome; human gut
267756
267680
-
Val
GAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK