This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLCG] human gut metagenome; human gut
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183000647
OLCG01002549
[OLCG] human gut metagenome; human gut
50
123
+
fMet
CAT
[ENA]
¢þ
>WENV183000659
OLCG01005504
[OLCG] human gut metagenome; human gut
56
141
+
Ser
TGA
[ENA]
¢þ
>WENV183000631
OLCG01000764
[OLCG] human gut metagenome; human gut
58
133
+
Thr
GGT
[ENA]
¢þ
>WENV183000660
OLCG01005585
[OLCG] human gut metagenome; human gut
155
80
-
Thr
GGT
[ENA]
¢þ
>WENV183000657
OLCG01004916
[OLCG] human gut metagenome; human gut
159
83
-
Arg
CCG
[ENA]
¢þ
>WENV183000653
OLCG01003823
[OLCG] human gut metagenome; human gut
164
238
+
Arg
CCT
[ENA]
¢þ
>WENV183000641
OLCG01001454
[OLCG] human gut metagenome; human gut
183
101
-
Leu
TAG
[ENA]
¢þ
>WENV183000652
OLCG01003690
[OLCG] human gut metagenome; human gut
191
115
-
Met
CAT
[ENA]
¢þ
>WENV183000622
OLCG01000031
[OLCG] human gut metagenome; human gut
195
119
-
Asn
GTT
[ENA]
¢þ
>WENV183000630
OLCG01000582
[OLCG] human gut metagenome; human gut
214
288
+
Ile2
CAT
[ENA]
¢þ
>WENV183000645
OLCG01002014
[OLCG] human gut metagenome; human gut
242
314
+
Glu
TTC
[ENA]
¢þ
>WENV183000638
OLCG01001359
[OLCG] human gut metagenome; human gut
249
323
+
Thr
TGT
[ENA]
¢þ
>WENV183000635
OLCG01001348
[OLCG] human gut metagenome; human gut
255
329
+
Lys
CTT
[ENA]
¢þ
>WENV183000658
OLCG01005210
[OLCG] human gut metagenome; human gut
275
361
+
Leu
CAA
[ENA]
¢þ
>WENV183000621
OLCG01000031
[OLCG] human gut metagenome; human gut
309
235
-
Glu
CTC
[ENA]
¢þ
>WENV183000633
OLCG01000950
[OLCG] human gut metagenome; human gut
320
404
+
Leu
CAA
[ENA]
¢þ
>WENV183000655
OLCG01004510
[OLCG] human gut metagenome; human gut
322
407
+
Tyr
GTA
[ENA]
¢þ
>WENV183000644
OLCG01001672
[OLCG] human gut metagenome; human gut
327
399
+
Arg
CCT
[ENA]
¢þ
>WENV183000636
OLCG01001348
[OLCG] human gut metagenome; human gut
336
407
+
Thr
TGT
[ENA]
¢þ
>WENV183000639
OLCG01001359
[OLCG] human gut metagenome; human gut
366
449
+
Tyr
GTA
[ENA]
¢þ
>WENV183000654
OLCG01004331
[OLCG] human gut metagenome; human gut
368
294
-
Ala
GGC
[ENA]
¢þ
>WENV183000643
OLCG01001635
[OLCG] human gut metagenome; human gut
384
296
-
Ser
GGA
[ENA]
¢þ
>WENV183000642
OLCG01001494
[OLCG] human gut metagenome; human gut
388
463
+
Pro
GGG
[ENA]
¢þ
>WENV183000649
OLCG01003079
[OLCG] human gut metagenome; human gut
406
479
+
Phe
GAA
[ENA]
¢þ
>WENV183000656
OLCG01004824
[OLCG] human gut metagenome; human gut
427
356
-
Glu
TTC
[ENA]
¢þ
>WENV183000637
OLCG01001348
[OLCG] human gut metagenome; human gut
438
514
+
fMet
CAT
[ENA]
¢þ
>WENV183000651
OLCG01003507
[OLCG] human gut metagenome; human gut
471
398
-
Val
GAC
[ENA]
¢þ
>WENV183000661
OLCG01005650
[OLCG] human gut metagenome; human gut
479
403
-
Ala
CGC
[ENA]
¢þ
>WENV183000650
OLCG01003079
[OLCG] human gut metagenome; human gut
491
564
+
Pro
CGG
[ENA]
¢þ
>WENV183000646
OLCG01002122
[OLCG] human gut metagenome; human gut
552
479
-
Trp
CCA
[ENA]
¢þ
>WENV183000640
OLCG01001359
[OLCG] human gut metagenome; human gut
565
637
+
Thr
GGT
[ENA]
¢þ
>WENV183000648
OLCG01002978
[OLCG] human gut metagenome; human gut
674
599
-
Trp
CCA
[ENA]
¢þ
>WENV183000629
OLCG01000570
[OLCG] human gut metagenome; human gut
779
851
+
Arg
CCT
[ENA]
¢þ
>WENV183000632
OLCG01000925
[OLCG] human gut metagenome; human gut
798
870
+
Cys
GCA
[ENA]
¢þ
>WENV183000628
OLCG01000462
[OLCG] human gut metagenome; human gut
835
909
+
Asn
GTT
[ENA]
¢þ
>WENV183000634
OLCG01001130
[OLCG] human gut metagenome; human gut
937
1010
+
Gly
CCC
[ENA]
¢þ
>WENV183000625
OLCG01000276
[OLCG] human gut metagenome; human gut
1064
993
-
Gln
TTG
[ENA]
¢þ
>WENV183000627
OLCG01000413
[OLCG] human gut metagenome; human gut
1578
1504
-
His
GTG
[ENA]
¢þ
>WENV183000623
OLCG01000066
[OLCG] human gut metagenome; human gut
1686
1762
+
Ile
GAT
[ENA]
¢þ
>WENV183000626
OLCG01000344
[OLCG] human gut metagenome; human gut
1772
1699
-
Lys
TTT
[ENA]
¢þ
>WENV183000624
OLCG01000066
[OLCG] human gut metagenome; human gut
1791
1865
+
Ala
TGC
[ENA]
¢þ
>WENV183000619
OLCG01000013
[OLCG] human gut metagenome; human gut
2169
2244
+
Glu
TTC
[ENA]
¢þ
>WENV183000620
OLCG01000013
[OLCG] human gut metagenome; human gut
5610
5686
+
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK