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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
[OLBW] human gut metagenome; human gut
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182999069
OLBW01009837
[OLBW] human gut metagenome; human gut
74
149
+
Ala
GGC
[ENA]
¢þ
>WENV182999046
OLBW01003450
[OLBW] human gut metagenome; human gut
93
169
+
Val
TAC
[ENA]
¢þ
>WENV182999065
OLBW01008633
[OLBW] human gut metagenome; human gut
110
36
-
Glu
CTC
[ENA]
¢þ
>WENV182999024
OLBW01001297
[OLBW] human gut metagenome; human gut
110
181
+
Asn
GTT
[ENA]
¢þ
>WENV182999018
OLBW01000881
[OLBW] human gut metagenome; human gut
117
200
+
Leu
CAA
[ENA]
¢þ
>WENV182999058
OLBW01005761
[OLBW] human gut metagenome; human gut
134
50
-
Tyr
GTA
[ENA]
¢þ
>WENV182999063
OLBW01007247
[OLBW] human gut metagenome; human gut
179
105
-
Met
CAT
[ENA]
¢þ
>WENV182999067
OLBW01009186
[OLBW] human gut metagenome; human gut
192
117
-
His
GTG
[ENA]
¢þ
>WENV182999025
OLBW01001297
[OLBW] human gut metagenome; human gut
200
271
+
Cys
GCA
[ENA]
¢þ
>WENV182999064
OLBW01008633
[OLBW] human gut metagenome; human gut
221
146
-
Lys
CTT
[ENA]
¢þ
>WENV182999040
OLBW01002744
[OLBW] human gut metagenome; human gut
222
140
-
Leu
GAG
[ENA]
¢þ
>WENV182999048
OLBW01004181
[OLBW] human gut metagenome; human gut
235
162
-
fMet
CAT
[ENA]
¢þ
>WENV182999055
OLBW01005217
[OLBW] human gut metagenome; human gut
261
337
+
His
GTG
[ENA]
¢þ
>WENV182999066
OLBW01009186
[OLBW] human gut metagenome; human gut
274
198
-
Arg
TCT
[ENA]
¢þ
>WENV182999013
OLBW01000647
[OLBW] human gut metagenome; human gut
276
205
-
Glu
TTC
[ENA]
¢þ
>WENV182999045
OLBW01003420
[OLBW] human gut metagenome; human gut
291
363
+
Trp
CCA
[ENA]
¢þ
>WENV182998994
OLBW01000314
[OLBW] human gut metagenome; human gut
307
232
-
Gly
CCC
[ENA]
¢þ
>WENV182999057
OLBW01005689
[OLBW] human gut metagenome; human gut
317
393
+
Arg
CCG
[ENA]
¢þ
>WENV182999049
OLBW01004256
[OLBW] human gut metagenome; human gut
327
244
-
Leu
TAA
[ENA]
¢þ
>WENV182999041
OLBW01002876
[OLBW] human gut metagenome; human gut
332
407
+
Lys
CTT
[ENA]
¢þ
>WENV182999052
OLBW01004787
[OLBW] human gut metagenome; human gut
354
428
+
Gly
TCC
[ENA]
¢þ
>WENV182999061
OLBW01007048
[OLBW] human gut metagenome; human gut
368
292
-
fMet
CAT
[ENA]
¢þ
>WENV182999028
OLBW01001675
[OLBW] human gut metagenome; human gut
368
295
-
Pro
CGG
[ENA]
¢þ
>WENV182999020
OLBW01001197
[OLBW] human gut metagenome; human gut
379
465
+
Leu
AAG
[ENA]
¢þ
>WENV182999068
OLBW01009470
[OLBW] human gut metagenome; human gut
410
335
-
Arg
CCT
[ENA]
¢þ
>WENV182999021
OLBW01001205
[OLBW] human gut metagenome; human gut
428
499
+
Gln
TTG
[ENA]
¢þ
>WENV182999012
OLBW01000647
[OLBW] human gut metagenome; human gut
444
368
-
Met
CAT
[ENA]
¢þ
>WENV182999001
OLBW01000511
[OLBW] human gut metagenome; human gut
460
533
+
Gly
GCC
[ENA]
¢þ
>WENV182999054
OLBW01005049
[OLBW] human gut metagenome; human gut
477
405
-
Glu
TTC
[ENA]
¢þ
>WENV182999037
OLBW01002498
[OLBW] human gut metagenome; human gut
479
405
-
Ile2
CAT
[ENA]
¢þ
>WENV182999059
OLBW01006056
[OLBW] human gut metagenome; human gut
495
586
+
Ser
GGA
[ENA]
¢þ
>WENV182999027
OLBW01001675
[OLBW] human gut metagenome; human gut
549
624
+
Phe
GAA
[ENA]
¢þ
>WENV182999062
OLBW01007214
[OLBW] human gut metagenome; human gut
579
660
+
Leu
TAG
[ENA]
¢þ
>WENV182999031
OLBW01001939
[OLBW] human gut metagenome; human gut
581
655
+
Val
TAC
[ENA]
¢þ
>WENV182999034
OLBW01002088
[OLBW] human gut metagenome; human gut
581
668
+
Ser
TGA
[ENA]
¢þ
>WENV182999030
OLBW01001908
[OLBW] human gut metagenome; human gut
606
535
-
Thr
GGT
[ENA]
¢þ
>WENV182999050
OLBW01004577
[OLBW] human gut metagenome; human gut
621
694
+
Gly
GCC
[ENA]
¢þ
>WENV182999060
OLBW01006591
[OLBW] human gut metagenome; human gut
634
721
+
Ser
GCT
[ENA]
¢þ
>WENV182999038
OLBW01002534
[OLBW] human gut metagenome; human gut
646
720
+
Glu
CTC
[ENA]
¢þ
>WENV182999043
OLBW01003010
[OLBW] human gut metagenome; human gut
651
577
-
Ile
GAT
[ENA]
¢þ
>WENV182999032
OLBW01001939
[OLBW] human gut metagenome; human gut
659
744
+
Leu
TAA
[ENA]
¢þ
>WENV182999056
OLBW01005430
[OLBW] human gut metagenome; human gut
670
587
-
Tyr
GTA
[ENA]
¢þ
>WENV182999035
OLBW01002088
[OLBW] human gut metagenome; human gut
701
794
+
Ser
GCT
[ENA]
¢þ
>WENV182999051
OLBW01004577
[OLBW] human gut metagenome; human gut
741
824
+
Leu
CAG
[ENA]
¢þ
>WENV182999039
OLBW01002534
[OLBW] human gut metagenome; human gut
762
838
+
Asn
GTT
[ENA]
¢þ
>WENV182999053
OLBW01004992
[OLBW] human gut metagenome; human gut
764
689
-
Pro
TGG
[ENA]
¢þ
>WENV182999010
OLBW01000576
[OLBW] human gut metagenome; human gut
775
684
-
Ser
CGA
[ENA]
¢þ
>WENV182999033
OLBW01001939
[OLBW] human gut metagenome; human gut
795
870
+
Arg
ACG
[ENA]
¢þ
>WENV182999029
OLBW01001846
[OLBW] human gut metagenome; human gut
865
777
-
Ser
GGA
[ENA]
¢þ
>WENV182999044
OLBW01003392
[OLBW] human gut metagenome; human gut
882
807
-
Thr
CGT
[ENA]
¢þ
>WENV182999036
OLBW01002325
[OLBW] human gut metagenome; human gut
886
812
-
Ala
GGC
[ENA]
¢þ
>WENV182998995
OLBW01000338
[OLBW] human gut metagenome; human gut
903
985
+
Leu
TAG
[ENA]
¢þ
>WENV182999047
OLBW01003475
[OLBW] human gut metagenome; human gut
908
981
+
Thr
CGT
[ENA]
¢þ
>WENV182999042
OLBW01002913
[OLBW] human gut metagenome; human gut
998
918
-
Leu
TAG
[ENA]
¢þ
>WENV182999002
OLBW01000524
[OLBW] human gut metagenome; human gut
1052
1127
+
Pro
TGG
[ENA]
¢þ
>WENV182999006
OLBW01000559
[OLBW] human gut metagenome; human gut
1105
1180
+
Trp
CCA
[ENA]
¢þ
>WENV182999003
OLBW01000524
[OLBW] human gut metagenome; human gut
1133
1203
+
Gly
TCC
[ENA]
¢þ
>WENV182999005
OLBW01000552
[OLBW] human gut metagenome; human gut
1238
1164
-
Arg
CCG
[ENA]
¢þ
>WENV182999007
OLBW01000559
[OLBW] human gut metagenome; human gut
1465
1541
+
Asp
GTC
[ENA]
¢þ
>WENV182998985
OLBW01000092
[OLBW] human gut metagenome; human gut
1509
1421
-
Ser
GCT
[ENA]
¢þ
>WENV182999026
OLBW01001600
[OLBW] human gut metagenome; human gut
1556
1471
-
Leu
CAG
[ENA]
¢þ
>WENV182999016
OLBW01000847
[OLBW] human gut metagenome; human gut
1566
1639
+
Pro
CGG
[ENA]
¢þ
>WENV182999023
OLBW01001214
[OLBW] human gut metagenome; human gut
1616
1541
-
Pro
CGG
[ENA]
¢þ
>WENV182999008
OLBW01000559
[OLBW] human gut metagenome; human gut
1628
1703
+
Gly
GCC
[ENA]
¢þ
>WENV182999022
OLBW01001214
[OLBW] human gut metagenome; human gut
1718
1645
-
Gln
CTG
[ENA]
¢þ
>WENV182998997
OLBW01000396
[OLBW] human gut metagenome; human gut
1730
1802
+
Arg
CCT
[ENA]
¢þ
>WENV182999009
OLBW01000559
[OLBW] human gut metagenome; human gut
1732
1806
+
Cys
GCA
[ENA]
¢þ
>WENV182999000
OLBW01000468
[OLBW] human gut metagenome; human gut
1761
1688
-
Trp
CCA
[ENA]
¢þ
>WENV182999004
OLBW01000544
[OLBW] human gut metagenome; human gut
1762
1687
-
Val
GAC
[ENA]
¢þ
>WENV182999019
OLBW01001164
[OLBW] human gut metagenome; human gut
1791
1716
-
Ala
GGC
[ENA]
¢þ
>WENV182999015
OLBW01000753
[OLBW] human gut metagenome; human gut
1898
1973
+
Ile2
CAT
[ENA]
¢þ
>WENV182999017
OLBW01000866
[OLBW] human gut metagenome; human gut
1922
1837
-
Ser
TGA
[ENA]
¢þ
>WENV182998993
OLBW01000273
[OLBW] human gut metagenome; human gut
2094
2168
+
Asn
GTT
[ENA]
¢þ
>WENV182998998
OLBW01000427
[OLBW] human gut metagenome; human gut
2116
2042
-
Lys
CTT
[ENA]
¢þ
>WENV182999014
OLBW01000654
[OLBW] human gut metagenome; human gut
2159
2232
+
Lys
TTT
[ENA]
¢þ
>WENV182998988
OLBW01000169
[OLBW] human gut metagenome; human gut
2232
2306
+
Thr
TGT
[ENA]
¢þ
>WENV182998996
OLBW01000350
[OLBW] human gut metagenome; human gut
2314
2242
-
Gln
CTG
[ENA]
¢þ
>WENV182998989
OLBW01000169
[OLBW] human gut metagenome; human gut
2391
2474
+
Tyr
GTA
[ENA]
¢þ
>WENV182999011
OLBW01000590
[OLBW] human gut metagenome; human gut
2401
2474
+
Arg
CCT
[ENA]
¢þ
>WENV182998992
OLBW01000254
[OLBW] human gut metagenome; human gut
2422
2496
+
Phe
GAA
[ENA]
¢þ
>WENV182998990
OLBW01000169
[OLBW] human gut metagenome; human gut
2490
2562
+
Thr
GGT
[ENA]
¢þ
>WENV182998999
OLBW01000456
[OLBW] human gut metagenome; human gut
2573
2501
-
Glu
CTC
[ENA]
¢þ
>WENV182998986
OLBW01000137
[OLBW] human gut metagenome; human gut
3589
3663
+
Ile
GAT
[ENA]
¢þ
>WENV182998987
OLBW01000137
[OLBW] human gut metagenome; human gut
3680
3754
+
Ala
TGC
[ENA]
¢þ
>WENV182998991
OLBW01000201
[OLBW] human gut metagenome; human gut
3820
3744
-
Arg
CCT
[ENA]
¢þ
>WENV182998983
OLBW01000028
[OLBW] human gut metagenome; human gut
5960
6032
+
Phe
GAA
[ENA]
¢þ
>WENV182998984
OLBW01000028
[OLBW] human gut metagenome; human gut
6046
6120
+
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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