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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKZG] human gut metagenome; human gut
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182983440
OKZG01000791
[OKZG] human gut metagenome; human gut
3
82
+
Leu
CAA
[ENA]
¢þ
>WENV182983414
OKZG01000093
[OKZG] human gut metagenome; human gut
8
81
+
Lys
TTT
[ENA]
¢þ
>WENV182983410
OKZG01000004
[OKZG] human gut metagenome; human gut
63
136
+
Pro
CGG
[ENA]
¢þ
>WENV182983488
OKZG01005110
[OKZG] human gut metagenome; human gut
65
151
+
Leu
CAG
[ENA]
¢þ
>WENV182983504
OKZG01006442
[OKZG] human gut metagenome; human gut
74
1
-
Trp
CCA
[ENA]
¢þ
>WENV182983447
OKZG01001011
[OKZG] human gut metagenome; human gut
75
3
-
Glu
TTC
[ENA]
¢þ
>WENV182983439
OKZG01000745
[OKZG] human gut metagenome; human gut
80
155
+
Pro
TGG
[ENA]
¢þ
>WENV182983503
OKZG01006193
[OKZG] human gut metagenome; human gut
88
13
-
Ala
TGC
[ENA]
¢þ
>WENV182983499
OKZG01006071
[OKZG] human gut metagenome; human gut
100
25
-
Gly
CCC
[ENA]
¢þ
>WENV182983452
OKZG01001169
[OKZG] human gut metagenome; human gut
117
29
-
Ser
GGA
[ENA]
¢þ
>WENV182983443
OKZG01000888
[OKZG] human gut metagenome; human gut
124
197
+
Thr
CGT
[ENA]
¢þ
>WENV182983485
OKZG01004962
[OKZG] human gut metagenome; human gut
134
207
+
Thr
CGT
[ENA]
¢þ
>WENV182983484
OKZG01004844
[OKZG] human gut metagenome; human gut
144
60
-
Leu
TAG
[ENA]
¢þ
>WENV182983481
OKZG01004356
[OKZG] human gut metagenome; human gut
149
73
-
Arg
CCG
[ENA]
¢þ
>WENV182983509
OKZG01007396
[OKZG] human gut metagenome; human gut
149
223
+
Gly
TCC
[ENA]
¢þ
>WENV182983433
OKZG01000506
[OKZG] human gut metagenome; human gut
151
61
-
Ser
GCT
[ENA]
¢þ
>WENV182983496
OKZG01005845
[OKZG] human gut metagenome; human gut
160
85
-
Trp
CCA
[ENA]
¢þ
>WENV182983490
OKZG01005431
[OKZG] human gut metagenome; human gut
168
94
-
Glu
CTC
[ENA]
¢þ
>WENV182983502
OKZG01006193
[OKZG] human gut metagenome; human gut
175
99
-
Ile
GAT
[ENA]
¢þ
>WENV182983417
OKZG01000225
[OKZG] human gut metagenome; human gut
200
129
-
Gln
TTG
[ENA]
¢þ
>WENV182983513
OKZG01009888
[OKZG] human gut metagenome; human gut
210
282
+
Arg
CCT
[ENA]
¢þ
>WENV182983458
OKZG01001661
[OKZG] human gut metagenome; human gut
220
305
+
Tyr
GTA
[ENA]
¢þ
>WENV182983483
OKZG01004844
[OKZG] human gut metagenome; human gut
231
155
-
Met
CAT
[ENA]
¢þ
>WENV182983500
OKZG01006177
[OKZG] human gut metagenome; human gut
268
343
+
Thr
CGT
[ENA]
¢þ
>WENV182983432
OKZG01000506
[OKZG] human gut metagenome; human gut
271
184
-
Ser
TGA
[ENA]
¢þ
>WENV182983495
OKZG01005845
[OKZG] human gut metagenome; human gut
290
214
-
Asp
GTC
[ENA]
¢þ
>WENV182983497
OKZG01005870
[OKZG] human gut metagenome; human gut
293
218
-
Ala
GGC
[ENA]
¢þ
>WENV182983477
OKZG01003798
[OKZG] human gut metagenome; human gut
297
221
-
Asn
GTT
[ENA]
¢þ
>WENV182983510
OKZG01008623
[OKZG] human gut metagenome; human gut
314
387
+
Gly
CCC
[ENA]
¢þ
>WENV182983506
OKZG01007088
[OKZG] human gut metagenome; human gut
352
279
-
Pro
CGG
[ENA]
¢þ
>WENV182983514
OKZG01010373
[OKZG] human gut metagenome; human gut
358
433
+
Phe
GAA
[ENA]
¢þ
>WENV182983512
OKZG01009671
[OKZG] human gut metagenome; human gut
360
444
+
Leu
CAA
[ENA]
¢þ
>WENV182983487
OKZG01004983
[OKZG] human gut metagenome; human gut
366
283
-
Leu
TAA
[ENA]
¢þ
>WENV182983507
OKZG01007185
[OKZG] human gut metagenome; human gut
401
328
-
Ala
CGC
[ENA]
¢þ
>WENV182983425
OKZG01000304
[OKZG] human gut metagenome; human gut
404
479
+
His
GTG
[ENA]
¢þ
>WENV182983473
OKZG01002956
[OKZG] human gut metagenome; human gut
421
349
-
Pro
TGG
[ENA]
¢þ
>WENV182983466
OKZG01001879
[OKZG] human gut metagenome; human gut
438
363
-
Thr
GGT
[ENA]
¢þ
>WENV182983469
OKZG01002339
[OKZG] human gut metagenome; human gut
455
370
-
Ser
TGA
[ENA]
¢þ
>WENV182983505
OKZG01007088
[OKZG] human gut metagenome; human gut
455
382
-
Gln
CTG
[ENA]
¢þ
>WENV182983416
OKZG01000142
[OKZG] human gut metagenome; human gut
457
545
+
Ser
GGA
[ENA]
¢þ
>WENV182983494
OKZG01005797
[OKZG] human gut metagenome; human gut
487
413
-
Glu
CTC
[ENA]
¢þ
>WENV182983459
OKZG01001709
[OKZG] human gut metagenome; human gut
491
416
-
Gly
CCC
[ENA]
¢þ
>WENV182983508
OKZG01007303
[OKZG] human gut metagenome; human gut
498
587
+
Ser
CGA
[ENA]
¢þ
>WENV182983465
OKZG01001879
[OKZG] human gut metagenome; human gut
518
442
-
Asp
GTC
[ENA]
¢þ
>WENV182983511
OKZG01009052
[OKZG] human gut metagenome; human gut
528
444
-
Tyr
GTA
[ENA]
¢þ
>WENV182983476
OKZG01003439
[OKZG] human gut metagenome; human gut
547
621
+
Thr
TGT
[ENA]
¢þ
>WENV182983492
OKZG01005494
[OKZG] human gut metagenome; human gut
558
484
-
Thr
TGT
[ENA]
¢þ
>WENV182983479
OKZG01003963
[OKZG] human gut metagenome; human gut
558
633
+
Ile2
CAT
[ENA]
¢þ
>WENV182983493
OKZG01005797
[OKZG] human gut metagenome; human gut
565
490
-
Lys
CTT
[ENA]
¢þ
>WENV182983464
OKZG01001879
[OKZG] human gut metagenome; human gut
597
522
-
Val
TAC
[ENA]
¢þ
>WENV182983437
OKZG01000621
[OKZG] human gut metagenome; human gut
602
528
-
Asp
GTC
[ENA]
¢þ
>WENV182983435
OKZG01000570
[OKZG] human gut metagenome; human gut
620
695
+
Phe
GAA
[ENA]
¢þ
>WENV182983426
OKZG01000352
[OKZG] human gut metagenome; human gut
650
578
-
Arg
CCG
[ENA]
¢þ
>WENV182983501
OKZG01006183
[OKZG] human gut metagenome; human gut
650
579
-
Gln
TTG
[ENA]
¢þ
>WENV182983463
OKZG01001879
[OKZG] human gut metagenome; human gut
680
605
-
Gly
GCC
[ENA]
¢þ
>WENV182983498
OKZG01006006
[OKZG] human gut metagenome; human gut
691
762
+
Gln
CTG
[ENA]
¢þ
>WENV182983482
OKZG01004687
[OKZG] human gut metagenome; human gut
705
618
-
Ser
GGA
[ENA]
¢þ
>WENV182983491
OKZG01005459
[OKZG] human gut metagenome; human gut
706
620
-
Leu
GAG
[ENA]
¢þ
>WENV182983489
OKZG01005159
[OKZG] human gut metagenome; human gut
707
782
+
Asn
GTT
[ENA]
¢þ
>WENV182983480
OKZG01004096
[OKZG] human gut metagenome; human gut
730
806
+
Arg
CCG
[ENA]
¢þ
>WENV182983474
OKZG01003176
[OKZG] human gut metagenome; human gut
756
681
-
Lys
TTT
[ENA]
¢þ
>WENV182983467
OKZG01002025
[OKZG] human gut metagenome; human gut
851
777
-
Met
CAT
[ENA]
¢þ
>WENV182983453
OKZG01001245
[OKZG] human gut metagenome; human gut
860
933
+
Gly
CCC
[ENA]
¢þ
>WENV182983462
OKZG01001879
[OKZG] human gut metagenome; human gut
898
823
-
Phe
GAA
[ENA]
¢þ
>WENV182983486
OKZG01004972
[OKZG] human gut metagenome; human gut
909
984
+
Trp
CCA
[ENA]
¢þ
>WENV182983461
OKZG01001867
[OKZG] human gut metagenome; human gut
947
1022
+
Pro
GGG
[ENA]
¢þ
>WENV182983449
OKZG01001064
[OKZG] human gut metagenome; human gut
961
887
-
Ala
GGC
[ENA]
¢þ
>WENV182983444
OKZG01000925
[OKZG] human gut metagenome; human gut
1054
1128
+
Cys
GCA
[ENA]
¢þ
>WENV182983478
OKZG01003932
[OKZG] human gut metagenome; human gut
1155
1071
-
Leu
TAA
[ENA]
¢þ
>WENV182983475
OKZG01003387
[OKZG] human gut metagenome; human gut
1209
1133
-
Arg
TCT
[ENA]
¢þ
>WENV182983411
OKZG01000021
[OKZG] human gut metagenome; human gut
1233
1162
-
Gln
TTG
[ENA]
¢þ
>WENV182983455
OKZG01001310
[OKZG] human gut metagenome; human gut
1247
1173
-
Ala
GGC
[ENA]
¢þ
>WENV182983468
OKZG01002165
[OKZG] human gut metagenome; human gut
1281
1208
-
Arg
CCT
[ENA]
¢þ
>WENV182983472
OKZG01002896
[OKZG] human gut metagenome; human gut
1323
1414
+
Ser
GGA
[ENA]
¢þ
>WENV182983471
OKZG01002483
[OKZG] human gut metagenome; human gut
1333
1260
-
fMet
CAT
[ENA]
¢þ
>WENV182983460
OKZG01001815
[OKZG] human gut metagenome; human gut
1337
1255
-
Leu
CAA
[ENA]
¢þ
>WENV182983470
OKZG01002480
[OKZG] human gut metagenome; human gut
1478
1402
-
Trp
CCA
[ENA]
¢þ
>WENV182983441
OKZG01000820
[OKZG] human gut metagenome; human gut
1665
1739
+
Ile
GAT
[ENA]
¢þ
>WENV182983442
OKZG01000820
[OKZG] human gut metagenome; human gut
1756
1830
+
Ala
TGC
[ENA]
¢þ
>WENV182983445
OKZG01000925
[OKZG] human gut metagenome; human gut
1807
1894
+
Ser
GCT
[ENA]
¢þ
>WENV182983430
OKZG01000435
[OKZG] human gut metagenome; human gut
1981
2056
+
Val
GAC
[ENA]
¢þ
>WENV182983456
OKZG01001341
[OKZG] human gut metagenome; human gut
2001
2073
+
Arg
CCT
[ENA]
¢þ
>WENV182983454
OKZG01001284
[OKZG] human gut metagenome; human gut
2101
2019
-
Leu
TAG
[ENA]
¢þ
>WENV182983457
OKZG01001404
[OKZG] human gut metagenome; human gut
2194
2277
+
Leu
GAG
[ENA]
¢þ
>WENV182983446
OKZG01000925
[OKZG] human gut metagenome; human gut
2249
2323
+
Glu
CTC
[ENA]
¢þ
>WENV182983431
OKZG01000492
[OKZG] human gut metagenome; human gut
2349
2425
+
Arg
ACG
[ENA]
¢þ
>WENV182983413
OKZG01000079
[OKZG] human gut metagenome; human gut
2414
2340
-
Ile2
CAT
[ENA]
¢þ
>WENV182983450
OKZG01001106
[OKZG] human gut metagenome; human gut
2484
2557
+
Lys
CTT
[ENA]
¢þ
>WENV182983448
OKZG01001057
[OKZG] human gut metagenome; human gut
2576
2501
-
Thr
CGT
[ENA]
¢þ
>WENV182983451
OKZG01001106
[OKZG] human gut metagenome; human gut
2581
2654
+
Lys
CTT
[ENA]
¢þ
>WENV182983427
OKZG01000393
[OKZG] human gut metagenome; human gut
2936
3012
+
Val
TAC
[ENA]
¢þ
>WENV182983418
OKZG01000228
[OKZG] human gut metagenome; human gut
2974
2891
-
Tyr
GTA
[ENA]
¢þ
>WENV182983438
OKZG01000635
[OKZG] human gut metagenome; human gut
3209
3133
-
Val
CAC
[ENA]
¢þ
>WENV182983428
OKZG01000398
[OKZG] human gut metagenome; human gut
3231
3313
+
Leu
TAG
[ENA]
¢þ
>WENV182983436
OKZG01000607
[OKZG] human gut metagenome; human gut
3371
3442
+
Gln
CTG
[ENA]
¢þ
>WENV182983429
OKZG01000408
[OKZG] human gut metagenome; human gut
3392
3317
-
Glu
TTC
[ENA]
¢þ
>WENV182983434
OKZG01000567
[OKZG] human gut metagenome; human gut
3590
3515
-
Thr
GGT
[ENA]
¢þ
>WENV182983421
OKZG01000237
[OKZG] human gut metagenome; human gut
3780
3695
-
Leu
TAA
[ENA]
¢þ
>WENV182983420
OKZG01000237
[OKZG] human gut metagenome; human gut
3869
3796
-
Gly
GCC
[ENA]
¢þ
>WENV182983419
OKZG01000236
[OKZG] human gut metagenome; human gut
4329
4403
+
His
GTG
[ENA]
¢þ
>WENV182983422
OKZG01000284
[OKZG] human gut metagenome; human gut
4400
4488
+
Ser
GGA
[ENA]
¢þ
>WENV182983424
OKZG01000303
[OKZG] human gut metagenome; human gut
4597
4671
+
Met
CAT
[ENA]
¢þ
>WENV182983423
OKZG01000288
[OKZG] human gut metagenome; human gut
4645
4719
+
Asn
GTT
[ENA]
¢þ
>WENV182983415
OKZG01000118
[OKZG] human gut metagenome; human gut
4910
4994
+
Leu
CAA
[ENA]
¢þ
>WENV182983412
OKZG01000042
[OKZG] human gut metagenome; human gut
6161
6087
-
Ile2
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK