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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKQF] human gut metagenome; human gut
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182864914
OKQF01001315
[OKQF] human gut metagenome; human gut
78
152
+
Gln
CTG
[ENA]
¢þ
>WENV182864875
OKQF01000074
[OKQF] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182864915
OKQF01001585
[OKQF] human gut metagenome; human gut
103
179
+
Ile
GAT
[ENA]
¢þ
>WENV182864894
OKQF01000186
[OKQF] human gut metagenome; human gut
133
59
-
Gln
TTG
[ENA]
¢þ
>WENV182864890
OKQF01000147
[OKQF] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182864859
OKQF01000038
[OKQF] human gut metagenome; human gut
163
89
-
Gln
TTG
[ENA]
¢þ
>WENV182864893
OKQF01000186
[OKQF] human gut metagenome; human gut
233
158
-
His
GTG
[ENA]
¢þ
>WENV182864858
OKQF01000038
[OKQF] human gut metagenome; human gut
285
201
-
Leu
TAG
[ENA]
¢þ
>WENV182864916
OKQF01001585
[OKQF] human gut metagenome; human gut
289
364
+
Ala
TGC
[ENA]
¢þ
>WENV182864897
OKQF01000352
[OKQF] human gut metagenome; human gut
340
266
-
Asn
GTT
[ENA]
¢þ
>WENV182864857
OKQF01000038
[OKQF] human gut metagenome; human gut
370
294
-
Met
CAT
[ENA]
¢þ
>WENV182864903
OKQF01000607
[OKQF] human gut metagenome; human gut
370
295
-
Thr
GGT
[ENA]
¢þ
>WENV182864902
OKQF01000607
[OKQF] human gut metagenome; human gut
450
376
-
Gly
TCC
[ENA]
¢þ
>WENV182864870
OKQF01000052
[OKQF] human gut metagenome; human gut
482
406
-
Pro
GGG
[ENA]
¢þ
>WENV182864918
OKQF01001730
[OKQF] human gut metagenome; human gut
519
443
-
Arg
ACG
[ENA]
¢þ
>WENV182864901
OKQF01000607
[OKQF] human gut metagenome; human gut
654
570
-
Tyr
GTA
[ENA]
¢þ
>WENV182864917
OKQF01001730
[OKQF] human gut metagenome; human gut
707
632
-
Trp
CCA
[ENA]
¢þ
>WENV182864911
OKQF01001060
[OKQF] human gut metagenome; human gut
730
814
+
Leu
CAA
[ENA]
¢þ
>WENV182864900
OKQF01000607
[OKQF] human gut metagenome; human gut
740
665
-
Thr
TGT
[ENA]
¢þ
>WENV182864909
OKQF01000908
[OKQF] human gut metagenome; human gut
742
666
-
Arg
TCT
[ENA]
¢þ
>WENV182864907
OKQF01000786
[OKQF] human gut metagenome; human gut
752
842
+
Ser
GCT
[ENA]
¢þ
>WENV182864919
OKQF01001805
[OKQF] human gut metagenome; human gut
800
715
-
Leu
CAG
[ENA]
¢þ
>WENV182864876
OKQF01000076
[OKQF] human gut metagenome; human gut
1005
1080
+
Ala
GGC
[ENA]
¢þ
>WENV182864860
OKQF01000039
[OKQF] human gut metagenome; human gut
1071
1146
+
Asn
GTT
[ENA]
¢þ
>WENV182864877
OKQF01000076
[OKQF] human gut metagenome; human gut
1122
1197
+
Ala
GGC
[ENA]
¢þ
>WENV182864913
OKQF01001246
[OKQF] human gut metagenome; human gut
1629
1555
-
Gln
CTG
[ENA]
¢þ
>WENV182864891
OKQF01000152
[OKQF] human gut metagenome; human gut
1667
1751
+
Leu
TAG
[ENA]
¢þ
>WENV182864912
OKQF01001246
[OKQF] human gut metagenome; human gut
1798
1724
-
Gln
CTG
[ENA]
¢þ
>WENV182864899
OKQF01000504
[OKQF] human gut metagenome; human gut
1860
1936
+
fMet
CAT
[ENA]
¢þ
>WENV182864908
OKQF01000841
[OKQF] human gut metagenome; human gut
1879
1952
+
Gly
CCC
[ENA]
¢þ
>WENV182864904
OKQF01000764
[OKQF] human gut metagenome; human gut
1934
2010
+
Pro
TGG
[ENA]
¢þ
>WENV182864905
OKQF01000764
[OKQF] human gut metagenome; human gut
2021
2094
+
Gly
TCC
[ENA]
¢þ
>WENV182864906
OKQF01000764
[OKQF] human gut metagenome; human gut
2200
2276
+
Arg
TCT
[ENA]
¢þ
>WENV182864910
OKQF01000916
[OKQF] human gut metagenome; human gut
2733
2645
-
Leu
TAA
[ENA]
¢þ
>WENV182864896
OKQF01000240
[OKQF] human gut metagenome; human gut
2980
2886
-
SeC
TCA
[ENA]
¢þ
>WENV182864889
OKQF01000138
[OKQF] human gut metagenome; human gut
3308
3384
+
Asp
GTC
[ENA]
¢þ
>WENV182864856
OKQF01000028
[OKQF] human gut metagenome; human gut
3313
3389
+
Arg
TCT
[ENA]
¢þ
>WENV182864874
OKQF01000073
[OKQF] human gut metagenome; human gut
4031
3947
-
Leu
CAA
[ENA]
¢þ
>WENV182864898
OKQF01000401
[OKQF] human gut metagenome; human gut
6081
6156
+
Lys
CTT
[ENA]
¢þ
>WENV182864895
OKQF01000213
[OKQF] human gut metagenome; human gut
8322
8412
+
Ser
GGA
[ENA]
¢þ
>WENV182864882
OKQF01000078
[OKQF] human gut metagenome; human gut
9162
9072
-
Ser
CGA
[ENA]
¢þ
>WENV182864851
OKQF01000025
[OKQF] human gut metagenome; human gut
10266
10341
+
Phe
GAA
[ENA]
¢þ
>WENV182864888
OKQF01000122
[OKQF] human gut metagenome; human gut
13451
13375
-
Arg
CCT
[ENA]
¢þ
>WENV182864892
OKQF01000164
[OKQF] human gut metagenome; human gut
13606
13689
+
Leu
CAA
[ENA]
¢þ
>WENV182864864
OKQF01000044
[OKQF] human gut metagenome; human gut
14499
14425
-
Arg
CCG
[ENA]
¢þ
>WENV182864883
OKQF01000121
[OKQF] human gut metagenome; human gut
16792
16867
+
Thr
TGT
[ENA]
¢þ
>WENV182864884
OKQF01000121
[OKQF] human gut metagenome; human gut
16878
16962
+
Tyr
GTA
[ENA]
¢þ
>WENV182864885
OKQF01000121
[OKQF] human gut metagenome; human gut
16968
17043
+
fMet
CAT
[ENA]
¢þ
>WENV182864886
OKQF01000121
[OKQF] human gut metagenome; human gut
17075
17150
+
Thr
GGT
[ENA]
¢þ
>WENV182864887
OKQF01000121
[OKQF] human gut metagenome; human gut
17156
17232
+
Met
CAT
[ENA]
¢þ
>WENV182864863
OKQF01000039
[OKQF] human gut metagenome; human gut
19234
19159
-
Asn
GTT
[ENA]
¢þ
>WENV182864837
OKQF01000007
[OKQF] human gut metagenome; human gut
19724
19811
+
Ser
TGA
[ENA]
¢þ
>WENV182864878
OKQF01000076
[OKQF] human gut metagenome; human gut
20694
20621
-
Arg
CCT
[ENA]
¢þ
>WENV182864861
OKQF01000039
[OKQF] human gut metagenome; human gut
21010
21085
+
Asn
GTT
[ENA]
¢þ
>WENV182864873
OKQF01000072
[OKQF] human gut metagenome; human gut
23213
23125
-
Ser
TGA
[ENA]
¢þ
>WENV182864879
OKQF01000077
[OKQF] human gut metagenome; human gut
25409
25484
+
Asp
GTC
[ENA]
¢þ
>WENV182864880
OKQF01000077
[OKQF] human gut metagenome; human gut
25490
25565
+
Phe
GAA
[ENA]
¢þ
>WENV182864881
OKQF01000077
[OKQF] human gut metagenome; human gut
25578
25663
+
Leu
GAG
[ENA]
¢þ
>WENV182864848
OKQF01000021
[OKQF] human gut metagenome; human gut
27272
27347
+
Phe
GAA
[ENA]
¢þ
>WENV182864872
OKQF01000059
[OKQF] human gut metagenome; human gut
33377
33302
-
Ile2
CAT
[ENA]
¢þ
>WENV182864871
OKQF01000058
[OKQF] human gut metagenome; human gut
35203
35277
+
Ile2
CAT
[ENA]
¢þ
>WENV182864865
OKQF01000045
[OKQF] human gut metagenome; human gut
43488
43562
+
Gly
GCC
[ENA]
¢þ
>WENV182864866
OKQF01000045
[OKQF] human gut metagenome; human gut
43568
43643
+
Asn
GTT
[ENA]
¢þ
>WENV182864867
OKQF01000045
[OKQF] human gut metagenome; human gut
43647
43722
+
Lys
TTT
[ENA]
¢þ
>WENV182864868
OKQF01000045
[OKQF] human gut metagenome; human gut
43728
43802
+
Glu
TTC
[ENA]
¢þ
>WENV182864869
OKQF01000045
[OKQF] human gut metagenome; human gut
43808
43883
+
Val
TAC
[ENA]
¢þ
>WENV182864862
OKQF01000039
[OKQF] human gut metagenome; human gut
44930
45005
+
Asn
GTT
[ENA]
¢þ
>WENV182864850
OKQF01000024
[OKQF] human gut metagenome; human gut
47107
47032
-
Thr
CGT
[ENA]
¢þ
>WENV182864844
OKQF01000016
[OKQF] human gut metagenome; human gut
48498
48404
-
SeC
TCA
[ENA]
¢þ
>WENV182864855
OKQF01000027
[OKQF] human gut metagenome; human gut
54108
54032
-
Pro
TGG
[ENA]
¢þ
>WENV182864854
OKQF01000027
[OKQF] human gut metagenome; human gut
54240
54154
-
Leu
CAG
[ENA]
¢þ
>WENV182864853
OKQF01000027
[OKQF] human gut metagenome; human gut
54338
54263
-
His
GTG
[ENA]
¢þ
>WENV182864852
OKQF01000027
[OKQF] human gut metagenome; human gut
54470
54394
-
Arg
CCG
[ENA]
¢þ
>WENV182864847
OKQF01000018
[OKQF] human gut metagenome; human gut
67171
67085
-
Leu
TAA
[ENA]
¢þ
>WENV182864846
OKQF01000018
[OKQF] human gut metagenome; human gut
67258
67185
-
Cys
GCA
[ENA]
¢þ
>WENV182864845
OKQF01000018
[OKQF] human gut metagenome; human gut
67372
67297
-
Gly
GCC
[ENA]
¢þ
>WENV182864849
OKQF01000022
[OKQF] human gut metagenome; human gut
75536
75450
-
Leu
CAG
[ENA]
¢þ
>WENV182864841
OKQF01000009
[OKQF] human gut metagenome; human gut
84196
84123
-
Gly
CCC
[ENA]
¢þ
>WENV182864843
OKQF01000013
[OKQF] human gut metagenome; human gut
84609
84533
-
Arg
ACG
[ENA]
¢þ
>WENV182864842
OKQF01000013
[OKQF] human gut metagenome; human gut
84878
84802
-
Arg
ACG
[ENA]
¢þ
>WENV182864840
OKQF01000008
[OKQF] human gut metagenome; human gut
92400
92324
-
Pro
CGG
[ENA]
¢þ
>WENV182864839
OKQF01000007
[OKQF] human gut metagenome; human gut
115790
115703
-
Ser
GGA
[ENA]
¢þ
>WENV182864836
OKQF01000005
[OKQF] human gut metagenome; human gut
117559
117483
-
fMet
CAT
[ENA]
¢þ
>WENV182864835
OKQF01000005
[OKQF] human gut metagenome; human gut
117670
117594
-
fMet
CAT
[ENA]
¢þ
>WENV182864834
OKQF01000005
[OKQF] human gut metagenome; human gut
117781
117705
-
fMet
CAT
[ENA]
¢þ
>WENV182864838
OKQF01000007
[OKQF] human gut metagenome; human gut
118763
118676
-
Ser
GGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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