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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKPA] human gut metagenome; human gut
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182861063
OKPA01000486
[OKPA] human gut metagenome; human gut
92
176
+
Leu
GAG
[ENA]
¢þ
>WENV182861030
OKPA01000135
[OKPA] human gut metagenome; human gut
104
179
+
Lys
TTT
[ENA]
¢þ
>WENV182861051
OKPA01000287
[OKPA] human gut metagenome; human gut
166
91
-
Lys
TTT
[ENA]
¢þ
>WENV182861025
OKPA01000108
[OKPA] human gut metagenome; human gut
177
102
-
Val
TAC
[ENA]
¢þ
>WENV182861066
OKPA01000525
[OKPA] human gut metagenome; human gut
192
117
-
Ala
TGC
[ENA]
¢þ
>WENV182861064
OKPA01000486
[OKPA] human gut metagenome; human gut
198
271
+
Gly
GCC
[ENA]
¢þ
>WENV182861031
OKPA01000135
[OKPA] human gut metagenome; human gut
213
288
+
Lys
TTT
[ENA]
¢þ
>WENV182861067
OKPA01000543
[OKPA] human gut metagenome; human gut
218
291
+
Thr
CGT
[ENA]
¢þ
>WENV182861045
OKPA01000222
[OKPA] human gut metagenome; human gut
276
192
-
Leu
CAA
[ENA]
¢þ
>WENV182861068
OKPA01000729
[OKPA] human gut metagenome; human gut
291
209
-
Leu
TAG
[ENA]
¢þ
>WENV182861065
OKPA01000525
[OKPA] human gut metagenome; human gut
311
235
-
Ile
GAT
[ENA]
¢þ
>WENV182860981
OKPA01000018
[OKPA] human gut metagenome; human gut
313
237
-
fMet
CAT
[ENA]
¢þ
>WENV182861060
OKPA01000426
[OKPA] human gut metagenome; human gut
344
269
-
Thr
GGT
[ENA]
¢þ
>WENV182861047
OKPA01000256
[OKPA] human gut metagenome; human gut
375
448
+
Phe
GAA
[ENA]
¢þ
>WENV182861059
OKPA01000426
[OKPA] human gut metagenome; human gut
425
351
-
Gly
TCC
[ENA]
¢þ
>WENV182861048
OKPA01000256
[OKPA] human gut metagenome; human gut
460
533
+
Pro
CGG
[ENA]
¢þ
>WENV182861058
OKPA01000426
[OKPA] human gut metagenome; human gut
626
542
-
Tyr
GTA
[ENA]
¢þ
>WENV182861034
OKPA01000148
[OKPA] human gut metagenome; human gut
707
631
-
Arg
TCT
[ENA]
¢þ
>WENV182861057
OKPA01000426
[OKPA] human gut metagenome; human gut
710
635
-
Thr
TGT
[ENA]
¢þ
>WENV182861036
OKPA01000186
[OKPA] human gut metagenome; human gut
806
732
-
Arg
TCT
[ENA]
¢þ
>WENV182861062
OKPA01000444
[OKPA] human gut metagenome; human gut
1171
1097
-
Ala
TGC
[ENA]
¢þ
>WENV182861061
OKPA01000444
[OKPA] human gut metagenome; human gut
1276
1200
-
Ile
GAT
[ENA]
¢þ
>WENV182861055
OKPA01000338
[OKPA] human gut metagenome; human gut
1663
1576
-
Ser
GGA
[ENA]
¢þ
>WENV182860966
OKPA01000002
[OKPA] human gut metagenome; human gut
2869
2793
-
Arg
TCT
[ENA]
¢þ
>WENV182861023
OKPA01000108
[OKPA] human gut metagenome; human gut
2876
2951
+
Ala
GGC
[ENA]
¢þ
>WENV182861024
OKPA01000108
