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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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HOW TO USE
tRNA gene List
[OLBT] human gut metagenome; human gut
HIT:
155 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182998343
OLBT01000719
[OLBT] human gut metagenome; human gut
8
82
+
Ala
TGC
[ENA]
¢þ
>WENV182998431
OLBT01010834
[OLBT] human gut metagenome; human gut
17
90
+
Gln
CTG
[ENA]
¢þ
>WENV182998345
OLBT01000846
[OLBT] human gut metagenome; human gut
20
95
+
Ala
TGC
[ENA]
¢þ
>WENV182998421
OLBT01007280
[OLBT] human gut metagenome; human gut
22
107
+
Leu
CAG
[ENA]
¢þ
>WENV182998396
OLBT01002709
[OLBT] human gut metagenome; human gut
49
125
+
Ile
GAT
[ENA]
¢þ
>WENV182998402
OLBT01003162
[OLBT] human gut metagenome; human gut
60
146
+
Leu
CAG
[ENA]
¢þ
>WENV182998433
OLBT01011390
[OLBT] human gut metagenome; human gut
75
151
+
Pro
GGG
[ENA]
¢þ
>WENV182998406
OLBT01003425
[OLBT] human gut metagenome; human gut
87
162
+
Val
TAC
[ENA]
¢þ
>WENV182998369
OLBT01001752
[OLBT] human gut metagenome; human gut
87
162
+
Gly
GCC
[ENA]
¢þ
>WENV182998415
OLBT01005920
[OLBT] human gut metagenome; human gut
88
12
-
Met
CAT
[ENA]
¢þ
>WENV182998321
OLBT01000222
[OLBT] human gut metagenome; human gut
88
176
+
Ser
GCT
[ENA]
¢þ
>WENV182998304
OLBT01000057
[OLBT] human gut metagenome; human gut
94
21
-
fMet
CAT
[ENA]
¢þ
>WENV182998355
OLBT01001107
[OLBT] human gut metagenome; human gut
130
56
-
Ala
GGC
[ENA]
¢þ
>WENV182998409
OLBT01004041
[OLBT] human gut metagenome; human gut
133
58
-
Gln
TTG
[ENA]
¢þ
>WENV182998420
OLBT01007031
[OLBT] human gut metagenome; human gut
139
233
+
SeC
TCA
[ENA]
¢þ
>WENV182998427
OLBT01009660
[OLBT] human gut metagenome; human gut
143
67
-
Arg
TCT
[ENA]
¢þ
>WENV182998434
OLBT01011839
[OLBT] human gut metagenome; human gut
143
67
-
fMet
CAT
[ENA]
¢þ
>WENV182998341
OLBT01000700
[OLBT] human gut metagenome; human gut
148
74
-
Asn
GTT
[ENA]
¢þ
>WENV182998397
OLBT01002709
[OLBT] human gut metagenome; human gut
149
224
+
Ala
TGC
[ENA]
¢þ
>WENV182998374
OLBT01001772
[OLBT] human gut metagenome; human gut
150
79
-
Gln
TTG
[ENA]
¢þ
>WENV182998432
OLBT01011121
[OLBT] human gut metagenome; human gut
165
89
-
Val
GAC
[ENA]
¢þ
>WENV182998376
OLBT01001871
[OLBT] human gut metagenome; human gut
168
96
-
Glu
CTC
[ENA]
¢þ
>WENV182998389
OLBT01002342
[OLBT] human gut metagenome; human gut
177
101
-
Pro
GGG
[ENA]
¢þ
>WENV182998439
OLBT01012084
[OLBT] human gut metagenome; human gut
180
99
-
Tyr
GTA
[ENA]
¢þ
>WENV182998410
OLBT01004119
[OLBT] human gut metagenome; human gut
183
258
+
Ala
GGC
[ENA]
¢þ
>WENV182998306
OLBT01000064
[OLBT] human gut metagenome; human gut
205
132
-
Thr
CGT
[ENA]
¢þ
>WENV182998360
OLBT01001499
[OLBT] human gut metagenome; human gut
218
293
+
Lys
TTT
[ENA]
¢þ
>WENV182998411
OLBT01004139
[OLBT] human gut metagenome; human gut
221
294
+
Gly
GCC
[ENA]
¢þ
>WENV182998408
OLBT01004041
[OLBT] human gut metagenome; human gut
225
150
-
His
GTG
[ENA]
¢þ
>WENV182998418
OLBT01006751
[OLBT] human gut metagenome; human gut
230
305
+
Thr
TGT
[ENA]
¢þ
>WENV182998325
OLBT01000247
[OLBT] human gut metagenome; human gut
235
147
-
Ser
GGA
[ENA]
¢þ
>WENV182998302
OLBT01000049
[OLBT] human gut metagenome; human gut
249
176
-
Pro
CGG
[ENA]
¢þ
>WENV182998438
OLBT01012084
[OLBT] human gut metagenome; human gut
267
194
-
Val
TAC
[ENA]
¢þ
>WENV182998352
OLBT01001055
[OLBT] human gut metagenome; human gut
274
189
-
Leu
GAG
[ENA]
¢þ
>WENV182998373
OLBT01001772
[OLBT] human gut metagenome; human gut
277
203
-
His
GTG
[ENA]
¢þ
>WENV182998336
OLBT01000480
[OLBT] human gut metagenome; human gut
284
198
-
Leu
TAA
[ENA]
¢þ
>WENV182998401
OLBT01002984
[OLBT] human gut metagenome; human gut
284
359
+
Phe
GAA
[ENA]
¢þ
>WENV182998356
OLBT01001117
[OLBT] human gut metagenome; human gut
287
211
-
Arg
CCT
[ENA]
¢þ
>WENV182998424
OLBT01008893
[OLBT] human gut metagenome; human gut
293
368
+
Thr
TGT
[ENA]
¢þ
>WENV182998388
OLBT01002112
[OLBT] human gut metagenome; human gut
300
227
-
Asn
GTT
[ENA]
¢þ
>WENV182998416
OLBT01006462
[OLBT] human gut metagenome; human gut
301
217
-
Tyr
GTA
[ENA]
¢þ
>WENV182998419
OLBT01006751
[OLBT] human gut metagenome; human gut
318
403
+
Tyr
GTA
[ENA]
¢þ
>WENV182998422
OLBT01007310
[OLBT] human gut metagenome; human gut
337
261
-
Pro
CGG
[ENA]
¢þ
>WENV182998301
OLBT01000049
[OLBT] human gut metagenome; human gut
339
266
-
Phe
GAA
[ENA]
¢þ
>WENV182998404
OLBT01003391
[OLBT] human gut metagenome; human gut
342
424
+
Leu
TAG
[ENA]
¢þ
>WENV182998437
OLBT01012084
[OLBT] human gut metagenome; human gut
348
273
-
Asp
GTC
[ENA]
¢þ
>WENV182998372
OLBT01001772
[OLBT] human gut metagenome; human gut
357
282
-
Arg
TCT
[ENA]
¢þ
>WENV182998351
OLBT01001055
[OLBT] human gut metagenome; human gut
377
291
-
Leu
CAG
[ENA]
¢þ
>WENV182998377
OLBT01001882
[OLBT] human gut metagenome; human gut
382
456
+
Asn
GTT
[ENA]
¢þ
>WENV182998425
OLBT01008893
[OLBT] human gut metagenome; human gut
392
476
+
Tyr
GTA
[ENA]
¢þ
>WENV182998428
OLBT01010043
[OLBT] human gut metagenome; human gut
424
500
+
Arg
CCG
[ENA]
¢þ
>WENV182998436
OLBT01012084
[OLBT] human gut metagenome; human gut
427
352
-
Ile2
CAT
[ENA]
¢þ
>WENV182998423
OLBT01007891
[OLBT] human gut metagenome; human gut
444
529
+
Leu
CAA
[ENA]
¢þ
>WENV182998378
OLBT01001882
[OLBT] human gut metagenome; human gut
459
533
+
Glu
TTC
[ENA]
¢þ
>WENV182998429
OLBT01010066
[OLBT] human gut metagenome; human gut
477
404
-
Lys
CTT
[ENA]
¢þ
>WENV182998371
OLBT01001772
[OLBT] human gut metagenome; human gut
478
408
-
Gly
TCC
[ENA]
¢þ
>WENV182998426
OLBT01008893
[OLBT] human gut metagenome; human gut
481
556
+
fMet
CAT
[ENA]
¢þ
>WENV182998417
OLBT01006569
[OLBT] human gut metagenome; human gut
488
562
+
Ile
GAT
[ENA]
¢þ
>WENV182998414
OLBT01005451
[OLBT] human gut metagenome; human gut
497
413
-
Leu
AAG
[ENA]
¢þ
>WENV182998413
OLBT01005367
[OLBT] human gut metagenome; human gut
497
422
-
Asn
GTT
[ENA]
¢þ
>WENV182998435
OLBT01012084
[OLBT] human gut metagenome; human gut
503
431
-
Thr
TGT
[ENA]
¢þ
>WENV182998395
OLBT01002707
[OLBT] human gut metagenome; human gut
521
596
+
Thr
CGT
[ENA]
¢þ
>WENV182998379
OLBT01001882
[OLBT] human gut metagenome; human gut
543
618
+
Val
TAC
[ENA]
¢þ
>WENV182998430
OLBT01010235
[OLBT] human gut metagenome; human gut
547
473
-
Lys
CTT
[ENA]
¢þ
>WENV182998361
OLBT01001603
[OLBT] human gut metagenome; human gut
560
647
+
Ser
TGA
[ENA]
¢þ
>WENV182998407
OLBT01003754
[OLBT] human gut metagenome; human gut
572
497
-
Arg
ACG
[ENA]
¢þ
>WENV182998370
OLBT01001772
[OLBT] human gut metagenome; human gut
573
499
-
Pro
TGG
[ENA]
¢þ
>WENV182998400
OLBT01002923
[OLBT] human gut metagenome; human gut
583
511
-
Glu
CTC
[ENA]
¢þ
>WENV182998403
OLBT01003315
[OLBT] human gut metagenome; human gut
586
514
-
Ala
CGC
[ENA]
¢þ
>WENV182998387
OLBT01002112
[OLBT] human gut metagenome; human gut
612
522
-
Ser
GCT
[ENA]
¢þ
>WENV182998392
OLBT01002394
[OLBT] human gut metagenome; human gut
677
589
-
Leu
TAA
[ENA]
¢þ
>WENV182998366
OLBT01001658
[OLBT] human gut metagenome; human gut
723
797
+
Phe
GAA
[ENA]
¢þ
>WENV182998362
OLBT01001603
[OLBT] human gut metagenome; human gut
732
822
+
Ser
GGA
[ENA]
¢þ
>WENV182998412
OLBT01004453
[OLBT] human gut metagenome; human gut
763
687
-
Asp
GTC
[ENA]
¢þ
>WENV182998398
OLBT01002719
[OLBT] human gut metagenome; human gut
771
858
+
Ser
CGA
[ENA]
¢þ
>WENV182998391
OLBT01002394
[OLBT] human gut metagenome; human gut
777
703
-
Cys
GCA
[ENA]
¢þ
>WENV182998405
OLBT01003404
[OLBT] human gut metagenome; human gut
794
721
-
Lys
TTT
[ENA]
¢þ
>WENV182998367
OLBT01001658
[OLBT] human gut metagenome; human gut
832
905
+
Lys
TTT
[ENA]
¢þ
>WENV182998390
OLBT01002394
[OLBT] human gut metagenome; human gut
859
785
-
Gly
GCC
[ENA]
¢þ
>WENV182998393
OLBT01002405
[OLBT] human gut metagenome; human gut
940
1014
+
Ile2
CAT
[ENA]
¢þ
>WENV182998359
OLBT01001367
[OLBT] human gut metagenome; human gut
950
1026
+
Asp
GTC
[ENA]
¢þ
>WENV182998383
OLBT01001974
[OLBT] human gut metagenome; human gut
985
1061
+
Ile
GAT
[ENA]
¢þ
>WENV182998380
OLBT01001890
[OLBT] human gut metagenome; human gut
986
1057
+
Arg
CCG
[ENA]
¢þ
>WENV182998394
OLBT01002515
[OLBT] human gut metagenome; human gut
989
1076
+
Ser
CGA
[ENA]
¢þ
>WENV182998364
OLBT01001650
[OLBT] human gut metagenome; human gut
1005
1075
+
Gln
CTG
[ENA]
¢þ
>WENV182998386
OLBT01001983
[OLBT] human gut metagenome; human gut
1006
932
-
Ile
GAT
[ENA]
¢þ
>WENV182998348
OLBT01000891
[OLBT] human gut metagenome; human gut
1021
949
-
Thr
GGT
[ENA]
¢þ
>WENV182998399
OLBT01002853
[OLBT] human gut metagenome; human gut
1035
962
-
Arg
CCG
[ENA]
¢þ
>WENV182998368
OLBT01001658
[OLBT] human gut metagenome; human gut
1044
1124
+
Leu
TAG
[ENA]
¢þ
>WENV182998384
OLBT01001974
[OLBT] human gut metagenome; human gut
1104
1179
+
Ala
TGC
[ENA]
¢þ
>WENV182998365
OLBT01001650
[OLBT] human gut metagenome; human gut
1106
1180
+
Pro
CGG
[ENA]
¢þ
>WENV182998385
OLBT01001983
[OLBT] human gut metagenome; human gut
1120
1048
-
Asn
GTT
[ENA]
¢þ
>WENV182998382
OLBT01001963
[OLBT] human gut metagenome; human gut
1133
1059
-
Thr
GGT
[ENA]
¢þ
>WENV182998340
OLBT01000649
[OLBT] human gut metagenome; human gut
1134
1060
-
Ala
GGC
[ENA]
¢þ
>WENV182998354
OLBT01001091
[OLBT] human gut metagenome; human gut
1163
1234
+
Gln
TTG
[ENA]
¢þ
>WENV182998375
OLBT01001837
[OLBT] human gut metagenome; human gut
1197
1125
-
Cys
GCA
[ENA]
¢þ
>WENV182998381
OLBT01001963
[OLBT] human gut metagenome; human gut
1212
1139
-
Gly
TCC
[ENA]
¢þ
>WENV182998335
OLBT01000446
[OLBT] human gut metagenome; human gut
1288
1363
+
Glu
TTC
[ENA]
¢þ
>WENV182998349
OLBT01000971
[OLBT] human gut metagenome; human gut
1320
1402
+
Leu
CAG
[ENA]
¢þ
>WENV182998318
OLBT01000179
[OLBT] human gut metagenome; human gut
1351
1435
+
Leu
CAA
[ENA]
¢þ
>WENV182998334
OLBT01000389
[OLBT] human gut metagenome; human gut
1356
1281
-
Pro
CGG
[ENA]
¢þ
>WENV182998337
OLBT01000483
[OLBT] human gut metagenome; human gut
1383
1456
+
Lys
TTT
[ENA]
¢þ
>WENV182998330
OLBT01000368
[OLBT] human gut metagenome; human gut
1390
1477
+
Ser
GCT
[ENA]
¢þ
>WENV182998363
OLBT01001613
[OLBT] human gut metagenome; human gut
1440
1366
-
Gly
GCC
[ENA]
