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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKXM] human gut metagenome; human gut
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182973690
OKXM01000061
[OKXM] human gut metagenome; human gut
3
89
+
Leu
CAG
[ENA]
¢þ
>WENV182973709
OKXM01000594
[OKXM] human gut metagenome; human gut
13
85
+
Arg
CCT
[ENA]
¢þ
>WENV182973763
OKXM01005304
[OKXM] human gut metagenome; human gut
28
112
+
Leu
AAG
[ENA]
¢þ
>WENV182973738
OKXM01002616
[OKXM] human gut metagenome; human gut
41
113
+
Glu
TTC
[ENA]
¢þ
>WENV182973711
OKXM01000756
[OKXM] human gut metagenome; human gut
85
158
+
fMet
CAT
[ENA]
¢þ
>WENV182973759
OKXM01005026
[OKXM] human gut metagenome; human gut
91
166
+
Gly
GCC
[ENA]
¢þ
>WENV182973721
OKXM01001231
[OKXM] human gut metagenome; human gut
93
9
-
Tyr
GTA
[ENA]
¢þ
>WENV182973771
OKXM01006197
[OKXM] human gut metagenome; human gut
98
174
+
fMet
CAT
[ENA]
¢þ
>WENV182973764
OKXM01005304
[OKXM] human gut metagenome; human gut
125
213
+
Leu
TAA
[ENA]
¢þ
>WENV182973770
OKXM01005925
[OKXM] human gut metagenome; human gut
130
225
+
Ser
GCT
[ENA]
¢þ
>WENV182973691
OKXM01000061
[OKXM] human gut metagenome; human gut
132
208
+
Pro
TGG
[ENA]
¢þ
>WENV182973713
OKXM01000859
[OKXM] human gut metagenome; human gut
140
211
+
Gln
CTG
[ENA]
¢þ
>WENV182973747
OKXM01004209
[OKXM] human gut metagenome; human gut
145
62
-
Tyr
GTA
[ENA]
¢þ
>WENV182973745
OKXM01003779
[OKXM] human gut metagenome; human gut
152
76
-
Ile2
CAT
[ENA]
¢þ
>WENV182973689
OKXM01000058
[OKXM] human gut metagenome; human gut
156
82
-
Asn
GTT
[ENA]
¢þ
>WENV182973734
OKXM01002010
[OKXM] human gut metagenome; human gut
157
83
-
Asp
GTC
[ENA]
¢þ
>WENV182973720
OKXM01001231
[OKXM] human gut metagenome; human gut
177
102
-
Thr
TGT
[ENA]
¢þ
>WENV182973758
OKXM01004952
[OKXM] human gut metagenome; human gut
201
110
-
Ser
TGA
[ENA]
¢þ
>WENV182973744
OKXM01003592
[OKXM] human gut metagenome; human gut
203
290
+
Ser
GGA
[ENA]
¢þ
>WENV182973760
OKXM01005026
[OKXM] human gut metagenome; human gut
220
293
+
Cys
GCA
[ENA]
¢þ
>WENV182973739
OKXM01002809
[OKXM] human gut metagenome; human gut
220
307
+
Ser
GCT
[ENA]
¢þ
>WENV182973765
OKXM01005304
[OKXM] human gut metagenome; human gut
225
311
+
Leu
AAG
[ENA]
¢þ
>WENV182973762
OKXM01005093
[OKXM] human gut metagenome; human gut
251
175
-
Met
CAT
[ENA]
¢þ
>WENV182973772
OKXM01006197
[OKXM] human gut metagenome; human gut
251
327
+
fMet
CAT
[ENA]
¢þ
>WENV182973776
OKXM01006365
[OKXM] human gut metagenome; human gut
271
346
+
Ile2
CAT
[ENA]
¢þ
>WENV182973761
OKXM01005026
[OKXM] human gut metagenome; human gut
306
392
+
Leu
TAA
[ENA]
¢þ
>WENV182973766
OKXM01005304
[OKXM] human gut metagenome; human gut
312
396
+
Leu
CAG
[ENA]
¢þ
>WENV182973748
OKXM01004613
[OKXM] human gut metagenome; human gut
332
405
+
Lys
CTT
[ENA]
¢þ
>WENV182973716
OKXM01000930
[OKXM] human gut metagenome; human gut
333
417
+
Leu
CAA
[ENA]
¢þ
>WENV182973736
OKXM01002430
[OKXM] human gut metagenome; human gut
353
264
-
Ser
CGA
[ENA]
¢þ
>WENV182973753
OKXM01004812
[OKXM] human gut metagenome; human gut
355
279
-
Arg
ACG
[ENA]
¢þ
>WENV182973757
OKXM01004952
[OKXM] human gut metagenome; human gut
360
284
-
Asn
GTT
[ENA]
¢þ
>WENV182973777
OKXM01006421
[OKXM] human gut metagenome; human gut
363
437
+
Arg
CCT
[ENA]
¢þ
>WENV182973775
OKXM01006291
[OKXM] human gut metagenome; human gut
373
284
-
Ser
TGA
[ENA]
¢þ
>WENV182973740
OKXM01002809
[OKXM] human gut metagenome; human gut
385
457
+
Glu
CTC
[ENA]
¢þ
>WENV182973735
OKXM01002219
[OKXM] human gut metagenome; human gut
397
312
-
Ser
TGA
[ENA]
¢þ
>WENV182973767
OKXM01005304
[OKXM] human gut metagenome; human gut
410
493
+
Leu
AAG
[ENA]
¢þ
>WENV182973696
OKXM01000183
[OKXM] human gut metagenome; human gut
411
487
+
Met
CAT
[ENA]
¢þ
>WENV182973746
OKXM01004007
[OKXM] human gut metagenome; human gut
422
347
-
Thr
CGT
[ENA]
¢þ
>WENV182973773
OKXM01006265
[OKXM] human gut metagenome; human gut
425
498
+
Thr
CGT
[ENA]
¢þ
>WENV182973752
OKXM01004812
[OKXM] human gut metagenome; human gut
435
362
-
Gly
GCC
[ENA]
¢þ
>WENV182973756
OKXM01004952
[OKXM] human gut metagenome; human gut
441
367
-
Trp
CCA
[ENA]
¢þ
>WENV182973708
OKXM01000581
[OKXM] human gut metagenome; human gut
454
527
+
Gly
CCC
[ENA]
¢þ
>WENV182973741
OKXM01003461
[OKXM] human gut metagenome; human gut
494
568
+
Ala
GGC
[ENA]
¢þ
>WENV182973768
OKXM01005304
[OKXM] human gut metagenome; human gut
494
582
+
Leu
TAG
[ENA]
¢þ
>WENV182973749
OKXM01004633
[OKXM] human gut metagenome; human gut
505
580
+
Gly
TCC
[ENA]
¢þ
>WENV182973751
OKXM01004812
[OKXM] human gut metagenome; human gut
511
436
-
Val
TAC
[ENA]
¢þ
>WENV182973769
OKXM01005905
[OKXM] human gut metagenome; human gut
519
445
-
Gly
GCC
[ENA]
¢þ
>WENV182973755
OKXM01004952
[OKXM] human gut metagenome; human gut
530
442
-
Asn
GTT
[ENA]
¢þ
>WENV182973774
OKXM01006291
[OKXM] human gut metagenome; human gut
535
462
-
Trp
CCA
[ENA]
¢þ
>WENV182973750
OKXM01004812
[OKXM] human gut metagenome; human gut
588
514
-
Gly
TCC
[ENA]
¢þ
>WENV182973754
OKXM01004952
[OKXM] human gut metagenome; human gut
627
534
-
Ser
GCT
[ENA]
¢þ
>WENV182973729
OKXM01001826
[OKXM] human gut metagenome; human gut
659
583
-
Arg
TCT
[ENA]
¢þ
>WENV182973737
OKXM01002461
[OKXM] human gut metagenome; human gut
677
750
+
Gly
CCC
[ENA]
¢þ
>WENV182973728
OKXM01001826
[OKXM] human gut metagenome; human gut
749
673
-
Arg
TCG
[ENA]
¢þ
>WENV182973743
OKXM01003505
[OKXM] human gut metagenome; human gut
752
676
-
Val
GAC
[ENA]
¢þ
>WENV182973732
OKXM01001974
[OKXM] human gut metagenome; human gut
820
746
-
Arg
TCT
[ENA]
¢þ
>WENV182973727
OKXM01001826
[OKXM] human gut metagenome; human gut
832
757
-
Ile2
CAT
[ENA]
¢þ
>WENV182973742
OKXM01003505
[OKXM] human gut metagenome; human gut
833
757
-
Val
GAC
[ENA]
¢þ
>WENV182973701
OKXM01000401
[OKXM] human gut metagenome; human gut
899
816
-
Tyr
GTA
[ENA]
¢þ
>WENV182973733
OKXM01001981
[OKXM] human gut metagenome; human gut
910
994
+
Leu
CAA
[ENA]
¢þ
>WENV182973722
OKXM01001264
[OKXM] human gut metagenome; human gut
912
987
+
Asn
GTT
[ENA]
¢þ
>WENV182973700
OKXM01000401
[OKXM] human gut metagenome; human gut
1047
973
-
Thr
TGT
[ENA]
¢þ
>WENV182973719
OKXM01001106
[OKXM] human gut metagenome; human gut
1199
1125
-
Ile2
CAT
[ENA]
¢þ
>WENV182973731
OKXM01001956
[OKXM] human gut metagenome; human gut
1205
1130
-
Trp
CCA
[ENA]
¢þ
>WENV182973703
OKXM01000417
[OKXM] human gut metagenome; human gut
1227
1154
-
Pro
CGG
[ENA]
¢þ
>WENV182973730
OKXM01001956
[OKXM] human gut metagenome; human gut
1290
1214
-
Asp
GTC
[ENA]
¢þ
>WENV182973724
OKXM01001458
[OKXM] human gut metagenome; human gut
1293
1366
+
Trp
CCA
[ENA]
¢þ
>WENV182973702
OKXM01000417
[OKXM] human gut metagenome; human gut
1312
1239
-
Phe
GAA
[ENA]
¢þ
>WENV182973725
OKXM01001592
[OKXM] human gut metagenome; human gut
1321
1396
+
Ile2
CAT
[ENA]
¢þ
>WENV182973706
OKXM01000485
[OKXM] human gut metagenome; human gut
1416
1332
-
Leu
TAA
[ENA]
¢þ
>WENV182973723
OKXM01001431
[OKXM] human gut metagenome; human gut
1477
1389
-
Ser
GGA
[ENA]
¢þ
>WENV182973726
OKXM01001592
[OKXM] human gut metagenome; human gut
1498
1573
+
Arg
TCT
[ENA]
¢þ
>WENV182973705
OKXM01000485
[OKXM] human gut metagenome; human gut
1503
1430
-
Gly
GCC
[ENA]
¢þ
>WENV182973707
OKXM01000526
[OKXM] human gut metagenome; human gut
1582
1507
-
Phe
GAA
[ENA]
¢þ
>WENV182973718
OKXM01001061
[OKXM] human gut metagenome; human gut
1735
1660
-
Thr
GGT
[ENA]
¢þ
>WENV182973717
OKXM01001061
[OKXM] human gut metagenome; human gut
1816
1742
-
Gly
TCC
[ENA]
¢þ
>WENV182973715
OKXM01000925
[OKXM] human gut metagenome; human gut
1878
1803
-
Pro
GGG
[ENA]
¢þ
>WENV182973714
OKXM01000895
[OKXM] human gut metagenome; human gut
1961
2036
+
Val
TAC
[ENA]
¢þ
>WENV182973710
OKXM01000619
[OKXM] human gut metagenome; human gut
2072
2144
+
Cys
GCA
[ENA]
¢þ
>WENV182973712
OKXM01000807
[OKXM] human gut metagenome; human gut
2102
2178
+
Met
CAT
[ENA]
¢þ
>WENV182973704
OKXM01000482
[OKXM] human gut metagenome; human gut
2523
2598
+
Pro
TGG
[ENA]
¢þ
>WENV182973697
OKXM01000218
[OKXM] human gut metagenome; human gut
2753
2826
+
Lys
TTT
[ENA]
¢þ
>WENV182973695
OKXM01000108
[OKXM] human gut metagenome; human gut
3131
3225
+
SeC
TCA
[ENA]
¢þ
>WENV182973698
OKXM01000311
[OKXM] human gut metagenome; human gut
3225
3301
+
Arg
CCG
[ENA]
¢þ
>WENV182973693
OKXM01000082
[OKXM] human gut metagenome; human gut
3330
3256
-
Ala
TGC
[ENA]
¢þ
>WENV182973699
OKXM01000311
[OKXM] human gut metagenome; human gut
3360
3435
+
His
GTG
[ENA]
¢þ
>WENV182973694
OKXM01000104
[OKXM] human gut metagenome; human gut
3392
3317
-
Glu
TTC
[ENA]
¢þ
>WENV182973692
OKXM01000082
[OKXM] human gut metagenome; human gut
3435
3359
-
Ile
GAT
[ENA]
¢þ
>WENV182973688
OKXM01000024
[OKXM] human gut metagenome; human gut
3512
3583
+
Gln
TTG
[ENA]
¢þ
>WENV182973687
OKXM01000008
[OKXM] human gut metagenome; human gut
8487
8405
-
Leu
TAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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