[OKPA] human gut metagenome; human gut
2991
3066
+
Ala
GGC
[ENA]
¢þ
>WENV182861010
OKPA01000072
[OKPA] human gut metagenome; human gut
3408
3482
+
Ala
GGC
[ENA]
¢þ
>WENV182861009
OKPA01000060
[OKPA] human gut metagenome; human gut
3503
3427
-
Pro
TGG
[ENA]
¢þ
>WENV182861008
OKPA01000060
[OKPA] human gut metagenome; human gut
3632
3546
-
Leu
CAG
[ENA]
¢þ
>WENV182861007
OKPA01000060
[OKPA] human gut metagenome; human gut
3728
3653
-
His
GTG
[ENA]
¢þ
>WENV182861032
OKPA01000141
[OKPA] human gut metagenome; human gut
3729
3657
-
Glu
TTC
[ENA]
¢þ
>WENV182861006
OKPA01000060
[OKPA] human gut metagenome; human gut
3863
3787
-
Arg
CCG
[ENA]
¢þ
>WENV182861056
OKPA01000343
[OKPA] human gut metagenome; human gut
3904
3977
+
Lys
CTT
[ENA]
¢þ
>WENV182860972
OKPA01000010
[OKPA] human gut metagenome; human gut
4493
4568
+
Gly
GCC
[ENA]
¢þ
>WENV182860973
OKPA01000010
[OKPA] human gut metagenome; human gut
4622
4695
+
Cys
GCA
[ENA]
¢þ
>WENV182860974
OKPA01000010
[OKPA] human gut metagenome; human gut
4708
4794
+
Leu
TAA
[ENA]
¢þ
>WENV182860979
OKPA01000013
[OKPA] human gut metagenome; human gut
4760
4676
-
Leu
CAA
[ENA]
¢þ
>WENV182861049
OKPA01000268
[OKPA] human gut metagenome; human gut
5491
5565
+
Thr
TGT
[ENA]
¢þ
>WENV182861053
OKPA01000294
[OKPA] human gut metagenome; human gut
6581
6654
+
Phe
GAA
[ENA]
¢þ
>WENV182860998
OKPA01000054
[OKPA] human gut metagenome; human gut
6818
6894
+
Met
CAT
[ENA]
¢þ
>WENV182860999
OKPA01000054
[OKPA] human gut metagenome; human gut
6903
6987
+
Leu
TAG
[ENA]
¢þ
>WENV182861000
OKPA01000054
[OKPA] human gut metagenome; human gut
7011
7085
+
Gln
TTG
[ENA]
¢þ
>WENV182861040
OKPA01000198
[OKPA] human gut metagenome; human gut
7106
7032
-
Arg
CCT
[ENA]
¢þ
>WENV182861001
OKPA01000054
[OKPA] human gut metagenome; human gut
7120
7194
+
Gln
TTG
[ENA]
¢þ
>WENV182861002
OKPA01000054
[OKPA] human gut metagenome; human gut
7210
7286
+
Met
CAT
[ENA]
¢þ
>WENV182861003
OKPA01000054
[OKPA] human gut metagenome; human gut
7335
7409
+
Gln
CTG
[ENA]
¢þ
>WENV182861052
OKPA01000288
[OKPA] human gut metagenome; human gut
7776
7848
+
Arg
CCT
[ENA]
¢þ
>WENV182861016
OKPA01000086
[OKPA] human gut metagenome; human gut
8046
7971
-
Thr
CGT
[ENA]
¢þ
>WENV182861054
OKPA01000299
[OKPA] human gut metagenome; human gut
8191
8267
+
Asp
GTC
[ENA]
¢þ
>WENV182860994
OKPA01000041
[OKPA] human gut metagenome; human gut
8203
8127
-
Val
GAC
[ENA]
¢þ
>WENV182860993
OKPA01000041
[OKPA] human gut metagenome; human gut
8284
8208
-
Val
GAC
[ENA]
¢þ
>WENV182861039
OKPA01000195
[OKPA] human gut metagenome; human gut
8383
8307
-
Pro
CGG
[ENA]
¢þ
>WENV182861042
OKPA01000214
[OKPA] human gut metagenome; human gut
8628
8702
+
Asn
GTT
[ENA]
¢þ
>WENV182861043
OKPA01000214
[OKPA] human gut metagenome; human gut
8731
8805
+
Asn
GTT
[ENA]
¢þ
>WENV182860975
OKPA01000011
[OKPA] human gut metagenome; human gut
8847
8774
-
Lys
TTT
[ENA]
¢þ
>WENV182860992
OKPA01000038
[OKPA] human gut metagenome; human gut
8934
9009
+
Pro
GGG
[ENA]
¢þ
>WENV182861050
OKPA01000279
[OKPA] human gut metagenome; human gut
9868
9793
-
Thr
GGT
[ENA]
¢þ
>WENV182861044
OKPA01000216
[OKPA] human gut metagenome; human gut
11841
11914
+
fMet
CAT
[ENA]
¢þ
>WENV182861026
OKPA01000109
[OKPA] human gut metagenome; human gut
12727
12801
+
Asn
GTT
[ENA]
¢þ
>WENV182861027
OKPA01000109
[OKPA] human gut metagenome; human gut
12807
12882
+
Thr
TGT
[ENA]
¢þ
>WENV182861035
OKPA01000160
[OKPA] human gut metagenome; human gut
13024
13107
+
Tyr
GTA
[ENA]
¢þ
>WENV182861046
OKPA01000223
[OKPA] human gut metagenome; human gut
13073
12998
-
Pro
TGG
[ENA]
¢þ
>WENV182861020
OKPA01000098
[OKPA] human gut metagenome; human gut
13755
13830
+
Val
TAC
[ENA]
¢þ
>WENV182861021
OKPA01000098
[OKPA] human gut metagenome; human gut
13859
13934
+
Val
TAC
[ENA]
¢þ
>WENV182861033
OKPA01000143
[OKPA] human gut metagenome; human gut
14030
13956
-
Asp
GTC
[ENA]
¢þ
>WENV182861029
OKPA01000134
[OKPA] human gut metagenome; human gut
14169
14096
-
Gly
CCC
[ENA]
¢þ
>WENV182861041
OKPA01000201
[OKPA] human gut metagenome; human gut
14267
14339
+
Cys
GCA
[ENA]
¢þ
>WENV182861037
OKPA01000192
[OKPA] human gut metagenome; human gut
15368
15441
+
Gly
GCC
[ENA]
¢þ
>WENV182861038
OKPA01000192
[OKPA] human gut metagenome; human gut
15455
15539
+
Leu
TAA
[ENA]
¢þ
>WENV182861017
OKPA01000087
[OKPA] human gut metagenome; human gut
17142
17229
+
Ser
GCT
[ENA]
¢þ
>WENV182861018
OKPA01000087
[OKPA] human gut metagenome; human gut
17307
17379
+
Glu
CTC
[ENA]
¢þ
>WENV182861028
OKPA01000116
[OKPA] human gut metagenome; human gut
17529
17603
+
Ile2
CAT
[ENA]
¢þ
>WENV182861019
OKPA01000094
[OKPA] human gut metagenome; human gut
17653
17724
+
Gln
TTG
[ENA]
¢þ
>WENV182861015
OKPA01000083
[OKPA] human gut metagenome; human gut
17868
17795
-
Trp
CCA
[ENA]
¢þ
>WENV182861011
OKPA01000074
[OKPA] human gut metagenome; human gut
18154
18228
+
Thr
TGT
[ENA]
¢þ
>WENV182861012
OKPA01000074
[OKPA] human gut metagenome; human gut
18302
18385
+
Tyr
GTA
[ENA]
¢þ
>WENV182861013
OKPA01000074
[OKPA] human gut metagenome; human gut
18499
18571
+
Thr
GGT
[ENA]
¢þ
>WENV182861014
OKPA01000074
[OKPA] human gut metagenome; human gut
19859
19932
+
Trp
CCA
[ENA]
¢þ
>WENV182861022
OKPA01000104
[OKPA] human gut metagenome; human gut
26291
26367
+
Met
CAT
[ENA]
¢þ
>WENV182860995
OKPA01000044
[OKPA] human gut metagenome; human gut
29995
30070
+
Ile2
CAT
[ENA]
¢þ
>WENV182860988
OKPA01000026
[OKPA] human gut metagenome; human gut
30857
30782
-
Asn
GTT
[ENA]
¢þ
>WENV182860983
OKPA01000023
[OKPA] human gut metagenome; human gut
31788
31863
+
Phe
GAA
[ENA]
¢þ
>WENV182860987
OKPA01000026
[OKPA] human gut metagenome; human gut
31849
31938
+
Ser
CGA
[ENA]
¢þ
>WENV182860996
OKPA01000047
[OKPA] human gut metagenome; human gut
32684
32759
+
Phe
GAA
[ENA]
¢þ
>WENV182860997
OKPA01000052
[OKPA] human gut metagenome; human gut
38089
38183
+
SeC
TCA
[ENA]
¢þ
>WENV182861005
OKPA01000060
[OKPA] human gut metagenome; human gut
38407
38332
-
Trp
CCA
[ENA]
¢þ
>WENV182861004
OKPA01000060
[OKPA] human gut metagenome; human gut
38492
38416
-
Asp
GTC
[ENA]
¢þ
>WENV182860989
OKPA01000033
[OKPA] human gut metagenome; human gut
47338
47424
+
Leu
CAG
[ENA]
¢þ
>WENV182860990
OKPA01000033
[OKPA] human gut metagenome; human gut
47453
47539
+
Leu
CAG
[ENA]
¢þ
>WENV182860976
OKPA01000012
[OKPA] human gut metagenome; human gut
47529
47621
+
Ser
GCT
[ENA]
¢þ
>WENV182860991
OKPA01000033
[OKPA] human gut metagenome; human gut
47574
47660
+
Leu
CAG
[ENA]
¢þ
>WENV182860977
OKPA01000012
[OKPA] human gut metagenome; human gut
47625
47701
+
Arg
ACG
[ENA]
¢þ
>WENV182860978
OKPA01000012
[OKPA] human gut metagenome; human gut
47765
47841
+
Arg
ACG
[ENA]
¢þ
>WENV182860982
OKPA01000020
[OKPA] human gut metagenome; human gut
50372
50459
+
Ser
TGA
[ENA]
¢þ
>WENV182860986
OKPA01000024
[OKPA] human gut metagenome; human gut
52039
51964
-
Asn
GTT
[ENA]
¢þ
>WENV182860980
OKPA01000017
[OKPA] human gut metagenome; human gut
53502
53428
-
His
GTG
[ENA]
¢þ
>WENV182860967
OKPA01000003
[OKPA] human gut metagenome; human gut
54293
54217
-
Pro
GGG
[ENA]
¢þ
>WENV182860985
OKPA01000024
[OKPA] human gut metagenome; human gut
54448
54373
-
Asn
GTT
[ENA]
¢þ
>WENV182860984
OKPA01000024
[OKPA] human gut metagenome; human gut
56197
56272
+
Asn
GTT
[ENA]
¢þ
>WENV182860968
OKPA01000004
[OKPA] human gut metagenome; human gut
75708
75795
+
Ser
GGA
[ENA]
¢þ
>WENV182860971
OKPA01000006
[OKPA] human gut metagenome; human gut
77143
77216
+
Gly
CCC
[ENA]
¢þ
>WENV182860969
OKPA01000005
[OKPA] human gut metagenome; human gut
89590
89676
+
Leu
GAG
[ENA]
¢þ
>WENV182860970
OKPA01000005
[OKPA] human gut metagenome; human gut
93457
93533
+
fMet
CAT
[ENA]
¢þ
>WENV182860964
OKPA01000001
[OKPA] human gut metagenome; human gut
101443
101527
+
Tyr
GTA
[ENA]
¢þ
>WENV182860965
OKPA01000001
[OKPA] human gut metagenome; human gut
101561
101645
+
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK