This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKZS] human gut metagenome; human gut
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182985952
OKZS01007920
[OKZS] human gut metagenome; human gut
44
116
+
Glu
CTC
[ENA]
¢þ
>WENV182985943
OKZS01005429
[OKZS] human gut metagenome; human gut
85
160
+
Ala
GGC
[ENA]
¢þ
>WENV182985844
OKZS01000001
[OKZS] human gut metagenome; human gut
89
161
+
Arg
CCT
[ENA]
¢þ
>WENV182985926
OKZS01003560
[OKZS] human gut metagenome; human gut
97
22
-
Gly
CCC
[ENA]
¢þ
>WENV182985939
OKZS01004609
[OKZS] human gut metagenome; human gut
99
27
-
Pro
TGG
[ENA]
¢þ
>WENV182985947
OKZS01006244
[OKZS] human gut metagenome; human gut
120
48
-
Glu
TTC
[ENA]
¢þ
>WENV182985949
OKZS01006316
[OKZS] human gut metagenome; human gut
134
58
-
Asp
GTC
[ENA]
¢þ
>WENV182985883
OKZS01000814
[OKZS] human gut metagenome; human gut
144
68
-
Arg
ACG
[ENA]
¢þ
>WENV182985955
OKZS01008294
[OKZS] human gut metagenome; human gut
148
75
-
Gly
GCC
[ENA]
¢þ
>WENV182985956
OKZS01009058
[OKZS] human gut metagenome; human gut
162
237
+
Gly
CCC
[ENA]
¢þ
>WENV182985888
OKZS01000981
[OKZS] human gut metagenome; human gut
172
101
-
Glu
TTC
[ENA]
¢þ
>WENV182985954
OKZS01008294
[OKZS] human gut metagenome; human gut
222
152
-
Gly
TCC
[ENA]
¢þ
>WENV182985930
OKZS01003709
[OKZS] human gut metagenome; human gut
234
159
-
Val
GAC
[ENA]
¢þ
>WENV182985944
OKZS01005463
[OKZS] human gut metagenome; human gut
242
316
+
Ala
TGC
[ENA]
¢þ
>WENV182985953
OKZS01008249
[OKZS] human gut metagenome; human gut
312
388
+
Ile2
CAT
[ENA]
¢þ
>WENV182985869
OKZS01000338
[OKZS] human gut metagenome; human gut
314
243
-
Gln
TTG
[ENA]
¢þ
>WENV182985887
OKZS01000981
[OKZS] human gut metagenome; human gut
340
264
-
Met
CAT
[ENA]
¢þ
>WENV182985925
OKZS01003208
[OKZS] human gut metagenome; human gut
359
285
-
Arg
TCT
[ENA]
¢þ
>WENV182985903
OKZS01001858
[OKZS] human gut metagenome; human gut
366
440
+
Thr
TGT
[ENA]
¢þ
>WENV182985948
OKZS01006316
[OKZS] human gut metagenome; human gut
386
311
-
Trp
CCA
[ENA]
¢þ
>WENV182985940
OKZS01004964
[OKZS] human gut metagenome; human gut
399
482
+
Leu
GAG
[ENA]
¢þ
>WENV182985957
OKZS01009221
[OKZS] human gut metagenome; human gut
405
331
-
Arg
TCT
[ENA]
¢þ
>WENV182985929
OKZS01003671
[OKZS] human gut metagenome; human gut
409
336
-
Lys
TTT
[ENA]
¢þ
>WENV182985880
OKZS01000744
[OKZS] human gut metagenome; human gut
437
511
+
Ala
GGC
[ENA]
¢þ
>WENV182985951
OKZS01007513
[OKZS] human gut metagenome; human gut
455
378
-
Asp
GTC
[ENA]
¢þ
>WENV182985910
OKZS01002267
[OKZS] human gut metagenome; human gut
466
541
+
Ala
TGC
[ENA]
¢þ
>WENV182985916
OKZS01002606
[OKZS] human gut metagenome; human gut
501
419
-
Leu
TAG
[ENA]
¢þ
>WENV182985945
OKZS01005566
[OKZS] human gut metagenome; human gut
504
431
-
Gln
CTG
[ENA]
¢þ
>WENV182985937
OKZS01004065
[OKZS] human gut metagenome; human gut
526
443
-
Leu
TAA
[ENA]
¢þ
>WENV182985907
OKZS01002124
[OKZS] human gut metagenome; human gut
543
458
-
Ser
TGA
[ENA]
¢þ
>WENV182985911
OKZS01002267
[OKZS] human gut metagenome; human gut
566
642
+
Ile
GAT
[ENA]
¢þ
>WENV182985912
OKZS01002410
[OKZS] human gut metagenome; human gut
591
510
-
Leu
TAG
[ENA]
¢þ
>WENV182985904
OKZS01001858
[OKZS] human gut metagenome; human gut
595
680
+
Tyr
GTA
[ENA]
¢þ
>WENV182985941
OKZS01005027
[OKZS] human gut metagenome; human gut
613
522
-
Ser
GGA
[ENA]
¢þ
>WENV182985875
OKZS01000606
[OKZS] human gut metagenome; human gut
629
556
-
Phe
GAA
[ENA]
¢þ
>WENV182985934
OKZS01003954
[OKZS] human gut metagenome; human gut
645
557
-
Ser
GGA
[ENA]
¢þ
>WENV182985864
OKZS01000199
[OKZS] human gut metagenome; human gut
656
583
-
Thr
CGT
[ENA]
¢þ
>WENV182985905
OKZS01001921
[OKZS] human gut metagenome; human gut
666
591
-
Thr
GGT
[ENA]
¢þ
>WENV182985950
OKZS01006555
[OKZS] human gut metagenome; human gut
724
649
-
Ala
TGC
[ENA]
¢þ
>WENV182985935
OKZS01003977
[OKZS] human gut metagenome; human gut
730
644
-
Leu
TAA
[ENA]
¢þ
>WENV182985946
OKZS01005685
[OKZS] human gut metagenome; human gut
748
670
-
His
GTG
[ENA]
¢þ
>WENV182985906
OKZS01002022
[OKZS] human gut metagenome; human gut
752
823
+
Gln
CTG
[ENA]
¢þ
>WENV182985938
OKZS01004132
[OKZS] human gut metagenome; human gut
798
724
-
Gly
TCC
[ENA]
¢þ
>WENV182985928
OKZS01003663
[OKZS] human gut metagenome; human gut
835
909
+
Pro
GGG
[ENA]
¢þ
>WENV182985942
OKZS01005037
[OKZS] human gut metagenome; human gut
973
1049
+
Arg
CCG
[ENA]
¢þ
>WENV182985895
OKZS01001537
[OKZS] human gut metagenome; human gut
1027
1100
+
Lys
TTT
[ENA]
¢þ
>WENV182985931
OKZS01003885
[OKZS] human gut metagenome; human gut
1102
1177
+
Asp
GTC
[ENA]
¢þ
>WENV182985866
OKZS01000231
[OKZS] human gut metagenome; human gut
1138
1067
-
Gln
CTG
[ENA]
¢þ
>WENV182985865
OKZS01000219
[OKZS] human gut metagenome; human gut
1205
1277
+
Cys
GCA
[ENA]
¢þ
>WENV182985873
OKZS01000524
[OKZS] human gut metagenome; human gut
1227
1300
+
Trp
CCA
[ENA]
¢þ
>WENV182985932
OKZS01003885
[OKZS] human gut metagenome; human gut
1237
1311
+
Val
TAC
[ENA]
¢þ
>WENV182985886
OKZS01000867
[OKZS] human gut metagenome; human gut
1275
1348
+
Thr
CGT
[ENA]
¢þ
>WENV182985933
OKZS01003885
[OKZS] human gut metagenome; human gut
1316
1398
+
Tyr
GTA
[ENA]
¢þ
>WENV182985915
OKZS01002546
[OKZS] human gut metagenome; human gut
1322
1249
-
Asp
GTC
[ENA]
¢þ
>WENV182985908
OKZS01002139
[OKZS] human gut metagenome; human gut
1328
1411
+
Tyr
GTA
[ENA]
¢þ
>WENV182985936
OKZS01004030
[OKZS] human gut metagenome; human gut
1337
1411
+
Thr
TGT
[ENA]
¢þ
>WENV182985919
OKZS01002812
[OKZS] human gut metagenome; human gut
1430
1504
+
fMet
CAT
[ENA]
¢þ
>WENV182985927
OKZS01003561
[OKZS] human gut metagenome; human gut
1434
1508
+
Asp
GTC
[ENA]
¢þ
>WENV182985909
OKZS01002139
[OKZS] human gut metagenome; human gut
1503
1575
+
Thr
GGT
[ENA]
¢þ
>WENV182985920
OKZS01002812
[OKZS] human gut metagenome; human gut
1536
1609
+
Phe
GAA
[ENA]
¢þ
>WENV182985921
OKZS01002812
[OKZS] human gut metagenome; human gut
1613
1683
+
Gly
TCC
[ENA]
¢þ
>WENV182985898
OKZS01001751
[OKZS] human gut metagenome; human gut
1665
1739
+
Glu
CTC
[ENA]
¢þ
>WENV182985881
OKZS01000752
[OKZS] human gut metagenome; human gut
1696
1772
+
Ile
GAT
[ENA]
¢þ
>WENV182985922
OKZS01002812
[OKZS] human gut metagenome; human gut
1704
1780
+
Arg
TCT
[ENA]
¢þ
>WENV182985917
OKZS01002773
[OKZS] human gut metagenome; human gut
1707
1782
+
Arg
TCT
[ENA]
¢þ
>WENV182985901
OKZS01001830
[OKZS] human gut metagenome; human gut
1716
1787
+
Gln
TTG
[ENA]
¢þ
>WENV182985891
OKZS01001239
[OKZS] human gut metagenome; human gut
1769
1695
-
Met
CAT
[ENA]
¢þ
>WENV182985899
OKZS01001751
[OKZS] human gut metagenome; human gut
1779
1855
+
Asn
GTT
[ENA]
¢þ
>WENV182985918
OKZS01002773
[OKZS] human gut metagenome; human gut
1790
1866
+
His
GTG
[ENA]
¢þ
>WENV182985882
OKZS01000752
[OKZS] human gut metagenome; human gut
1801
1875
+
Ala
TGC
[ENA]
¢þ
>WENV182985923
OKZS01002812
[OKZS] human gut metagenome; human gut
1811
1886
+
His
GTG
[ENA]
¢þ
>WENV182985859
OKZS01000080
[OKZS] human gut metagenome; human gut
1875
1793
-
Leu
TAG
[ENA]
¢þ
>WENV182985924
OKZS01002812
[OKZS] human gut metagenome; human gut
1890
1962
+
Gln
TTG
[ENA]
¢þ
>WENV182985879
OKZS01000729
[OKZS] human gut metagenome; human gut
1924
2000
+
Val
CAC
[ENA]
¢þ
>WENV182985889
OKZS01001100
[OKZS] human gut metagenome; human gut
1939
1868
-
Gln
CTG
[ENA]
¢þ
>WENV182985914
OKZS01002546
[OKZS] human gut metagenome; human gut
2003
1932
-
Cys
GCA
[ENA]
¢þ
>WENV182985896
OKZS01001611
[OKZS] human gut metagenome; human gut
2014
1935
-
Leu
CAA
[ENA]
¢þ
>WENV182985893
OKZS01001316
[OKZS] human gut metagenome; human gut
2142
2217
+
Phe
GAA
[ENA]
¢þ
>WENV182985913
OKZS01002546
[OKZS] human gut metagenome; human gut
2158
2086
-
Asn
GTT
[ENA]
¢þ
>WENV182985894
OKZS01001316
[OKZS] human gut metagenome; human gut
2248
2323
+
Gly
GCC
[ENA]
¢þ
>WENV182985878
OKZS01000720
[OKZS] human gut metagenome; human gut
2439
2366
-
fMet
CAT
[ENA]
¢þ
>WENV182985892
OKZS01001247
[OKZS] human gut metagenome; human gut
2467
2539
+
Arg
CCT
[ENA]
¢þ
>WENV182985897
OKZS01001672
[OKZS] human gut metagenome; human gut
2510
2436
-
Ala
GGC
[ENA]
¢þ
>WENV182985876
OKZS01000676
[OKZS] human gut metagenome; human gut
2632
2559
-
Lys
CTT
[ENA]
¢þ
>WENV182985902
OKZS01001841
[OKZS] human gut metagenome; human gut
2700
2775
+
Gly
CCC
[ENA]
¢þ
>WENV182985900
OKZS01001807
[OKZS] human gut metagenome; human gut
2741
2666
-
Pro
TGG
[ENA]
¢þ
>WENV182985857
OKZS01000073
[OKZS] human gut metagenome; human gut
2920
2994
+
His
GTG
[ENA]
¢þ
>WENV182985871
OKZS01000393
[OKZS] human gut metagenome; human gut
3303
3376
+
Lys
CTT
[ENA]
¢þ
>WENV182985863
OKZS01000198
[OKZS] human gut metagenome; human gut
3364
3291
-
fMet
CAT
[ENA]
¢þ
>WENV182985846
OKZS01000010
[OKZS] human gut metagenome; human gut
3426
3342
-
Leu
CAA
[ENA]
¢þ
>WENV182985890
OKZS01001204
[OKZS] human gut metagenome; human gut
3457
3531
+
Ile2
CAT
[ENA]
¢þ
>WENV182985885
OKZS01000855
[OKZS] human gut metagenome; human gut
3465
3372
-
Ser
GCT
[ENA]
¢þ
>WENV182985884
OKZS01000855
[OKZS] human gut metagenome; human gut
3585
3498
-
Ser
TGA
[ENA]
¢þ
>WENV182985872
OKZS01000510
[OKZS] human gut metagenome; human gut
3971
4059
+
Ser
GGA
[ENA]
¢þ
>WENV182985853
OKZS01000065
[OKZS] human gut metagenome; human gut
4211
4284
+
Phe
GAA
[ENA]
¢þ
>WENV182985852
OKZS01000059
[OKZS] human gut metagenome; human gut
4262
4334
+
Glu
TTC
[ENA]
¢þ
>WENV182985854
OKZS01000065
[OKZS] human gut metagenome; human gut
4296
4369
+
Pro
CGG
[ENA]
¢þ
>WENV182985862
OKZS01000165
[OKZS] human gut metagenome; human gut
4405
4331
-
Ala
GGC
[ENA]
¢þ
>WENV182985868
OKZS01000274
[OKZS] human gut metagenome; human gut
4690
4761
+
Gln
TTG
[ENA]
¢þ
>WENV182985877
OKZS01000718
[OKZS] human gut metagenome; human gut
4802
4890
+
Ser
CGA
[ENA]
¢þ
>WENV182985874
OKZS01000525
[OKZS] human gut metagenome; human gut
5661
5747
+
Leu
CAG
[ENA]
¢þ
>WENV182985867
OKZS01000268
[OKZS] human gut metagenome; human gut
6106
6031
-
Val
TAC
[ENA]
¢þ
>WENV182985870
OKZS01000374
[OKZS] human gut metagenome; human gut
6289
6216
-
Phe
GAA
[ENA]
¢þ
>WENV182985861
OKZS01000136
[OKZS] human gut metagenome; human gut
7913
7842
-
Gln
TTG
[ENA]
¢þ
>WENV182985849
OKZS01000042
[OKZS] human gut metagenome; human gut
8203
8279
+
Met
CAT
[ENA]
¢þ
>WENV182985847
OKZS01000029
[OKZS] human gut metagenome; human gut
9545
9471
-
Asn
GTT
[ENA]
¢þ
>WENV182985848
OKZS01000041
[OKZS] human gut metagenome; human gut
11809
11883
+
Ile2
CAT
[ENA]
¢þ
>WENV182985860
OKZS01000119
[OKZS] human gut metagenome; human gut
11829
11754
-
Pro
GGG
[ENA]
¢þ
>WENV182985858
OKZS01000074
[OKZS] human gut metagenome; human gut
12962
13047
+
Ser
TGA
[ENA]
¢þ
>WENV182985856
OKZS01000065
[OKZS] human gut metagenome; human gut
16080
15996
-
Leu
TAA
[ENA]
¢þ
>WENV182985855
OKZS01000065
[OKZS] human gut metagenome; human gut
16167
16094
-
Gly
GCC
[ENA]
¢þ
>WENV182985850
OKZS01000048
[OKZS] human gut metagenome; human gut
17599
17686
+
Ser
GCT
[ENA]
¢þ
>WENV182985851
OKZS01000048
[OKZS] human gut metagenome; human gut
17764
17836
+
Glu
CTC
[ENA]
¢þ
>WENV182985845
OKZS01000002
[OKZS] human gut metagenome; human gut
50612
50687
+
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK