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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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HOW TO USE
tRNA gene List
[OLBD] human gut metagenome; human gut
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182994527
OLBD01001057
[OLBD] human gut metagenome; human gut
2
87
+
Tyr
GTA
[ENA]
¢þ
>WENV182994590
OLBD01008198
[OLBD] human gut metagenome; human gut
9
83
+
Gly
TCC
[ENA]
¢þ
>WENV182994578
OLBD01006519
[OLBD] human gut metagenome; human gut
40
135
+
SeC
TCA
[ENA]
¢þ
>WENV182994591
OLBD01008685
[OLBD] human gut metagenome; human gut
47
122
+
Trp
CCA
[ENA]
¢þ
>WENV182994575
OLBD01005166
[OLBD] human gut metagenome; human gut
72
159
+
Leu
TAA
[ENA]
¢þ
>WENV182994589
OLBD01008193
[OLBD] human gut metagenome; human gut
75
1
-
Arg
CCT
[ENA]
¢þ
>WENV182994481
OLBD01000063
[OLBD] human gut metagenome; human gut
80
154
+
Asn
GTT
[ENA]
¢þ
>WENV182994524
OLBD01000787
[OLBD] human gut metagenome; human gut
83
9
-
Arg
CCT
[ENA]
¢þ
>WENV182994492
OLBD01000129
[OLBD] human gut metagenome; human gut
87
11
-
Arg
ACG
[ENA]
¢þ
>WENV182994562
OLBD01003462
[OLBD] human gut metagenome; human gut
118
194
+
Arg
ACG
[ENA]
¢þ
>WENV182994587
OLBD01007821
[OLBD] human gut metagenome; human gut
122
47
-
fMet
CAT
[ENA]
¢þ
>WENV182994551
OLBD01002762
[OLBD] human gut metagenome; human gut
133
57
-
Val
CAC
[ENA]
¢þ
>WENV182994579
OLBD01006729
[OLBD] human gut metagenome; human gut
141
65
-
Trp
CCA
[ENA]
¢þ
>WENV182994464
OLBD01000026
[OLBD] human gut metagenome; human gut
165
89
-
Val
TAC
[ENA]
¢þ
>WENV182994559
OLBD01003077
[OLBD] human gut metagenome; human gut
167
96
-
Gln
TTG
[ENA]
¢þ
>WENV182994588
OLBD01008116
[OLBD] human gut metagenome; human gut
169
256
+
Ser
GGA
[ENA]
¢þ
>WENV182994572
OLBD01005047
[OLBD] human gut metagenome; human gut
182
255
+
Asn
GTT
[ENA]
¢þ
>WENV182994536
OLBD01001512
[OLBD] human gut metagenome; human gut
189
98
-
Ser
GGA
[ENA]
¢þ
>WENV182994473
OLBD01000042
[OLBD] human gut metagenome; human gut
206
131
-
Pro
GGG
[ENA]
¢þ
>WENV182994570
OLBD01004660
[OLBD] human gut metagenome; human gut
222
135
-
Ser
GCT
[ENA]
¢þ
>WENV182994586
OLBD01007821
[OLBD] human gut metagenome; human gut
223
149
-
Thr
TGT
[ENA]
¢þ
>WENV182994520
OLBD01000659
[OLBD] human gut metagenome; human gut
240
167
-
fMet
CAT
[ENA]
¢þ
>WENV182994533
OLBD01001222
[OLBD] human gut metagenome; human gut
255
181
-
His
GTG
[ENA]
¢þ
>WENV182994566
OLBD01004222
[OLBD] human gut metagenome; human gut
286
200
-
Leu
GAG
[ENA]
¢þ
>WENV182994576
OLBD01005352
[OLBD] human gut metagenome; human gut
295
219
-
fMet
CAT
[ENA]
¢þ
>WENV182994558
OLBD01003077
[OLBD] human gut metagenome; human gut
295
220
-
His
GTG
[ENA]
¢þ
>WENV182994581
OLBD01007091
[OLBD] human gut metagenome; human gut
307
379
+
Trp
CCA
[ENA]
¢þ
>WENV182994505
OLBD01000247
[OLBD] human gut metagenome; human gut
314
240
-
Thr
TGT
[ENA]
¢þ
>WENV182994585
OLBD01007821
[OLBD] human gut metagenome; human gut
323
240
-
Tyr
GTA
[ENA]
¢þ
>WENV182994493
OLBD01000131
[OLBD] human gut metagenome; human gut
336
410
+
Glu
CTC
[ENA]
¢þ
>WENV182994532
OLBD01001222
[OLBD] human gut metagenome; human gut
339
264
-
Arg
TCT
[ENA]
¢þ
>WENV182994557
OLBD01003077
[OLBD] human gut metagenome; human gut
376
301
-
Arg
TCT
[ENA]
¢þ
>WENV182994584
OLBD01007821
[OLBD] human gut metagenome; human gut
403
330
-
Val
TAC
[ENA]
¢þ
>WENV182994549
OLBD01002269
[OLBD] human gut metagenome; human gut
427
503
+
Pro
GGG
[ENA]
¢þ
>WENV182994580
OLBD01006827
[OLBD] human gut metagenome; human gut
433
506
+
Ala
CGC
[ENA]
¢þ
>WENV182994548
OLBD01002189
[OLBD] human gut metagenome; human gut
446
370
-
fMet
CAT
[ENA]
¢þ
>WENV182994573
OLBD01005047
[OLBD] human gut metagenome; human gut
448
521
+
Glu
TTC
[ENA]
¢þ
>WENV182994569
OLBD01004581
[OLBD] human gut metagenome; human gut
458
375
-
Leu
GAG
[ENA]
¢þ
>WENV182994556
OLBD01003077
[OLBD] human gut metagenome; human gut
483
413
-
Gly
TCC
[ENA]
¢þ
>WENV182994583
OLBD01007821
[OLBD] human gut metagenome; human gut
484
409
-
Asp
GTC
[ENA]
¢þ
>WENV182994568
OLBD01004551
[OLBD] human gut metagenome; human gut
531
440
-
Ser
CGA
[ENA]
¢þ
>WENV182994574
OLBD01005047
[OLBD] human gut metagenome; human gut
563
635
+
Cys
GCA
[ENA]
¢þ
>WENV182994582
OLBD01007098
[OLBD] human gut metagenome; human gut
579
505
-
Gln
CTG
[ENA]
¢þ
>WENV182994546
OLBD01001901
[OLBD] human gut metagenome; human gut
585
511
-
Cys
GCA
[ENA]
¢þ
>WENV182994550
OLBD01002470
[OLBD] human gut metagenome; human gut
588
663
+
Arg
CCT
[ENA]
¢þ
>WENV182994552
OLBD01002783
[OLBD] human gut metagenome; human gut
613
540
-
Gly
CCC
[ENA]
¢þ
>WENV182994564
OLBD01003687
[OLBD] human gut metagenome; human gut
629
557
-
Gln
CTG
[ENA]
¢þ
>WENV182994553
OLBD01002919
[OLBD] human gut metagenome; human gut
631
706
+
Thr
CGT
[ENA]
¢þ
>WENV182994571
OLBD01004890
[OLBD] human gut metagenome; human gut
668
760
+
Ser
GCT
[ENA]
¢þ
>WENV182994545
OLBD01001901
[OLBD] human gut metagenome; human gut
690
615
-
Gly
GCC
[ENA]
¢þ
>WENV182994577
OLBD01005559
[OLBD] human gut metagenome; human gut
709
629
-
Leu
TAG
[ENA]
¢þ
>WENV182994565
OLBD01004162
[OLBD] human gut metagenome; human gut
747
822
+
Thr
CGT
[ENA]
¢þ
>WENV182994567
OLBD01004494
[OLBD] human gut metagenome; human gut
769
844
+
Thr
TGT
[ENA]
¢þ
>WENV182994544
OLBD01001901
[OLBD] human gut metagenome; human gut
806
731
-
Phe
GAA
[ENA]
¢þ
>WENV182994561
OLBD01003321
[OLBD] human gut metagenome; human gut
817
741
-
Ile
GAT
[ENA]
¢þ
>WENV182994560
OLBD01003321
[OLBD] human gut metagenome; human gut
896
821
-
Ala
TGC
[ENA]
¢þ
>WENV182994554
OLBD01003000
[OLBD] human gut metagenome; human gut
903
828
-
Ile2
CAT
[ENA]
¢þ
>WENV182994506
OLBD01000252
[OLBD] human gut metagenome; human gut
903
979
+
Arg
CCG
[ENA]
¢þ
>WENV182994531
OLBD01001206
[OLBD] human gut metagenome; human gut
905
827
-
Arg
CCT
[ENA]
¢þ
>WENV182994563
OLBD01003498
[OLBD] human gut metagenome; human gut
910
834
-
Asp
GTC
[ENA]
¢þ
>WENV182994547
OLBD01002083
[OLBD] human gut metagenome; human gut
956
880
-
Arg
TCT
[ENA]
¢þ
>WENV182994540
OLBD01001743
[OLBD] human gut metagenome; human gut
1019
1094
+
Val
TAC
[ENA]
¢þ
>WENV182994507
OLBD01000252
[OLBD] human gut metagenome; human gut
1038
1113
+
His
GTG
[ENA]
¢þ
>WENV182994555
OLBD01003032
[OLBD] human gut metagenome; human gut
1044
1119
+
Asn
GTT
[ENA]
¢þ
>WENV182994537
OLBD01001629
[OLBD] human gut metagenome; human gut
1078
1162
+
Tyr
GTA
[ENA]
¢þ
>WENV182994541
OLBD01001743
[OLBD] human gut metagenome; human gut
1098
1173
+
Lys
TTT
[ENA]
¢þ
>WENV182994508
OLBD01000252
[OLBD] human gut metagenome; human gut
1134
1220
+
Leu
CAG
[ENA]
¢þ
>WENV182994535
OLBD01001244
[OLBD] human gut metagenome; human gut
1139
1212
+
Ile2
CAT
[ENA]
¢þ
>WENV182994521
OLBD01000665
[OLBD] human gut metagenome; human gut
1216
1289
+
Gln
CTG
[ENA]
¢þ
>WENV182994509
OLBD01000252
[OLBD] human gut metagenome; human gut
1263
1339
+
Pro
TGG
[ENA]
¢þ
>WENV182994542
OLBD01001758
[OLBD] human gut metagenome; human gut
1271
1356
+
Leu
CAG
[ENA]
¢þ
>WENV182994538
OLBD01001629
[OLBD] human gut metagenome; human gut
1279
1353
+
Gly
TCC
[ENA]
¢þ
>WENV182994526
OLBD01001033
[OLBD] human gut metagenome; human gut
1284
1357
+
Gly
GCC
[ENA]
¢þ
>WENV182994543
OLBD01001869
[OLBD] human gut metagenome; human gut
1314
1398
+
Leu
CAA
[ENA]
¢þ
>WENV182994522
OLBD01000665
[OLBD] human gut metagenome; human gut
1323
1398
+
Pro
CGG
[ENA]
¢þ
>WENV182994515
OLBD01000452
[OLBD] human gut metagenome; human gut
1349
1275
-
Gly
TCC
[ENA]
¢þ
>WENV182994539
OLBD01001629
[OLBD] human gut metagenome; human gut
1360
1435
+
Thr
GGT
[ENA]
¢þ
>WENV182994485
OLBD01000081
[OLBD] human gut metagenome; human gut
1451
1378
-
Gly
CCC
[ENA]
¢þ
>WENV182994510
OLBD01000349
[OLBD] human gut metagenome; human gut
1523
1597
+
Ile
GAT
[ENA]
¢þ
>WENV182994516
OLBD01000492
[OLBD] human gut metagenome; human gut
1573
1660
+
Ser
TGA
[ENA]
¢þ
>WENV182994511
OLBD01000349
[OLBD] human gut metagenome; human gut
1614
1688
+
Ala
TGC
[ENA]
¢þ
>WENV182994497
OLBD01000184
[OLBD] human gut metagenome; human gut
1635
1710
+
Thr
GGT
[ENA]
¢þ
>WENV182994530
OLBD01001179
[OLBD] human gut metagenome; human gut
1682
1757
+
Gly
CCC
[ENA]
¢þ
>WENV182994534
OLBD01001223
[OLBD] human gut metagenome; human gut
1684
1600
-
Leu
CAA
[ENA]
¢þ
>WENV182994517
OLBD01000492
[OLBD] human gut metagenome; human gut
1694
1787
+
Ser
GCT
[ENA]
¢þ
>WENV182994512
OLBD01000366
[OLBD] human gut metagenome; human gut
1831
1906
+
Ala
GGC
[ENA]
¢þ
>WENV182994528
OLBD01001072
[OLBD] human gut metagenome; human gut
1862
1951
+
Ser
GCT
[ENA]
¢þ
>WENV182994523
OLBD01000742
[OLBD] human gut metagenome; human gut
1956
1873
-
Leu
TAA
[ENA]
¢þ
>WENV182994529
OLBD01001095
[OLBD] human gut metagenome; human gut
2071
1996
-
Lys
CTT
[ENA]
¢þ
>WENV182994525
OLBD01000948
[OLBD] human gut metagenome; human gut
2268
2194
-
Glu
CTC
[ENA]
¢þ
>WENV182994503
OLBD01000223
[OLBD] human gut metagenome; human gut
2316
2240
-
Asn
GTT
[ENA]
¢þ
>WENV182994496
OLBD01000173
[OLBD] human gut metagenome; human gut
2582
2506
-
Arg
CCG
[ENA]
¢þ
>WENV182994518
OLBD01000617
[OLBD] human gut metagenome; human gut
2679
2606
-
Lys
CTT
[ENA]
¢þ
>WENV182994519
OLBD01000622
[OLBD] human gut metagenome; human gut
2786
2867
+
Leu
TAG
[ENA]
¢þ
>WENV182994513
OLBD01000370
[OLBD] human gut metagenome; human gut
2814
2739
-
Phe
GAA
[ENA]
¢þ
>WENV182994500
OLBD01000184
[OLBD] human gut metagenome; human gut
3456
3381
-
Thr
GGT
[ENA]
¢þ
>WENV182994499
OLBD01000184
[OLBD] human gut metagenome; human gut
3536
3460
-
Asp
GTC
[ENA]
¢þ
>WENV182994514
OLBD01000426
[OLBD] human gut metagenome; human gut
3860
3789
-
Gln
TTG
[ENA]
¢þ
>WENV182994498
OLBD01000184
[OLBD] human gut metagenome; human gut
3896
3821
-
Trp
CCA
[ENA]
¢þ
>WENV182994501
OLBD01000194
[OLBD] human gut metagenome; human gut
4294
4370
+
Met
CAT
[ENA]
¢þ
>WENV182994502
OLBD01000194
[OLBD] human gut metagenome; human gut
4462
4536
+
Glu
TTC
[ENA]
¢þ
>WENV182994504
OLBD01000236
[OLBD] human gut metagenome; human gut
4569
4644
+
Val
GAC
[ENA]
¢þ
>WENV182994488
OLBD01000100
[OLBD] human gut metagenome; human gut
4615
4700
+
Ser
TGA
[ENA]
¢þ
>WENV182994491
OLBD01000128
[OLBD] human gut metagenome; human gut
8132
8053
-
Leu
CAA
[ENA]
¢þ
>WENV182994494
OLBD01000139
[OLBD] human gut metagenome; human gut
8481
8409
-
Glu
TTC
[ENA]
¢þ
>WENV182994495
OLBD01000150
[OLBD] human gut metagenome; human gut
8942
8866
-
Val
TAC
[ENA]
¢þ
>WENV182994482
OLBD01000074
[OLBD] human gut metagenome; human gut
9895
9970
+
Phe
GAA
[ENA]
¢þ
>WENV182994490
OLBD01000126
[OLBD] human gut metagenome; human gut
9900
9824
-
Asn
GTT
[ENA]
¢þ
>WENV182994489
OLBD01000126
[OLBD] human gut metagenome; human gut
10016
9942
-
Glu
CTC
[ENA]
¢þ
>WENV182994486
OLBD01000084
[OLBD] human gut metagenome; human gut
10062
9987
-
His
GTG
[ENA]
¢þ
>WENV182994480
OLBD01000060
[OLBD] human gut metagenome; human gut
11327
11254
-
Trp
CCA
[ENA]
¢þ
>WENV182994475
OLBD01000058
[OLBD] human gut metagenome; human gut
12331
12243
-
Ser
GGA
[ENA]
¢þ
>WENV182994479
OLBD01000060
[OLBD] human gut metagenome; human gut
12692
12620
-
Thr
GGT
[ENA]
¢þ
>WENV182994474
OLBD01000052
[OLBD] human gut metagenome; human gut
12710
12620
-
Ser
CGA
[ENA]
¢þ
>WENV182994478
OLBD01000060
[OLBD] human gut metagenome; human gut
12893
12810
-
Tyr
GTA
[ENA]
¢þ
>WENV182994477
OLBD01000060
[OLBD] human gut metagenome; human gut
13010
12936
-
Thr
TGT
[ENA]
¢þ
>WENV182994459
OLBD01000018
[OLBD] human gut metagenome; human gut
13258
13176
-
Leu
TAG
[ENA]
¢þ
>WENV182994487
OLBD01000095
[OLBD] human gut metagenome; human gut
14989
15063
+
Asp
GTC
[ENA]
¢þ
>WENV182994484
OLBD01000078
[OLBD] human gut metagenome; human gut
16585
16660
+
Pro
TGG
[ENA]
¢þ
>WENV182994463
OLBD01000025
[OLBD] human gut metagenome; human gut
18622
18696
+
Glu
TTC
[ENA]
¢þ
>WENV182994458
OLBD01000016
[OLBD] human gut metagenome; human gut
21204
21278
+
Ile2
CAT
[ENA]
¢þ
>WENV182994483
OLBD01000076
[OLBD] human gut metagenome; human gut
21219
21293
+
Arg
TCT
[ENA]
¢þ
>WENV182994450
OLBD01000004
[OLBD] human gut metagenome; human gut
24370
24444
+
Met
CAT
[ENA]
¢þ
>WENV182994451
OLBD01000004
[OLBD] human gut metagenome; human gut
24506
24580
+
Met
CAT
[ENA]
¢þ
>WENV182994457
OLBD01000014
[OLBD] human gut metagenome; human gut
24628
24554
-
Ala
GGC
[ENA]
¢þ
>WENV182994476
OLBD01000060
[OLBD] human gut metagenome; human gut
26117
26191
+
Asn
GTT
[ENA]
¢þ
>WENV182994453
OLBD01000008
[OLBD] human gut metagenome; human gut
26770
26699
-
Gln
TTG
[ENA]
¢þ
>WENV182994472
OLBD01000042
[OLBD] human gut metagenome; human gut
35031
35102
+
Gln
CTG
[ENA]
¢þ
>WENV182994470
OLBD01000032
[OLBD] human gut metagenome; human gut
36998
36915
-
Tyr
GTA
[ENA]
¢þ
>WENV182994456
OLBD01000012
[OLBD] human gut metagenome; human gut
38679
38751
+
Arg
CCT
[ENA]
¢þ
>WENV182994465
OLBD01000027
[OLBD] human gut metagenome; human gut
41126
41199
+
Lys
CTT
[ENA]
¢þ
>WENV182994466
OLBD01000027
[OLBD] human gut metagenome; human gut
41223
41296
+
Lys
CTT
[ENA]
¢þ
>WENV182994467
OLBD01000027
[OLBD] human gut metagenome; human gut
41316
41389
+
Lys
CTT
[ENA]
¢þ
>WENV182994468
OLBD01000029
[OLBD] human gut metagenome; human gut
42179
42254
+
Lys
TTT
[ENA]
¢þ
>WENV182994471
OLBD01000040
[OLBD] human gut metagenome; human gut
45442
45516
+
Cys
GCA
[ENA]
¢þ
>WENV182994469
OLBD01000032
[OLBD] human gut metagenome; human gut
51654
51728
+
Thr
TGT
[ENA]
¢þ
>WENV182994462
OLBD01000020
[OLBD] human gut metagenome; human gut
62207
62134
-
Trp
CCA
[ENA]
¢þ
>WENV182994460
OLBD01000019
[OLBD] human gut metagenome; human gut
74936
74848
-
Ser
GGA
[ENA]
¢þ
>WENV182994461
OLBD01000020
[OLBD] human gut metagenome; human gut
75829
75914
+
Ser
TGA
[ENA]
¢þ
>WENV182994455
OLBD01000011
[OLBD] human gut metagenome; human gut
100591
100516
-
Phe
GAA
[ENA]
¢þ
>WENV182994454
OLBD01000011
[OLBD] human gut metagenome; human gut
100772
100845
+
Pro
CGG
[ENA]
¢þ
>WENV182994452
OLBD01000005
[OLBD] human gut metagenome; human gut
135427
135354
-
Thr
CGT
[ENA]
¢þ
>WENV182994449
OLBD01000003
[OLBD] human gut metagenome; human gut
158558
158486
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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