¢þ
>WENV182998331
OLBT01000368
[OLBT] human gut metagenome; human gut
1535
1607
+
Glu
CTC
[ENA]
¢þ
>WENV182998332
OLBT01000368
[OLBT] human gut metagenome; human gut
1624
1697
+
Lys
CTT
[ENA]
¢þ
>WENV182998350
OLBT01001016
[OLBT] human gut metagenome; human gut
1755
1684
-
Cys
GCA
[ENA]
¢þ
>WENV182998358
OLBT01001242
[OLBT] human gut metagenome; human gut
1786
1709
-
Arg
TCT
[ENA]
¢þ
>WENV182998353
OLBT01001079
[OLBT] human gut metagenome; human gut
1903
1975
+
Thr
GGT
[ENA]
¢þ
>WENV182998357
OLBT01001122
[OLBT] human gut metagenome; human gut
1954
1882
-
Arg
CCG
[ENA]
¢þ
>WENV182998333
OLBT01000389
[OLBT] human gut metagenome; human gut
2204
2129
-
Pro
TGG
[ENA]
¢þ
>WENV182998312
OLBT01000113
[OLBT] human gut metagenome; human gut
2457
2371
-
Ser
TGA
[ENA]
¢þ
>WENV182998346
OLBT01000861
[OLBT] human gut metagenome; human gut
2542
2617
+
Pro
GGG
[ENA]
¢þ
>WENV182998308
OLBT01000079
[OLBT] human gut metagenome; human gut
2672
2600
-
Glu
TTC
[ENA]
¢þ
>WENV182998347
OLBT01000863
[OLBT] human gut metagenome; human gut
2673
2746
+
Lys
CTT
[ENA]
¢þ
>WENV182998344
OLBT01000825
[OLBT] human gut metagenome; human gut
2702
2631
-
Gln
TTG
[ENA]
¢þ
>WENV182998324
OLBT01000241
[OLBT] human gut metagenome; human gut
3100
3025
-
Val
TAC
[ENA]
¢þ
>WENV182998338
OLBT01000558
[OLBT] human gut metagenome; human gut
3144
3216
+
Gly
CCC
[ENA]
¢þ
>WENV182998319
OLBT01000212
[OLBT] human gut metagenome; human gut
3226
3297
+
Gln
CTG
[ENA]
¢þ
>WENV182998323
OLBT01000241
[OLBT] human gut metagenome; human gut
3309
3235
-
Asn
GTT
[ENA]
¢þ
>WENV182998342
OLBT01000703
[OLBT] human gut metagenome; human gut
3375
3301
-
Asn
GTT
[ENA]
¢þ
>WENV182998339
OLBT01000572
[OLBT] human gut metagenome; human gut
3404
3321
-
Leu
TAG
[ENA]
¢þ
>WENV182998326
OLBT01000302
[OLBT] human gut metagenome; human gut
3944
4018
+
Thr
TGT
[ENA]
¢þ
>WENV182998327
OLBT01000302
[OLBT] human gut metagenome; human gut
4134
4217
+
Tyr
GTA
[ENA]
¢þ
>WENV182998298
OLBT01000025
[OLBT] human gut metagenome; human gut
5123
5041
-
Leu
TAG
[ENA]
¢þ
>WENV182998328
OLBT01000302
[OLBT] human gut metagenome; human gut
5751
5824
+
Trp
CCA
[ENA]
¢þ
>WENV182998311
OLBT01000113
[OLBT] human gut metagenome; human gut
5875
5947
+
Arg
CCT
[ENA]
¢þ
>WENV182998314
OLBT01000125
[OLBT] human gut metagenome; human gut
6040
6114
+
Met
CAT
[ENA]
¢þ
>WENV182998329
OLBT01000337
[OLBT] human gut metagenome; human gut
6225
6137
-
Ser
GGA
[ENA]
¢þ
>WENV182998285
OLBT01000003
[OLBT] human gut metagenome; human gut
6270
6342
+
fMet
CAT
[ENA]
¢þ
>WENV182998320
OLBT01000213
[OLBT] human gut metagenome; human gut
8143
8070
-
Thr
CGT
[ENA]
¢þ
>WENV182998322
OLBT01000223
[OLBT] human gut metagenome; human gut
8794
8882
+
Leu
GAG
[ENA]
¢þ
>WENV182998294
OLBT01000012
[OLBT] human gut metagenome; human gut
9349
9423
+
Thr
TGT
[ENA]
¢þ
>WENV182998316
OLBT01000128
[OLBT] human gut metagenome; human gut
9946
9874
-
Glu
TTC
[ENA]
¢þ
>WENV182998305
OLBT01000060
[OLBT] human gut metagenome; human gut
10910
10837
-
Lys
CTT
[ENA]
¢þ
>WENV182998317
OLBT01000157
[OLBT] human gut metagenome; human gut
11237
11164
-
fMet
CAT
[ENA]
¢þ
>WENV182998310
OLBT01000091
[OLBT] human gut metagenome; human gut
11315
11390
+
Gly
GCC
[ENA]
¢þ
>WENV182998313
OLBT01000114
[OLBT] human gut metagenome; human gut
12847
12931
+
Leu
CAA
[ENA]
¢þ
>WENV182998315
OLBT01000128
[OLBT] human gut metagenome; human gut
13442
13516
+
Pro
GGG
[ENA]
¢þ
>WENV182998309
OLBT01000088
[OLBT] human gut metagenome; human gut
14064
14138
+
Asp
GTC
[ENA]
¢þ
>WENV182998295
OLBT01000013
[OLBT] human gut metagenome; human gut
14597
14685
+
Ser
GGA
[ENA]
¢þ
>WENV182998303
OLBT01000055
[OLBT] human gut metagenome; human gut
16722
16647
-
His
GTG
[ENA]
¢þ
>WENV182998307
OLBT01000076
[OLBT] human gut metagenome; human gut
17880
17951
+
Gln
CTG
[ENA]
¢þ
>WENV182998297
OLBT01000023
[OLBT] human gut metagenome; human gut
22801
22729
-
Cys
GCA
[ENA]
¢þ
>WENV182998296
OLBT01000014
[OLBT] human gut metagenome; human gut
25447
25521
+
Arg
TCT
[ENA]
¢þ
>WENV182998288
OLBT01000008
[OLBT] human gut metagenome; human gut
26468
26395
-
Trp
CCA
[ENA]
¢þ
>WENV182998300
OLBT01000030
[OLBT] human gut metagenome; human gut
27581
27498
-
Tyr
GTA
[ENA]
¢þ
>WENV182998292
OLBT01000009
[OLBT] human gut metagenome; human gut
30265
30192
-
Trp
CCA
[ENA]
¢þ
>WENV182998291
OLBT01000009
[OLBT] human gut metagenome; human gut
31625
31553
-
Thr
GGT
[ENA]
¢þ
>WENV182998290
OLBT01000009
[OLBT] human gut metagenome; human gut
31724
31641
-
Tyr
GTA
[ENA]
¢þ
>WENV182998299
OLBT01000026
[OLBT] human gut metagenome; human gut
31840
31925
+
Ser
TGA
[ENA]
¢þ
>WENV182998289
OLBT01000009
[OLBT] human gut metagenome; human gut
31868
31794
-
Thr
TGT
[ENA]
¢þ
>WENV182998293
OLBT01000010
[OLBT] human gut metagenome; human gut
32900
32974
+
Gly
CCC
[ENA]
¢þ
>WENV182998287
OLBT01000006
[OLBT] human gut metagenome; human gut
58063
57991
-
Arg
CCT
[ENA]
¢þ
>WENV182998286
OLBT01000003
[OLBT] human gut metagenome; human gut
77410
77336
-
Sup
CTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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