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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKZX] human gut metagenome; human gut
HIT:
123 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182986744
OKZX01008971
[OKZX] human gut metagenome; human gut
2
77
+
Thr
GGT
[ENA]
¢þ
>WENV182986745
OKZX01009173
[OKZX] human gut metagenome; human gut
32
106
+
Lys
TTT
[ENA]
¢þ
>WENV182986668
OKZX01000698
[OKZX] human gut metagenome; human gut
75
3
-
Glu
TTC
[ENA]
¢þ
>WENV182986736
OKZX01007381
[OKZX] human gut metagenome; human gut
87
-1
-
Ser
CGA
[ENA]
¢þ
>WENV182986725
OKZX01005659
[OKZX] human gut metagenome; human gut
90
164
+
Ala
GGC
[ENA]
¢þ
>WENV182986741
OKZX01008076
[OKZX] human gut metagenome; human gut
92
20
-
Thr
CGT
[ENA]
¢þ
>WENV182986750
OKZX01010139
[OKZX] human gut metagenome; human gut
103
178
+
Pro
TGG
[ENA]
¢þ
>WENV182986728
OKZX01005846
[OKZX] human gut metagenome; human gut
120
208
+
Ser
GGA
[ENA]
¢þ
>WENV182986712
OKZX01003401
[OKZX] human gut metagenome; human gut
134
58
-
Asp
GTC
[ENA]
¢þ
>WENV182986683
OKZX01001663
[OKZX] human gut metagenome; human gut
145
220
+
Ile2
CAT
[ENA]
¢þ
>WENV182986686
OKZX01001820
[OKZX] human gut metagenome; human gut
156
81
-
Phe
GAA
[ENA]
¢þ
>WENV182986740
OKZX01008076
[OKZX] human gut metagenome; human gut
202
129
-
Glu
CTC
[ENA]
¢þ
>WENV182986746
OKZX01009173
[OKZX] human gut metagenome; human gut
202
284
+
Leu
TAG
[ENA]
¢þ
>WENV182986696
OKZX01002210
[OKZX] human gut metagenome; human gut
204
280
+
Arg
CCT
[ENA]
¢þ
>WENV182986751
OKZX01010139
[OKZX] human gut metagenome; human gut
213
283
+
Gly
TCC
[ENA]
¢þ
>WENV182986717
OKZX01004223
[OKZX] human gut metagenome; human gut
215
141
-
Ile2
CAT
[ENA]
¢þ
>WENV182986747
OKZX01009643
[OKZX] human gut metagenome; human gut
218
306
+
Ser
TGA
[ENA]
¢þ
>WENV182986730
OKZX01007018
[OKZX] human gut metagenome; human gut
219
294
+
Asp
GTC
[ENA]
¢þ
>WENV182986680
OKZX01001378
[OKZX] human gut metagenome; human gut
234
159
-
Val
GAC
[ENA]
¢þ
>WENV182986737
OKZX01007479
[OKZX] human gut metagenome; human gut
275
201
-
Ala
GGC
[ENA]
¢þ
>WENV182986739
OKZX01008076
[OKZX] human gut metagenome; human gut
285
211
-
Pro
CGG
[ENA]
¢þ
>WENV182986701
OKZX01002742
[OKZX] human gut metagenome; human gut
287
196
-
Ser
GGA
[ENA]
¢þ
>WENV182986752
OKZX01010139
[OKZX] human gut metagenome; human gut
304
379
+
Arg
TCT
[ENA]
¢þ
>WENV182986685
OKZX01001685
[OKZX] human gut metagenome; human gut
314
236
-
His
GTG
[ENA]
¢þ
>WENV182986754
OKZX01010549
[OKZX] human gut metagenome; human gut
314
388
+
Gly
TCC
[ENA]
¢þ
>WENV182986731
OKZX01007018
[OKZX] human gut metagenome; human gut
330
404
+
Val
TAC
[ENA]
¢þ
>WENV182986748
OKZX01009643
[OKZX] human gut metagenome; human gut
336
426
+
Ser
GGA
[ENA]
¢þ
>WENV182986729
OKZX01006930
[OKZX] human gut metagenome; human gut
363
290
-
Gly
CCC
[ENA]
¢þ
>WENV182986743
OKZX01008373
[OKZX] human gut metagenome; human gut
371
297
-
Ile
GAT
[ENA]
¢þ
>WENV182986749
OKZX01009785
[OKZX] human gut metagenome; human gut
378
285
-
Ser
GCT
[ENA]
¢þ
>WENV182986726
OKZX01005746
[OKZX] human gut metagenome; human gut
386
310
-
fMet
CAT
[ENA]
¢þ
>WENV182986711
OKZX01003401
[OKZX] human gut metagenome; human gut
386
311
-
Trp
CCA
[ENA]
¢þ
>WENV182986755
OKZX01010549
[OKZX] human gut metagenome; human gut
394
470
+
Arg
TCT
[ENA]
¢þ
>WENV182986716
OKZX01004091
[OKZX] human gut metagenome; human gut
401
315
-
Leu
TAA
[ENA]
¢þ
>WENV182986732
OKZX01007018
[OKZX] human gut metagenome; human gut
419
491
+
Thr
TGT
[ENA]
¢þ
>WENV182986753
OKZX01010139
[OKZX] human gut metagenome; human gut
420
494
+
His
GTG
[ENA]
¢þ
>WENV182986738
OKZX01007812
[OKZX] human gut metagenome; human gut
470
394
-
Pro
CGG
[ENA]
¢þ
>WENV182986727
OKZX01005757
[OKZX] human gut metagenome; human gut
470
553
+
Leu
GAG
[ENA]
¢þ
>WENV182986742
OKZX01008373
[OKZX] human gut metagenome; human gut
481
409
-
Ala
TGC
[ENA]
¢þ
>WENV182986733
OKZX01007018
[OKZX] human gut metagenome; human gut
512
587
+
fMet
CAT
[ENA]
¢þ
>WENV182986734
OKZX01007018
[OKZX] human gut metagenome; human gut
590
664
+
Phe
GAA
[ENA]
¢þ
>WENV182986695
OKZX01002209
[OKZX] human gut metagenome; human gut
607
682
+
Pro
TGG
[ENA]
¢þ
>WENV182986634
OKZX01000004
[OKZX] human gut metagenome; human gut
646
722
+
Met
CAT
[ENA]
¢þ
>WENV182986735
OKZX01007039
[OKZX] human gut metagenome; human gut
684
612
-
Glu
CTC
[ENA]
¢þ
>WENV182986705
OKZX01002972
[OKZX] human gut metagenome; human gut
693
776
+
Tyr
GTA
[ENA]
¢þ
>WENV182986724
OKZX01005500
[OKZX] human gut metagenome; human gut
707
780
+
Gln
TTG
[ENA]
¢þ
>WENV182986720
OKZX01005149
[OKZX] human gut metagenome; human gut
729
643
-
Leu
CAG
[ENA]
¢þ
>WENV182986684
OKZX01001675
[OKZX] human gut metagenome; human gut
755
827
+
Cys
GCA
[ENA]
¢þ
>WENV182986722
OKZX01005243
[OKZX] human gut metagenome; human gut
799
715
-
Tyr
GTA
[ENA]
¢þ
>WENV182986703
OKZX01002922
[OKZX] human gut metagenome; human gut
842
916
+
Thr
TGT
[ENA]
¢þ
>WENV182986721
OKZX01005243
[OKZX] human gut metagenome; human gut
884
810
-
Thr
TGT
[ENA]
¢þ
>WENV182986653
OKZX01000205
[OKZX] human gut metagenome; human gut
887
812
-
Pro
GGG
[ENA]
¢þ
>WENV182986706
OKZX01002972
[OKZX] human gut metagenome; human gut
890
962
+
Thr
GGT
[ENA]
¢þ
>WENV182986693
OKZX01002178
[OKZX] human gut metagenome; human gut
911
838
-
Asp
GTC
[ENA]
¢þ
>WENV182986682
OKZX01001577
[OKZX] human gut metagenome; human gut
927
1000
+
Trp
CCA
[ENA]
¢þ
>WENV182986723
OKZX01005446
[OKZX] human gut metagenome; human gut
952
1023
+
Cys
GCA
[ENA]
¢þ
>WENV182986714
OKZX01003756
[OKZX] human gut metagenome; human gut
959
1032
+
Lys
CTT
[ENA]
¢þ
>WENV182986647
OKZX01000104
[OKZX] human gut metagenome; human gut
1049
1131
+
Leu
TAG
[ENA]
¢þ
>WENV182986707
OKZX01003292
[OKZX] human gut metagenome; human gut
1074
999
-
Thr
CGT
[ENA]
¢þ
>WENV182986700
OKZX01002439
[OKZX] human gut metagenome; human gut
1083
1011
-
Pro
TGG
[ENA]
¢þ
>WENV182986719
OKZX01004886
[OKZX] human gut metagenome; human gut
1088
1160
+
Ala
GGC
[ENA]
¢þ
>WENV182986709
OKZX01003394
[OKZX] human gut metagenome; human gut
1135
1208
+
Asn
GTT
[ENA]
¢þ
>WENV182986718
OKZX01004575
[OKZX] human gut metagenome; human gut
1144
1217
+
Gly
CCC
[ENA]
¢þ
>WENV182986688
OKZX01001978
[OKZX] human gut metagenome; human gut
1166
1237
+
Gln
CTG
[ENA]
¢þ
>WENV182986715
OKZX01004087
[OKZX] human gut metagenome; human gut
1226
1314
+
Ser
GGA
[ENA]
¢þ
>WENV182986710
OKZX01003394
[OKZX] human gut metagenome; human gut
1234
1308
+
Glu
TTC
[ENA]
¢þ
>WENV182986681
OKZX01001546
[OKZX] human gut metagenome; human gut
1235
1309
+
Arg
TCT
[ENA]
¢þ
>WENV182986678
OKZX01001146
[OKZX] human gut metagenome; human gut
1294
1367
+
Lys
CTT
[ENA]
¢þ
>WENV182986649
OKZX01000127
[OKZX] human gut metagenome; human gut
1299
1225
-
Ile2
CAT
[ENA]
¢þ
>WENV182986689
OKZX01002033
[OKZX] human gut metagenome; human gut
1301
1386
+
Ser
TGA
[ENA]
¢þ
>WENV182986713
OKZX01003710
[OKZX] human gut metagenome; human gut
1341
1424
+
Leu
TAA
[ENA]
¢þ
>WENV182986702
OKZX01002905
[OKZX] human gut metagenome; human gut
1413
1488
+
Val
TAC
[ENA]
¢þ
>WENV182986704
OKZX01002950
[OKZX] human gut metagenome; human gut
1425
1351
-
Ile
GAT
[ENA]
¢þ
>WENV182986677
OKZX01001102
[OKZX] human gut metagenome; human gut
1436
1509
+
Lys
TTT
[ENA]
¢þ
>WENV182986674
OKZX01000888
[OKZX] human gut metagenome; human gut
1457
1372
-
Ser
TGA
[ENA]
¢þ
>WENV182986687
OKZX01001883
[OKZX] human gut metagenome; human gut
1525
1450
-
Gly
CCC
[ENA]
¢þ
>WENV182986698
OKZX01002254
[OKZX] human gut metagenome; human gut
1567
1654
+
Ser
TGA
[ENA]
¢þ
>WENV182986692
OKZX01002178
[OKZX] human gut metagenome; human gut
1592
1521
-
Cys
GCA
[ENA]
¢þ
>WENV182986708
OKZX01003301
[OKZX] human gut metagenome; human gut
1615
1541
-
Gly
TCC
[ENA]
¢þ
>WENV182986671
OKZX01000804
[OKZX] human gut metagenome; human gut
1646
1571
-
Gly
GCC
[ENA]
¢þ
>WENV182986662
OKZX01000406
[OKZX] human gut metagenome; human gut
1669
1596
-
Gly
CCC
[ENA]
¢þ
>WENV182986699
OKZX01002254
[OKZX] human gut metagenome; human gut
1687
1780
+
Ser
GCT
[ENA]
¢þ
>WENV182986675
OKZX01000996
[OKZX] human gut metagenome; human gut
1696
1772
+
Ile
GAT
[ENA]
¢þ
>WENV182986691
OKZX01002178
[OKZX] human gut metagenome; human gut
1747
1675
-
Asn
GTT
[ENA]
¢þ
>WENV182986676
OKZX01000996
[OKZX] human gut metagenome; human gut
1801
1875
+
Ala
TGC
[ENA]
¢þ
>WENV182986694
OKZX01002189
[OKZX] human gut metagenome; human gut
1837
1919
+
Leu
TAG
[ENA]
¢þ
>WENV182986669
OKZX01000726
[OKZX] human gut metagenome; human gut
1978
1899
-
Leu
CAA
[ENA]
¢þ
>WENV182986690
OKZX01002178
[OKZX] human gut metagenome; human gut
2032
1960
-
Glu
TTC
[ENA]
¢þ
>WENV182986697
OKZX01002238
[OKZX] human gut metagenome; human gut
2059
1983
-
Arg
CCG
[ENA]
¢þ
>WENV182986646
OKZX01000092
[OKZX] human gut metagenome; human gut
2635
2709
+
His
GTG
[ENA]
¢þ
>WENV182986656
OKZX01000235
[OKZX] human gut metagenome; human gut
2926
3000
+
Ala
GGC
[ENA]
¢þ
>WENV182986670
OKZX01000761
[OKZX] human gut metagenome; human gut
2979
3055
+
Arg
ACG
[ENA]
¢þ
>WENV182986679
OKZX01001227
[OKZX] human gut metagenome; human gut
3332
3403
+
Gln
TTG
[ENA]
¢þ
>WENV182986666
OKZX01000552
[OKZX] human gut metagenome; human gut
3359
3433
+
Arg
TCT
[ENA]
¢þ
>WENV182986663
OKZX01000460
[OKZX] human gut metagenome; human gut
3469
3545
+
Val
CAC
[ENA]
¢þ
>WENV182986672
OKZX01000823
[OKZX] human gut metagenome; human gut
3735
3811
+
Met
CAT
[ENA]
¢þ
>WENV182986673
OKZX01000823
[OKZX] human gut metagenome; human gut
3903
3974
+
Glu
TTC
[ENA]
¢þ
>WENV182986659
OKZX01000319
[OKZX] human gut metagenome; human gut
4083
4157
+
Met
CAT
[ENA]
¢þ
>WENV182986658
OKZX01000313
[OKZX] human gut metagenome; human gut
4195
4121
-
Pro
GGG
[ENA]
¢þ
>WENV182986667
OKZX01000584
[OKZX] human gut metagenome; human gut
4772
4845
+
fMet
CAT
[ENA]
¢þ
>WENV182986665
OKZX01000512
[OKZX] human gut metagenome; human gut
4967
4893
-
Asp
GTC
[ENA]
¢þ
>WENV182986664
OKZX01000512
[OKZX] human gut metagenome; human gut
5097
5023
-
Asp
GTC
[ENA]
¢þ
>WENV182986652
OKZX01000189
[OKZX] human gut metagenome; human gut
5202
5129
-
Thr
CGT
[ENA]
¢þ
>WENV182986648
OKZX01000117
[OKZX] human gut metagenome; human gut
5380
5296
-
Leu
CAA
[ENA]
¢þ
>WENV182986639
OKZX01000025
[OKZX] human gut metagenome; human gut
5406
5322
-
Leu
TAA
[ENA]
¢þ
>WENV182986638
OKZX01000025
[OKZX] human gut metagenome; human gut
5493
5420
-
Gly
GCC
[ENA]
¢þ
>WENV182986633
OKZX01000002
[OKZX] human gut metagenome; human gut
5508
5580
+
Arg
CCT
[ENA]
¢þ
>WENV182986661
OKZX01000361
[OKZX] human gut metagenome; human gut
6370
6297
-
Pro
CGG
[ENA]
¢þ
>WENV182986660
OKZX01000361
[OKZX] human gut metagenome; human gut
6455
6382
-
Phe
GAA
[ENA]
¢þ
>WENV182986640
OKZX01000039
[OKZX] human gut metagenome; human gut
6585
6510
-
Val
TAC
[ENA]
¢þ
>WENV182986655
OKZX01000229
[OKZX] human gut metagenome; human gut
6652
6726
+
Thr
TGT
[ENA]
¢þ
>WENV182986657
OKZX01000272
[OKZX] human gut metagenome; human gut
6907
6978
+
Gln
TTG
[ENA]
¢þ
>WENV182986635
OKZX01000007
[OKZX] human gut metagenome; human gut
7569
7496
-
Lys
TTT
[ENA]
¢þ
>WENV182986642
OKZX01000067
[OKZX] human gut metagenome; human gut
7793
7721
-
Glu
CTC
[ENA]
¢þ
>WENV182986641
OKZX01000067
[OKZX] human gut metagenome; human gut
7946
7859
-
Ser
GCT
[ENA]
¢þ
>WENV182986654
OKZX01000213
[OKZX] human gut metagenome; human gut
8364
8436
+
Arg
CCT
[ENA]
¢þ
>WENV182986637
OKZX01000015
[OKZX] human gut metagenome; human gut
8577
8504
-
fMet
CAT
[ENA]
¢þ
>WENV182986636
OKZX01000012
[OKZX] human gut metagenome; human gut
8718
8644
-
Ile2
CAT
[ENA]
¢þ
>WENV182986651
OKZX01000173
[OKZX] human gut metagenome; human gut
9347
9271
-
Asn
GTT
[ENA]
¢þ
>WENV182986650
OKZX01000173
[OKZX] human gut metagenome; human gut
9461
9387
-
Glu
CTC
[ENA]
¢þ
>WENV182986645
OKZX01000077
[OKZX] human gut metagenome; human gut
9835
9920
+
Ser
TGA
[ENA]
¢þ
>WENV182986643
OKZX01000071
[OKZX] human gut metagenome; human gut
10299
10228
-
Gln
CTG
[ENA]
¢þ
>WENV182986644
OKZX01000073
[OKZX] human gut metagenome; human gut
12708
12623
-
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK