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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKQD] human gut metagenome; human gut
HIT:
157 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182864537
OKQD01000298
[OKQD] human gut metagenome; human gut
1
90
+
Ser
TGA
[ENA]
¢þ
>WENV182864565
OKQD01001374
[OKQD] human gut metagenome; human gut
83
156
+
Ala
TGC
[ENA]
¢þ
>WENV182864448
OKQD01000013
[OKQD] human gut metagenome; human gut
106
181
+
Trp
CCA
[ENA]
¢þ
>WENV182864538
OKQD01000298
[OKQD] human gut metagenome; human gut
123
198
+
fMet
CAT
[ENA]
¢þ
>WENV182864578
OKQD01002112
[OKQD] human gut metagenome; human gut
167
81
-
Leu
GAG
[ENA]
¢þ
>WENV182864566
OKQD01001380
[OKQD] human gut metagenome; human gut
178
104
-
Pro
GGG
[ENA]
¢þ
>WENV182864571
OKQD01001494
[OKQD] human gut metagenome; human gut
180
108
-
Gln
CTG
[ENA]
¢þ
>WENV182864459
OKQD01000029
[OKQD] human gut metagenome; human gut
183
107
-
Arg
ACG
[ENA]
¢þ
>WENV182864581
OKQD01002181
[OKQD] human gut metagenome; human gut
194
269
+
Glu
TTC
[ENA]
¢þ
>WENV182864569
OKQD01001441
[OKQD] human gut metagenome; human gut
202
127
-
Arg
TCT
[ENA]
¢þ
>WENV182864549
OKQD01000404
[OKQD] human gut metagenome; human gut
212
138
-
Ile2
CAT
[ENA]
¢þ
>WENV182864539
OKQD01000298
[OKQD] human gut metagenome; human gut
245
320
+
Asp
GTC
[ENA]
¢þ
>WENV182864580
OKQD01002155
[OKQD] human gut metagenome; human gut
295
219
-
Pro
CGG
[ENA]
¢þ
>WENV182864550
OKQD01000443
[OKQD] human gut metagenome; human gut
309
233
-
Arg
CCT
[ENA]
¢þ
>WENV182864584
OKQD01002216
[OKQD] human gut metagenome; human gut
312
236
-
Met
CAT
[ENA]
¢þ
>WENV182864458
OKQD01000029
[OKQD] human gut metagenome; human gut
324
248
-
Arg
ACG
[ENA]
¢þ
>WENV182864540
OKQD01000298
[OKQD] human gut metagenome; human gut
324
401
+
Phe
GAA
[ENA]
¢þ
>WENV182864564
OKQD01001345
[OKQD] human gut metagenome; human gut
333
250
-
Leu
TAG
[ENA]
¢þ
>WENV182864579
OKQD01002140
[OKQD] human gut metagenome; human gut
349
278
-
Gly
CCC
[ENA]
¢þ
>WENV182864587
OKQD01002355
[OKQD] human gut metagenome; human gut
372
462
+
Ser
GCT
[ENA]
¢þ
>WENV182864583
OKQD01002216
[OKQD] human gut metagenome; human gut
393
318
-
Thr
GGT
[ENA]
¢þ
>WENV182864577
OKQD01002060
[OKQD] human gut metagenome; human gut
401
316
-
Ser
TGA
[ENA]
¢þ
>WENV182864541
OKQD01000298
[OKQD] human gut metagenome; human gut
412
482
+
Gly
TCC
[ENA]
¢þ
>WENV182864457
OKQD01000029
[OKQD] human gut metagenome; human gut
421
329
-
Ser
GCT
[ENA]
¢þ
>WENV182864586
OKQD01002291
[OKQD] human gut metagenome; human gut
441
362
-
Gln
TTG
[ENA]
¢þ
>WENV182864585
OKQD01002259
[OKQD] human gut metagenome; human gut
449
523
+
Ile2
CAT
[ENA]
¢þ
>WENV182864576
OKQD01001959
[OKQD] human gut metagenome; human gut
479
406
-
Trp
CCA
[ENA]
¢þ
>WENV182864568
OKQD01001440
[OKQD] human gut metagenome; human gut
488
563
+
Thr
TGT
[ENA]
¢þ
>WENV182864507
OKQD01000194
[OKQD] human gut metagenome; human gut
493
421
-
Thr
GGT
[ENA]
¢þ
>WENV182864529
OKQD01000241
[OKQD] human gut metagenome; human gut
495
420
-
Ala
TGC
[ENA]
¢þ
>WENV182864542
OKQD01000298
[OKQD] human gut metagenome; human gut
496
569
+
Ile
GAT
[ENA]
¢þ
>WENV182864582
OKQD01002216
[OKQD] human gut metagenome; human gut
500
425
-
fMet
CAT
[ENA]
¢þ
>WENV182864573
OKQD01001773
[OKQD] human gut metagenome; human gut
518
593
+
Thr
CGT
[ENA]
¢þ
>WENV182864560
OKQD01000910
[OKQD] human gut metagenome; human gut
560
472
-
Ser
TGA
[ENA]
¢þ
>WENV182864543
OKQD01000298
[OKQD] human gut metagenome; human gut
579
668
+
Ser
GCT
[ENA]
¢þ
>WENV182864528
OKQD01000241
[OKQD] human gut metagenome; human gut
582
506
-
Ile
GAT
[ENA]
¢þ
>WENV182864567
OKQD01001404
[OKQD] human gut metagenome; human gut
583
656
+
Glu
TTC
[ENA]
¢þ
>WENV182864575
OKQD01001880
[OKQD] human gut metagenome; human gut
625
551
-
Val
GAC
[ENA]
¢þ
>WENV182864544
OKQD01000298
[OKQD] human gut metagenome; human gut
682
755
+
Glu
TTC
[ENA]
¢þ
>WENV182864572
OKQD01001647
[OKQD] human gut metagenome; human gut
687
759
+
Asn
GTT
[ENA]
¢þ
>WENV182864574
OKQD01001880
[OKQD] human gut metagenome; human gut
697
626
-
Cys
GCA
[ENA]
¢þ
>WENV182864570
OKQD01001467
[OKQD] human gut metagenome; human gut
865
940
+
Ala
GGC
[ENA]
¢þ
>WENV182864472
OKQD01000061
[OKQD] human gut metagenome; human gut
885
801
-
Leu
CAA
[ENA]
¢þ
>WENV182864561
OKQD01000931
[OKQD] human gut metagenome; human gut
1023
1104
+
Tyr
GTA
[ENA]
¢þ
>WENV182864562
OKQD01000931
[OKQD] human gut metagenome; human gut
1309
1382
+
Thr
GGT
[ENA]
¢þ
>WENV182864563
OKQD01000931
[OKQD] human gut metagenome; human gut
1445
1519
+
Met
CAT
[ENA]
¢þ
>WENV182864556
OKQD01000577
[OKQD] human gut metagenome; human gut
1489
1414
-
Arg
TCT
[ENA]
¢þ
>WENV182864558
OKQD01000624
[OKQD] human gut metagenome; human gut
1621
1697
+
fMet
CAT
[ENA]
¢þ
>WENV182864552
OKQD01000542
[OKQD] human gut metagenome; human gut
1707
1783
+
Pro
TGG
[ENA]
¢þ
>WENV182864551
OKQD01000531
[OKQD] human gut metagenome; human gut
1724
1648
-
Pro
GGG
[ENA]
¢þ
>WENV182864553
OKQD01000542
[OKQD] human gut metagenome; human gut
1794
1867
+
Gly
TCC
[ENA]
¢þ
>WENV182864468
OKQD01000049
[OKQD] human gut metagenome; human gut
1804
1729
-
Thr
CGT
[ENA]
¢þ
>WENV182864559
OKQD01000744
[OKQD] human gut metagenome; human gut
1882
1957
+
Lys
CTT
[ENA]
¢þ
>WENV182864545
OKQD01000300
[OKQD] human gut metagenome; human gut
1887
1804
-
Leu
CAG
[ENA]
¢þ
>WENV182864554
OKQD01000542
[OKQD] human gut metagenome; human gut
1973
2049
+
Arg
TCT
[ENA]
¢þ
>WENV182864548
OKQD01000389
[OKQD] human gut metagenome; human gut
1991
1905
-
Leu
GAG
[ENA]
¢þ
>WENV182864557
OKQD01000615
[OKQD] human gut metagenome; human gut
2485
2411
-
Leu
TAA
[ENA]
¢þ
>WENV182864555
OKQD01000548
[OKQD] human gut metagenome; human gut
2644
2728
+
Leu
CAA
[ENA]
¢þ
>WENV182864527
OKQD01000241
[OKQD] human gut metagenome; human gut
2676
2601
-
Lys
TTT
[ENA]
¢þ
>WENV182864526
OKQD01000241
[OKQD] human gut metagenome; human gut
2755
2681
-
Gln
TTG
[ENA]
¢þ
>WENV182864470
OKQD01000058
[OKQD] human gut metagenome; human gut
2814
2725
-
Ser
CGA
[ENA]
¢þ
>WENV182864525
OKQD01000241
[OKQD] human gut metagenome; human gut
2855
2780
-
His
GTG
[ENA]
¢þ
>WENV182864546
OKQD01000365
[OKQD] human gut metagenome; human gut
3147
3074
-
Arg
CCG
[ENA]
¢þ
>WENV182864474
OKQD01000064
[OKQD] human gut metagenome; human gut
3633
3558
-
Asn
GTT
[ENA]
¢þ
>WENV182864531
OKQD01000256
[OKQD] human gut metagenome; human gut
4406
4496
+
Ser
CGA
[ENA]
¢þ
>WENV182864547
OKQD01000371
[OKQD] human gut metagenome; human gut
4931
5004
+
Arg
CCG
[ENA]
¢þ
>WENV182864536
OKQD01000286
[OKQD] human gut metagenome; human gut
5488
5413
-
Ala
GGC
[ENA]
¢þ
>WENV182864535
OKQD01000286
[OKQD] human gut metagenome; human gut
5605
5530
-
Ala
GGC
[ENA]
¢þ
>WENV182864505
OKQD01000164
[OKQD] human gut metagenome; human gut
6450
6377
-
Gln
TTG
[ENA]
¢þ
>WENV182864504
OKQD01000164
[OKQD] human gut metagenome; human gut
6540
6458
-
Tyr
GTA
[ENA]
¢þ
>WENV182864534
OKQD01000284
[OKQD] human gut metagenome; human gut
6610
6700
+
Ser
GGA
[ENA]
¢þ
>WENV182864515
OKQD01000214
[OKQD] human gut metagenome; human gut
7625
7700
+
Ile2
CAT
[ENA]
¢þ
>WENV182864516
OKQD01000236
[OKQD] human gut metagenome; human gut
7747
7821
+
Gly
GCC
[ENA]
¢þ
>WENV182864517
OKQD01000236
[OKQD] human gut metagenome; human gut
7829
7904
+
Asn
GTT
[ENA]
¢þ
>WENV182864518
OKQD01000236
[OKQD] human gut metagenome; human gut
7908
7983
+
Lys
TTT
[ENA]
¢þ
>WENV182864519
OKQD01000236
[OKQD] human gut metagenome; human gut
7989
8063
+
Glu
TTC
[ENA]
¢þ
>WENV182864533
OKQD01000282
[OKQD] human gut metagenome; human gut
7995
7919
-
Arg
ACG
[ENA]
¢þ
>WENV182864520
OKQD01000236
[OKQD] human gut metagenome; human gut
8069
8144
+
Val
TAC
[ENA]
¢þ
>WENV182864521
OKQD01000236
[OKQD] human gut metagenome; human gut
8148
8222
+
Gly
GCC
[ENA]
¢þ
>WENV182864532
OKQD01000282
[OKQD] human gut metagenome; human gut
8183
8108
-
Trp
CCA
[ENA]
¢þ
>WENV182864522
OKQD01000236
[OKQD] human gut metagenome; human gut
8230
8305
+
Asn
GTT
[ENA]
¢þ
>WENV182864523
OKQD01000236
[OKQD] human gut metagenome; human gut
8314
8388
+
Glu
TTC
[ENA]
¢þ
>WENV182864524
OKQD01000236
[OKQD] human gut metagenome; human gut
8394
8469
+
Val
TAC
[ENA]
¢þ
>WENV182864530
OKQD01000251
[OKQD] human gut metagenome; human gut
9610
9684
+
Arg
CCG
[ENA]
¢þ
>WENV182864488
OKQD01000106
[OKQD] human gut metagenome; human gut
10253
10178
-
Asn
GTT
[ENA]
¢þ
>WENV182864487
OKQD01000106
[OKQD] human gut metagenome; human gut
12002
12077
+
Asn
GTT
[ENA]
¢þ
>WENV182864514
OKQD01000200
[OKQD] human gut metagenome; human gut
12216
12143
-
Pro
TGG
[ENA]
¢þ
>WENV182864513
OKQD01000200
[OKQD] human gut metagenome; human gut
12379
12306
-
Arg
ACG
[ENA]
¢þ
>WENV182864512
OKQD01000200
[OKQD] human gut metagenome; human gut
12479
12394
-
Leu
TAA
[ENA]
¢þ
>WENV182864511
OKQD01000200
[OKQD] human gut metagenome; human gut
12566
12495
-
Gly
GCC
[ENA]
¢þ
>WENV182864510
OKQD01000200
[OKQD] human gut metagenome; human gut
12646
12571
-
Thr
TGT
[ENA]
¢þ
>WENV182864509
OKQD01000200
[OKQD] human gut metagenome; human gut
12735
12652
-
Leu
TAG
[ENA]
¢þ
>WENV182864508
OKQD01000200
[OKQD] human gut metagenome; human gut
12824
12750
-
Lys
TTT
[ENA]
¢þ
>WENV182864489
OKQD01000115
[OKQD] human gut metagenome; human gut
12865
12941
+
Pro
TGG
[ENA]
¢þ
>WENV182864506
OKQD01000183
[OKQD] human gut metagenome; human gut
13524
13440
-
Leu
TAG
[ENA]
¢þ
>WENV182864473
OKQD01000064
[OKQD] human gut metagenome; human gut
14577
14502
-
Asn
GTT
[ENA]
¢þ
>WENV182864503
OKQD01000147
[OKQD] human gut metagenome; human gut
16192
16107
-
Leu
CAA
[ENA]
¢þ
>WENV182864502
OKQD01000147
[OKQD] human gut metagenome; human gut
16275
16205
-
Cys
GCA
[ENA]
¢þ
>WENV182864501
OKQD01000147
[OKQD] human gut metagenome; human gut
16373
16300
-
Gln
TTG
[ENA]
¢þ
>WENV182864500
OKQD01000147
[OKQD] human gut metagenome; human gut
16459
16386
-
His
GTG
[ENA]
¢þ
>WENV182864499
OKQD01000147
[OKQD] human gut metagenome; human gut
16569
16496
-
Trp
CCA
[ENA]
¢þ
>WENV182864498
OKQD01000147
[OKQD] human gut metagenome; human gut
16655
16573
-
Tyr
GTA
[ENA]
¢þ
>WENV182864497
OKQD01000147
[OKQD] human gut metagenome; human gut
16732
16660
-
Phe
GAA
[ENA]
¢þ
>WENV182864496
OKQD01000147
[OKQD] human gut metagenome; human gut
16853
16778
-
Asp
GTC
[ENA]
¢þ
>WENV182864495
OKQD01000147
[OKQD] human gut metagenome; human gut
16937
16863
-
Val
TAC
[ENA]
¢þ
>WENV182864494
OKQD01000132
[OKQD] human gut metagenome; human gut
18470
18542
+
Thr
CGT
[ENA]
¢þ
>WENV182864490
OKQD01000115
[OKQD] human gut metagenome; human gut
20580
20655
+
Thr
TGT
[ENA]
¢þ
>WENV182864491
OKQD01000115
[OKQD] human gut metagenome; human gut
20664
20748
+
Tyr
GTA
[ENA]
¢þ
>WENV182864492
OKQD01000115
[OKQD] human gut metagenome; human gut
20865
20939
+
Gly
TCC
[ENA]
¢þ
>WENV182864493
OKQD01000115
[OKQD] human gut metagenome; human gut
20946
21021
+
Thr
GGT
[ENA]
¢þ
>WENV182864455
OKQD01000024
[OKQD] human gut metagenome; human gut
22755
22842
+
Ser
GGA
[ENA]
¢þ
>WENV182864482
OKQD01000086
[OKQD] human gut metagenome; human gut
24399
24474
+
Asp
GTC
[ENA]
¢þ
>WENV182864483
OKQD01000086
[OKQD] human gut metagenome; human gut
24480
24555
+
Phe
GAA
[ENA]
¢þ
>WENV182864484
OKQD01000086
[OKQD] human gut metagenome; human gut
24563
24637
+
Gly
GCC
[ENA]
¢þ
>WENV182864485
OKQD01000086
[OKQD] human gut metagenome; human gut
24647
24721
+
Cys
GCA
[ENA]
¢þ
>WENV182864486
OKQD01000086
[OKQD] human gut metagenome; human gut
24736
24824
+
Leu
TAA
[ENA]
¢þ
>WENV182864432
OKQD01000001
[OKQD] human gut metagenome; human gut
25111
25027
-
Tyr
GTA
[ENA]
¢þ
>WENV182864431
OKQD01000001
[OKQD] human gut metagenome; human gut
25230
25146
-
Tyr
GTA
[ENA]
¢þ
>WENV182864456
OKQD01000024
[OKQD] human gut metagenome; human gut
25684
25771
+
Ser
GGA
[ENA]
¢þ
>WENV182864475
OKQD01000065
[OKQD] human gut metagenome; human gut
27859
27935
+
Met
CAT
[ENA]
¢þ
>WENV182864476
OKQD01000065
[OKQD] human gut metagenome; human gut
27944
28028
+
Leu
TAG
[ENA]
¢þ
>WENV182864477
OKQD01000065
[OKQD] human gut metagenome; human gut
28052
28126
+
Gln
TTG
[ENA]
¢þ
>WENV182864478
OKQD01000065
[OKQD] human gut metagenome; human gut
28159
28233
+
Gln
TTG
[ENA]
¢þ
>WENV182864466
OKQD01000045
[OKQD] human gut metagenome; human gut
28233
28308
+
Arg
CCT
[ENA]
¢þ
>WENV182864479
OKQD01000065
[OKQD] human gut metagenome; human gut
28251
28327
+
Met
CAT
[ENA]
¢þ
>WENV182864480
OKQD01000065
[OKQD] human gut metagenome; human gut
28369
28443
+
Gln
CTG
[ENA]
¢þ
>WENV182864481
OKQD01000065
[OKQD] human gut metagenome; human gut
28478
28552
+
Gln
CTG
[ENA]
¢þ
>WENV182864471
OKQD01000060
[OKQD] human gut metagenome; human gut
31243
31319
+
Arg
TCT
[ENA]
¢þ
>WENV182864467
OKQD01000049
[OKQD] human gut metagenome; human gut
31308
31232
-
Asp
GTC
[ENA]
¢þ
>WENV182864465
OKQD01000039
[OKQD] human gut metagenome; human gut
32484
32408
-
Pro
TGG
[ENA]
¢þ
>WENV182864464
OKQD01000039
[OKQD] human gut metagenome; human gut
32615
32529
-
Leu
CAG
[ENA]
¢þ
>WENV182864463
OKQD01000039
[OKQD] human gut metagenome; human gut
32712
32637
-
His
GTG
[ENA]
¢þ
>WENV182864462
OKQD01000039
[OKQD] human gut metagenome; human gut
32856
32780
-
Arg
CCG
[ENA]
¢þ
>WENV182864435
OKQD01000003
[OKQD] human gut metagenome; human gut
33647
33721
+
Thr
TGT
[ENA]
¢þ
>WENV182864469
OKQD01000058
[OKQD] human gut metagenome; human gut
34391
34316
-
Asn
GTT
[ENA]
¢þ
>WENV182864461
OKQD01000037
[OKQD] human gut metagenome; human gut
36308
36232
-
Val
GAC
[ENA]
¢þ
>WENV182864460
OKQD01000037
[OKQD] human gut metagenome; human gut
36389
36313
-
Val
GAC
[ENA]
¢þ
>WENV182864434
OKQD01000002
[OKQD] human gut metagenome; human gut
58803
58727
-
fMet
CAT
[ENA]
¢þ
>WENV182864436
OKQD01000004
[OKQD] human gut metagenome; human gut
58870
58946
+
Arg
TCT
[ENA]
¢þ
>WENV182864433
OKQD01000002
[OKQD] human gut metagenome; human gut
60710
60624
-
Leu
GAG
[ENA]
¢þ
>WENV182864452
OKQD01000015
[OKQD] human gut metagenome; human gut
63791
63885
+
SeC
TCA
[ENA]
¢þ
>WENV182864447
OKQD01000012
[OKQD] human gut metagenome; human gut
64924
64849
-
Gly
GCC
[ENA]
¢þ
>WENV182864446
OKQD01000012
[OKQD] human gut metagenome; human gut
65045
64970
-
Gly
GCC
[ENA]
¢þ
>WENV182864445
OKQD01000012
[OKQD] human gut metagenome; human gut
65166
65091
-
Gly
GCC
[ENA]
¢þ
>WENV182864451
OKQD01000013
[OKQD] human gut metagenome; human gut
67224
67138
-
Leu
TAA
[ENA]
¢þ
>WENV182864450
OKQD01000013
[OKQD] human gut metagenome; human gut
67309
67236
-
Cys
GCA
[ENA]
¢þ
>WENV182864449
OKQD01000013
[OKQD] human gut metagenome; human gut
67436
67361
-
Gly
GCC
[ENA]
¢þ
>WENV182864443
OKQD01000011
[OKQD] human gut metagenome; human gut
73473
73400
-
Gly
CCC
[ENA]
¢þ
>WENV182864439
OKQD01000006
[OKQD] human gut metagenome; human gut
74841
74766
-
Phe
GAA
[ENA]
¢þ
>WENV182864454
OKQD01000020
[OKQD] human gut metagenome; human gut
76069
75993
-
Arg
ACG
[ENA]
¢þ
>WENV182864453
OKQD01000017
[OKQD] human gut metagenome; human gut
76764
76836
+
Arg
CCT
[ENA]
¢þ
>WENV182864444
OKQD01000012
[OKQD] human gut metagenome; human gut
98387
98462
+
Phe
GAA
[ENA]
¢þ
>WENV182864440
OKQD01000008
[OKQD] human gut metagenome; human gut
99010
99096
+
Leu
CAG
[ENA]
¢þ
>WENV182864441
OKQD01000008
[OKQD] human gut metagenome; human gut
99125
99210
+
Leu
CAG
[ENA]
¢þ
>WENV182864442
OKQD01000008
[OKQD] human gut metagenome; human gut
99243
99329
+
Leu
CAG
[ENA]
¢þ
>WENV182864437
OKQD01000004
[OKQD] human gut metagenome; human gut
104928
105015
+
Ser
TGA
[ENA]
¢þ
>WENV182864438
OKQD01000004
[OKQD] human gut metagenome; human gut
111362
111449
+
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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