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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OLCC] human gut metagenome; human gut
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183000018
OLCC01001981
[OLCC] human gut metagenome; human gut
2
88
+
Leu
AAG
[ENA]
¢þ
>WENV183000009
OLCC01001328
[OLCC] human gut metagenome; human gut
45
117
+
Thr
GGT
[ENA]
¢þ
>WENV183000042
OLCC01004307
[OLCC] human gut metagenome; human gut
78
2
-
Asp
GTC
[ENA]
¢þ
>WENV183000031
OLCC01003777
[OLCC] human gut metagenome; human gut
79
6
-
Ala
CGC
[ENA]
¢þ
>WENV183000019
OLCC01002251
[OLCC] human gut metagenome; human gut
88
179
+
Ser
CGA
[ENA]
¢þ
>WENV182999999
OLCC01000902
[OLCC] human gut metagenome; human gut
91
166
+
Arg
ACG
[ENA]
¢þ
>WENV183000003
OLCC01001130
[OLCC] human gut metagenome; human gut
100
176
+
Arg
CCT
[ENA]
¢þ
>WENV183000007
OLCC01001170
[OLCC] human gut metagenome; human gut
102
187
+
Leu
CAG
[ENA]
¢þ
>WENV183000054
OLCC01008285
[OLCC] human gut metagenome; human gut
111
37
-
Ile2
CAT
[ENA]
¢þ
>WENV183000051
OLCC01007786
[OLCC] human gut metagenome; human gut
115
191
+
Arg
CCG
[ENA]
¢þ
>WENV183000029
OLCC01003468
[OLCC] human gut metagenome; human gut
134
58
-
Asp
GTC
[ENA]
¢þ
>WENV183000039
OLCC01004208
[OLCC] human gut metagenome; human gut
144
219
+
Pro
GGG
[ENA]
¢þ
>WENV183000034
OLCC01003958
[OLCC] human gut metagenome; human gut
147
74
-
Lys
CTT
[ENA]
¢þ
>WENV182999993
OLCC01000313
[OLCC] human gut metagenome; human gut
155
71
-
Leu
GAG
[ENA]
¢þ
>WENV183000041
OLCC01004307
[OLCC] human gut metagenome; human gut
158
83
-
Trp
CCA
[ENA]
¢þ
>WENV183000035
OLCC01003985
[OLCC] human gut metagenome; human gut
163
237
+
Arg
CCG
[ENA]
¢þ
>WENV183000050
OLCC01007545
[OLCC] human gut metagenome; human gut
163
238
+
Thr
CGT
[ENA]
¢þ
>WENV183000021
OLCC01002580
[OLCC] human gut metagenome; human gut
185
258
+
fMet
CAT
[ENA]
¢þ
>WENV183000058
OLCC01009892
[OLCC] human gut metagenome; human gut
192
109
-
Leu
CAA
[ENA]
¢þ
>WENV183000027
OLCC01003427
[OLCC] human gut metagenome; human gut
196
273
+
Ile
GAT
[ENA]
¢þ
>WENV183000011
OLCC01001607
[OLCC] human gut metagenome; human gut
200
277
+
Arg
CCT
[ENA]
¢þ
>WENV183000002
OLCC01001069
[OLCC] human gut metagenome; human gut
207
136
-
Thr
GGT
[ENA]
¢þ
>WENV182999975
OLCC01000061
[OLCC] human gut metagenome; human gut
220
133
-
Ser
GCT
[ENA]
¢þ
>WENV183000030
OLCC01003541
[OLCC] human gut metagenome; human gut
220
138
-
Leu
TAG
[ENA]
¢þ
>WENV183000038
OLCC01004178
[OLCC] human gut metagenome; human gut
229
144
-
Ser
TGA
[ENA]
¢þ
>WENV183000032
OLCC01003779
[OLCC] human gut metagenome; human gut
238
154
-
Leu
CAA
[ENA]
¢þ
>WENV183000028
OLCC01003468
[OLCC] human gut metagenome; human gut
239
164
-
Gly
GCC
[ENA]
¢þ
>WENV183000033
OLCC01003958
[OLCC] human gut metagenome; human gut
244
171
-
Lys
CTT
[ENA]
¢þ
>WENV182999992
OLCC01000313
[OLCC] human gut metagenome; human gut
259
178
-
Leu
CAG
[ENA]
¢þ
>WENV183000016
OLCC01001979
[OLCC] human gut metagenome; human gut
269
342
+
Gln
CTG
[ENA]
¢þ
>WENV183000053
OLCC01008096
[OLCC] human gut metagenome; human gut
289
362
+
Lys
TTT
[ENA]
¢þ
>WENV183000056
OLCC01009374
[OLCC] human gut metagenome; human gut
310
385
+
Arg
TCT
[ENA]
¢þ
>WENV182999981
OLCC01000232
[OLCC] human gut metagenome; human gut
315
388
+
Gly
GCC
[ENA]
¢þ
>WENV183000055
OLCC01008487
[OLCC] human gut metagenome; human gut
354
281
-
Pro
CGG
[ENA]
¢þ
>WENV183000014
OLCC01001813
[OLCC] human gut metagenome; human gut
355
442
+
Ser
TGA
[ENA]
¢þ
>WENV183000023
OLCC01003106
[OLCC] human gut metagenome; human gut
362
436
+
Val
TAC
[ENA]
¢þ
>WENV183000043
OLCC01004429
[OLCC] human gut metagenome; human gut
363
438
+
Ala
GGC
[ENA]
¢þ
>WENV183000017
OLCC01001979
[OLCC] human gut metagenome; human gut
377
450
+
Pro
CGG
[ENA]
¢þ
>WENV182999991
OLCC01000313
[OLCC] human gut metagenome; human gut
379
306
-
Gly
GCC
[ENA]
¢þ
>WENV183000057
OLCC01009374
[OLCC] human gut metagenome; human gut
392
467
+
His
GTG
[ENA]
¢þ
>WENV183000049
OLCC01007056
[OLCC] human gut metagenome; human gut
424
498
+
Gly
TCC
[ENA]
¢þ
>WENV183000004
OLCC01001164
[OLCC] human gut metagenome; human gut
430
503
+
Glu
TTC
[ENA]
¢þ
>WENV183000048
OLCC01006022
[OLCC] human gut metagenome; human gut
438
512
+
Thr
TGT
[ENA]
¢þ
>WENV183000044
OLCC01004521
[OLCC] human gut metagenome; human gut
451
366
-
Tyr
GTA
[ENA]
¢þ
>WENV183000024
OLCC01003106
[OLCC] human gut metagenome; human gut
458
532
+
Met
CAT
[ENA]
¢þ
>WENV183000047
OLCC01005669
[OLCC] human gut metagenome; human gut
468
391
-
Thr
TGT
[ENA]
¢þ
>WENV183000052
OLCC01008003
[OLCC] human gut metagenome; human gut
472
401
-
Gln
TTG
[ENA]
¢þ
>WENV183000015
OLCC01001813
[OLCC] human gut metagenome; human gut
475
568
+
Ser
GCT
[ENA]
¢þ
>WENV183000037
OLCC01004100
[OLCC] human gut metagenome; human gut
507
591
+
Leu
CAG
[ENA]
¢þ
>WENV183000020
OLCC01002447
[OLCC] human gut metagenome; human gut
539
459
-
Leu
TAG
[ENA]
¢þ
>WENV183000005
OLCC01001164
[OLCC] human gut metagenome; human gut
547
619
+
Thr
TGT
[ENA]
¢þ
>WENV183000036
OLCC01004038
[OLCC] human gut metagenome; human gut
588
500
-
Ser
GGA
[ENA]
¢þ
>WENV183000013
OLCC01001726
[OLCC] human gut metagenome; human gut
591
508
-
Tyr
GTA
[ENA]
¢þ
>WENV183000025
OLCC01003123
[OLCC] human gut metagenome; human gut
611
687
+
fMet
CAT
[ENA]
¢þ
>WENV183000045
OLCC01004922
[OLCC] human gut metagenome; human gut
628
703
+
Pro
TGG
[ENA]
¢þ
>WENV183000006
OLCC01001164
[OLCC] human gut metagenome; human gut
648
731
+
Tyr
GTA
[ENA]
¢þ
>WENV182999998
OLCC01000882
[OLCC] human gut metagenome; human gut
690
764
+
Asn
GTT
[ENA]
¢þ
>WENV183000012
OLCC01001726
[OLCC] human gut metagenome; human gut
708
634
-
Thr
TGT
[ENA]
¢þ
>WENV183000046
OLCC01005269
[OLCC] human gut metagenome; human gut
733
658
-
Gly
CCC
[ENA]
¢þ
>WENV183000026
OLCC01003293
[OLCC] human gut metagenome; human gut
733
660
-
Gln
TTG
[ENA]
¢þ
>WENV183000040
OLCC01004304
[OLCC] human gut metagenome; human gut
747
820
+
Arg
CCT
[ENA]
¢þ
>WENV182999994
OLCC01000316
[OLCC] human gut metagenome; human gut
937
1010
+
Lys
CTT
[ENA]
¢þ
>WENV183000022
OLCC01003012
[OLCC] human gut metagenome; human gut
998
925
-
Trp
CCA
[ENA]
¢þ
>WENV183000001
OLCC01000949
[OLCC] human gut metagenome; human gut
1056
983
-
Pro
CGG
[ENA]
¢þ
>WENV183000010
OLCC01001441
[OLCC] human gut metagenome; human gut
1116
1044
-
Arg
CCT
[ENA]
¢þ
>WENV183000008
OLCC01001263
[OLCC] human gut metagenome; human gut
1194
1265
+
Gln
TTG
[ENA]
¢þ
>WENV183000000
OLCC01000949
[OLCC] human gut metagenome; human gut
1237
1312
+
Phe
GAA
[ENA]
¢þ
>WENV182999979
OLCC01000175
[OLCC] human gut metagenome; human gut
1444
1530
+
Ser
TGA
[ENA]
¢þ
>WENV182999996
OLCC01000374
[OLCC] human gut metagenome; human gut
1535
1459
-
Arg
ACG
[ENA]
¢þ
>WENV182999980
OLCC01000175
[OLCC] human gut metagenome; human gut
1538
1610
+
Gln
CTG
[ENA]
¢þ
>WENV182999978
OLCC01000170
[OLCC] human gut metagenome; human gut
1572
1498
-
Ala
TGC
[ENA]
¢þ
>WENV182999985
OLCC01000296
[OLCC] human gut metagenome; human gut
1586
1661
+
Pro
TGG
[ENA]
¢þ
>WENV182999977
OLCC01000170
[OLCC] human gut metagenome; human gut
1663
1589
-
Ile
GAT
[ENA]
¢þ
>WENV182999986
OLCC01000296
[OLCC] human gut metagenome; human gut
1667
1737
+
Gly
TCC
[ENA]
¢þ
>WENV182999987
OLCC01000296
[OLCC] human gut metagenome; human gut
1768
1843
+
Arg
TCT
[ENA]
¢þ
>WENV182999997
OLCC01000432
[OLCC] human gut metagenome; human gut
1824
1896
+
Thr
CGT
[ENA]
¢þ
>WENV182999988
OLCC01000296
[OLCC] human gut metagenome; human gut
1890
1964
+
His
GTG
[ENA]
¢þ
>WENV182999983
OLCC01000264
[OLCC] human gut metagenome; human gut
2004
1921
-
Leu
CAA
[ENA]
¢þ
>WENV182999989
OLCC01000296
[OLCC] human gut metagenome; human gut
2032
2103
+
Gln
TTG
[ENA]
¢þ
>WENV182999995
OLCC01000368
[OLCC] human gut metagenome; human gut
2044
1972
-
Glu
CTC
[ENA]
¢þ
>WENV182999990
OLCC01000296
[OLCC] human gut metagenome; human gut
2120
2194
+
Lys
TTT
[ENA]
¢þ
>WENV182999984
OLCC01000295
[OLCC] human gut metagenome; human gut
2523
2451
-
Glu
TTC
[ENA]
¢þ
>WENV182999982
OLCC01000239
[OLCC] human gut metagenome; human gut
2629
2704
+
Thr
GGT
[ENA]
¢þ
>WENV182999976
OLCC01000096
[OLCC] human gut metagenome; human gut
3494
3418
-
Val
CAC
[ENA]
¢þ
>WENV182999973
OLCC01000013
[OLCC] human gut metagenome; human gut
5835
5909
+
Glu
CTC
[ENA]
¢þ
>WENV182999974
OLCC01000013
[OLCC] human gut metagenome; human gut
5913
5988
+
Lys
CTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK